|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
# | Reference Title | Reference Citation |
1. | GOAs Human GO annotations | GOA_HUMAN data from the GO Consortium |
2. | Type VI collagen mutations in Bethlem myopathy, an autosomal dominant myopathy with contractures. | Jobsis GJ, etal., Nat Genet. 1996 Sep;14(1):113-5. |
3. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
4. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
5. | PID Annotation Import Pipeline | Pipeline to import Pathway Interaction Database annotations from NCI into RGD |
6. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
7. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
8. | RGD HPO Phenotype Annotation Pipeline | RGD automated import pipeline for human HPO-to-gene-to-disease annotations |
9. | Type VI collagen gene expression in experimental liver fibrosis: quantitation and spatial distribution of mRNAs, and immunodetection of the protein. | Takahara T, etal., Liver. 1995 Apr;15(2):78-86. |
10. | Transcriptome analysis of bronchoalveolar lavage fluid from children with severe Mycoplasma pneumoniae pneumonia reveals novel gene expression and immunodeficiency. | Wang K, etal., Hum Genomics. 2017 Mar 16;11(1):4. doi: 10.1186/s40246-017-0101-y. |
11. | Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. | Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363. |
PMID:1544908 | PMID:1556127 | PMID:1602151 | PMID:1690728 | PMID:1765372 | PMID:2551668 | PMID:3198591 | PMID:3348212 | PMID:3665927 | PMID:6852033 | PMID:8168508 | PMID:8305732 |
PMID:9099729 | PMID:9334230 | PMID:10830953 | PMID:11381124 | PMID:11865138 | PMID:12011280 | PMID:12176987 | PMID:12218063 | PMID:12297580 | PMID:12374585 | PMID:12477932 | PMID:12812986 |
PMID:12840783 | PMID:14702039 | PMID:14981181 | PMID:15146197 | PMID:15489334 | PMID:15563506 | PMID:16075202 | PMID:16141002 | PMID:17602442 | PMID:18029348 | PMID:18366090 | PMID:18400749 |
PMID:18852439 | PMID:19199708 | PMID:19204726 | PMID:19299420 | PMID:19309692 | PMID:19698785 | PMID:20106987 | PMID:20301468 | PMID:20301676 | PMID:20302629 | PMID:20551380 | PMID:21873635 |
PMID:21988832 | PMID:22261194 | PMID:23138527 | PMID:23452080 | PMID:23658023 | PMID:23686814 | PMID:23869615 | PMID:24443028 | PMID:24769233 | PMID:24801232 | PMID:25037231 | PMID:25204870 |
PMID:25533456 | PMID:26186194 | PMID:26944560 | PMID:27068509 | PMID:27559042 | PMID:27563703 | PMID:28327460 | PMID:28344315 | PMID:28514442 | PMID:28675934 | PMID:29656893 | PMID:29872149 |
PMID:30021884 | PMID:32053901 | PMID:32350230 | PMID:33537799 | PMID:33961781 | PMID:33982770 | PMID:36215168 | PMID:36292982 | PMID:36521657 | PMID:36982625 | PMID:38777146 | PMID:38860406 |
COL6A2 (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Col6a2 (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Col6a2 (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Col6a2 (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
COL6A2 (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
COL6A2 (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Col6a2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
COL6A2 (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
COL6A2 (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Col6a2 (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in COL6A2
1815 total Variants |
Name | Type | Condition(s) | Position(s) | Clinical significance |
NM_001849.4(COL6A2):c.2773A>C (p.Ile925Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV000547454] | Chr21:46132265 [GRCh38] Chr21:47552179 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.3004T>C (p.Tyr1002His) | single nucleotide variant | Bethlem myopathy 1A [RCV000548034]|not provided [RCV000595329] | Chr21:46132496 [GRCh38] Chr21:47552410 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1459-2A>G | single nucleotide variant | Bethlem myopathy 1A [RCV000550156]|Ullrich congenital muscular dystrophy 1B [RCV003767089] | Chr21:46121554 [GRCh38] Chr21:47541468 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.2334C>A (p.Asp778Glu) | single nucleotide variant | Bethlem myopathy 1A [RCV000558700] | Chr21:46126149 [GRCh38] Chr21:47546063 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1078G>T (p.Ala360Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV000541866] | Chr21:46117898 [GRCh38] Chr21:47537812 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1000-6C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001422406] | Chr21:46117394 [GRCh38] Chr21:47537308 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.1651AAAGGAGAG[3] (p.551KGE[3]) | microsatellite | Bethlem myopathy 1A [RCV003517217]|not provided [RCV000523676] | Chr21:46122915..46122916 [GRCh38] Chr21:47542829..47542830 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2048C>T (p.Ser683Phe) | single nucleotide variant | Bethlem myopathy 1A [RCV003517219]|not provided [RCV000522324] | Chr21:46125863 [GRCh38] Chr21:47545777 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1856_1861del (p.Val619_Ile620del) | deletion | Ullrich congenital muscular dystrophy 1B [RCV003764644] | Chr21:46125501..46125506 [GRCh38] Chr21:47545415..47545420 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1771-1G>T | single nucleotide variant | Ullrich congenital muscular dystrophy 1B [RCV003764645] | Chr21:46125265 [GRCh38] Chr21:47545179 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1870G>A (p.Glu624Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000822059]|Ullrich congenital muscular dystrophy 1B [RCV003764618]|not provided [RCV000726381] | Chr21:46125518 [GRCh38] Chr21:47545432 [GRCh37] Chr21:21q22.3 |
pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.2626C>A (p.Arg876Ser) | single nucleotide variant | Ullrich congenital muscular dystrophy 1B [RCV003764619] | Chr21:46132118 [GRCh38] Chr21:47552032 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1096C>T (p.Arg366Ter) | single nucleotide variant | BETHLEM MYOPATHY 1B, AUTOSOMAL RECESSIVE [RCV003764621]|Bethlem myopathy 1A [RCV000796659]|not provided [RCV000254747] | Chr21:46117916 [GRCh38] Chr21:47537830 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.2611G>A (p.Asp871Asn) | single nucleotide variant | BETHLEM MYOPATHY 1B, AUTOSOMAL RECESSIVE [RCV003764622]|Bethlem myopathy 1A [RCV001054018]|Collagen 6-related myopathy [RCV000778644]|not provided [RCV000591047] | Chr21:46132103 [GRCh38] Chr21:47552017 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.811G>A (p.Gly271Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV000018695]|Bethlem myopathy 1B [RCV003764593]|not provided [RCV001781280] | Chr21:46115881 [GRCh38] Chr21:47535795 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1151dup (p.Glu386fs) | duplication | Ullrich congenital muscular dystrophy 1B [RCV003764594] | Chr21:46118643..46118644 [GRCh38] Chr21:47538557..47538558 [GRCh37] Chr21:21q22.3 |
pathogenic |
COL6A2, IVS17AS, A-G, -2 | single nucleotide variant | Ullrich congenital muscular dystrophy 1 [RCV000018697] | Chr21:21q22.3 | pathogenic |
NM_001849.4(COL6A2):c.1771-1G>A | single nucleotide variant | Ullrich congenital muscular dystrophy 1B [RCV003764595] | Chr21:46125265 [GRCh38] Chr21:47545179 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1861G>A (p.Asp621Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000018699]|Bethlem myopathy 1B [RCV004574029]|not provided [RCV000725485] | Chr21:46125509 [GRCh38] Chr21:47545423 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.1488_1513del (p.Arg498fs) | deletion | Ullrich congenital muscular dystrophy 1B [RCV003764596] | Chr21:46121584..46121609 [GRCh38] Chr21:47541498..47541523 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1117-10A>G | single nucleotide variant | Ullrich congenital muscular dystrophy 1B [RCV003764597] | Chr21:46118604 [GRCh38] Chr21:47538518 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.801+631_882del | deletion | Ullrich congenital muscular dystrophy 1B [RCV003764598] | Chr21:46114704..46116035 [GRCh38] Chr21:47534618..47535949 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1000-2A>G | single nucleotide variant | Bethlem myopathy 1A [RCV000018703]|Bethlem myopathy 1B [RCV003764599] | Chr21:46117398 [GRCh38] Chr21:47537312 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.2795C>T (p.Pro932Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV000018704]|Bethlem myopathy 1A [RCV000993564]|Bethlem myopathy 1B [RCV003764600]|COL6A2-related disorder [RCV004532388]|Collagen 6-related myopathy [RCV000359356]|Myosclerosis [RCV000302217]|not provided [RCV000859498]|not specified [RCV000149938] | Chr21:46132287 [GRCh38] Chr21:47552201 [GRCh37] Chr21:21q22.3 |
pathogenic|benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2455C>T (p.Gln819Ter) | single nucleotide variant | BETHLEM MYOPATHY 1B, AUTOSOMAL RECESSIVE [RCV003764601]|Bethlem myopathy 1A [RCV001327989]|Myosclerosis [RCV000018705]|not provided [RCV000480797] | Chr21:46126535 [GRCh38] Chr21:47546449 [GRCh37] Chr21:21q22.3 |
pathogenic|not provided |
NM_001849.4(COL6A2):c.2329T>C (p.Cys777Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000529271]|Ullrich congenital muscular dystrophy 1B [RCV003764602]|not provided [RCV001091900] | Chr21:46126144 [GRCh38] Chr21:47546058 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.847G>A (p.Gly283Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000816890]|Ullrich congenital muscular dystrophy 1B [RCV003764603]|not provided [RCV000269898] | Chr21:46115917 [GRCh38] Chr21:47535831 [GRCh37] Chr21:21q22.3 |
pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.1493G>A (p.Arg498His) | single nucleotide variant | Bethlem myopathy 1A [RCV000653500]|Collagen 6-related myopathy [RCV001138980]|Myosclerosis [RCV001138981]|Ullrich congenital muscular dystrophy 1B [RCV003764604]|not provided [RCV000710888] | Chr21:46121590 [GRCh38] Chr21:47541504 [GRCh37] Chr21:21q22.3 |
pathogenic|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2008A>G (p.Thr670Ala) | single nucleotide variant | Bethlem myopathy 1A [RCV001217548]|Muscle weakness [RCV000735341]|not provided [RCV003144579] | Chr21:46125823 [GRCh38] Chr21:47545737 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.123C>T (p.Thr41=) | single nucleotide variant | Bethlem myopathy 1A [RCV001500123]|not provided [RCV000729693] | Chr21:46111986 [GRCh38] Chr21:47531900 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1606G>A (p.Glu536Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV001085505]|Collagen 6-related myopathy [RCV001141593]|not provided [RCV000594262] | Chr21:46122529 [GRCh38] Chr21:47542443 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1518C>T (p.Pro506=) | single nucleotide variant | Bethlem myopathy 1A [RCV000551069] | Chr21:46121615 [GRCh38] Chr21:47541529 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.115+2T>C | single nucleotide variant | Bethlem myopathy 1A [RCV000554332]|Collagen 6-related myopathy [RCV000779359]|not provided [RCV003318594] | Chr21:46111593 [GRCh38] Chr21:47531507 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.487G>A (p.Gly163Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV000558910] | Chr21:46112350 [GRCh38] Chr21:47532264 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2883G>A (p.Ala961=) | single nucleotide variant | Bethlem myopathy 1A [RCV001392673]|not provided [RCV000727582] | Chr21:46132375 [GRCh38] Chr21:47552289 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1970-7_1981dup | duplication | not specified [RCV000519015] | Chr21:46125775..46125776 [GRCh38] Chr21:47545689..47545690 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1671+9_1671+10inv | inversion | Bethlem myopathy 1A [RCV001416108] | Chr21:46122946..46122947 [GRCh38] Chr21:47542860..47542861 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.863C>T (p.Pro288Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV000559454] | Chr21:46116016 [GRCh38] Chr21:47535930 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1921G>A (p.Val641Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000560104] | Chr21:46125569 [GRCh38] Chr21:47545483 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.3024C>T (p.Pro1008=) | single nucleotide variant | Bethlem myopathy 1A [RCV001401856]|not provided [RCV000728002] | Chr21:46132516 [GRCh38] Chr21:47552430 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2293G>A (p.Glu765Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000800070]|not provided [RCV000729358] | Chr21:46126108 [GRCh38] Chr21:47546022 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.167G>A (p.Ser56Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000554954]|Ullrich congenital muscular dystrophy 1A [RCV004546523]|not provided [RCV000594605] | Chr21:46112030 [GRCh38] Chr21:47531944 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2905G>A (p.Val969Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000544314]|not provided [RCV004722919] | Chr21:46132397 [GRCh38] Chr21:47552311 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2696C>T (p.Thr899Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001050083]|not provided [RCV000520439] | Chr21:46132188 [GRCh38] Chr21:47552102 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.344G>A (p.Arg115Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV001084615]|not provided [RCV000730361] | Chr21:46112207 [GRCh38] Chr21:47532121 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.624G>A (p.Pro208=) | single nucleotide variant | Bethlem myopathy 1A [RCV000557336]|COL6A2-related disorder [RCV004543242]|not provided [RCV001562433] | Chr21:46112487 [GRCh38] Chr21:47532401 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.827C>T (p.Pro276Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV000546141] | Chr21:46115897 [GRCh38] Chr21:47535811 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.3019C>G (p.Gln1007Glu) | single nucleotide variant | not provided [RCV000519278] | Chr21:46132511 [GRCh38] Chr21:47552425 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.803G>A (p.Gly268Asp) | single nucleotide variant | not provided [RCV000050246] | Chr21:46115873 [GRCh38] Chr21:47535787 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
GRCh38/hg38 21q22.3(chr21:42232926-46670405)x1 | copy number loss | See cases [RCV000050746] | Chr21:42232926..46670405 [GRCh38] Chr21:43653036..48090317 [GRCh37] Chr21:42526105..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 | copy number gain | See cases [RCV000050445] | Chr21:7749532..46670405 [GRCh38] Chr21:15499847..48090317 [GRCh37] Chr21:14421718..46914745 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters |
GRCh38/hg38 21q22.3(chr21:41285201-46670405)x1 | copy number loss | See cases [RCV000051022] | Chr21:41285201..46670405 [GRCh38] Chr21:42657128..48090317 [GRCh37] Chr21:41578998..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21q22.12-22.3(chr21:35027972-46670405)x1 | copy number loss | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052836]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052836]|See cases [RCV000052836] | Chr21:35027972..46670405 [GRCh38] Chr21:36400269..48090317 [GRCh37] Chr21:35322139..46914745 [NCBI36] Chr21:21q22.12-22.3 |
pathogenic |
GRCh38/hg38 21q22.13-22.3(chr21:38273492-46670405)x1 | copy number loss | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052838]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052838]|See cases [RCV000052838] | Chr21:38273492..46670405 [GRCh38] Chr21:39645414..48090317 [GRCh37] Chr21:38567284..46914745 [NCBI36] Chr21:21q22.13-22.3 |
pathogenic |
GRCh38/hg38 21q22.2-22.3(chr21:40127825-46670546)x1 | copy number loss | See cases [RCV000052839] | Chr21:40127825..46670546 [GRCh38] Chr21:41499752..48090458 [GRCh37] Chr21:40421622..46914886 [NCBI36] Chr21:21q22.2-22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:45085281-46670546)x1 | copy number loss | See cases [RCV000052841] | Chr21:45085281..46670546 [GRCh38] Chr21:46505196..48090458 [GRCh37] Chr21:45329624..46914886 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:45110477-46648012)x1 | copy number loss | See cases [RCV000052842] | Chr21:45110477..46648012 [GRCh38] Chr21:46530392..48067924 [GRCh37] Chr21:45354820..46892352 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:45138321-46670405)x1 | copy number loss | See cases [RCV000052864] | Chr21:45138321..46670405 [GRCh38] Chr21:46558236..48090317 [GRCh37] Chr21:45382664..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:45801860-46670405)x1 | copy number loss | See cases [RCV000052866] | Chr21:45801860..46670405 [GRCh38] Chr21:47221774..48090317 [GRCh37] Chr21:46046202..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46623792)x3 | copy number gain | See cases [RCV000053042] | Chr21:7749532..46623792 [GRCh38] Chr21:14595524..48043704 [GRCh37] Chr21:13517395..46868132 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46623792)x3 | copy number gain | See cases [RCV000053043] | Chr21:7749532..46623792 [GRCh38] Chr21:14629063..48043704 [GRCh37] Chr21:13550934..46868132 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670546)x3 | copy number gain | See cases [RCV000053045] | Chr21:7749532..46670546 [GRCh38] Chr21:15499647..48090458 [GRCh37] Chr21:14421518..46914886 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46661140)x3 | copy number gain | See cases [RCV000053065] | Chr21:7749532..46661140 [GRCh38] Chr21:15499647..48081052 [GRCh37] Chr21:14421518..46905480 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46661140)x3 | copy number gain | See cases [RCV000053067] | Chr21:7749532..46661140 [GRCh38] Chr21:15499847..48081052 [GRCh37] Chr21:14421718..46905480 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 | copy number gain | See cases [RCV000053068] | Chr21:7749532..46670405 [GRCh38] Chr21:20655360..48090317 [GRCh37] Chr21:19577231..46914745 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 | copy number gain | See cases [RCV000053069] | Chr21:7749532..46670405 [GRCh38] Chr21:34423268..48090317 [GRCh37] Chr21:33345138..46914745 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46623792)x3 | copy number gain | See cases [RCV000053039] | Chr21:7749532..46623792 [GRCh38] Chr21:14524963..48043704 [GRCh37] Chr21:13446834..46868132 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:45471378-46670405)x3 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053073]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053073]|See cases [RCV000053073] | Chr21:45471378..46670405 [GRCh38] Chr21:46891292..48090317 [GRCh37] Chr21:45715720..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46653090)x3 | copy number gain | See cases [RCV000053040] | Chr21:7749532..46653090 [GRCh38] Chr21:14539679..48073002 [GRCh37] Chr21:13461550..46897430 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1116+22C>T | single nucleotide variant | not specified [RCV000079838] | Chr21:46117958 [GRCh38] Chr21:47537872 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1116+32G>A | single nucleotide variant | Bethlem myopathy 1A [RCV001664306]|Myosclerosis [RCV001664307]|Ullrich congenital muscular dystrophy 1A [RCV001664308]|not provided [RCV000838854]|not specified [RCV000079839] | Chr21:46117968 [GRCh38] Chr21:46117968..46117969 [GRCh38] Chr21:47537882 [GRCh37] Chr21:47537882..47537883 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.116-34G>A | single nucleotide variant | not provided [RCV004703221]|not specified [RCV000079840] | Chr21:46111945 [GRCh38] Chr21:47531859 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1161C>T (p.Ile387=) | single nucleotide variant | Bethlem myopathy 1A [RCV001082236]|Collagen 6-related myopathy [RCV000376556]|Myosclerosis [RCV000267913]|not provided [RCV000530351]|not specified [RCV000248854] | Chr21:46118658 [GRCh38] Chr21:47538572 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1196G>A (p.Ser399Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV001516828]|Collagen 6-related myopathy [RCV000323060]|Myosclerosis [RCV000382221]|Ullrich congenital muscular dystrophy 1A [RCV001664309]|not provided [RCV004713224]|not specified [RCV000079842] | Chr21:46119046 [GRCh38] Chr21:47538960 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1251C>T (p.Arg417=) | single nucleotide variant | Bethlem myopathy 1A [RCV000542813]|Bethlem myopathy 1A [RCV002498404]|COL6A2-related disorder [RCV004542760]|Collagen 6-related myopathy [RCV000287747]|Myosclerosis [RCV000328820]|not provided [RCV001531977]|not specified [RCV000079843] | Chr21:46119101 [GRCh38] Chr21:47539015 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1332+26A>G | single nucleotide variant | Bethlem myopathy 1A [RCV001664310]|Myosclerosis [RCV001664311]|Ullrich congenital muscular dystrophy 1A [RCV001664312]|not provided [RCV000838851]|not specified [RCV000079844] | Chr21:46119876 [GRCh38] Chr21:47539790 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1333-8T>C | single nucleotide variant | Bethlem myopathy 1A [RCV001521301]|Collagen 6-related myopathy [RCV000335681]|Myosclerosis [RCV000294497]|not provided [RCV004713225]|not specified [RCV000079845] | Chr21:46120507 [GRCh38] Chr21:47540421 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1461del (p.Ser488fs) | deletion | Bethlem myopathy 1A [RCV001231224]|Ullrich congenital muscular dystrophy 1A [RCV002515767]|not provided [RCV000599098] | Chr21:46121558 [GRCh38] Chr21:47541472 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.1521+21A>G | single nucleotide variant | not provided [RCV000839972]|not specified [RCV000079847] | Chr21:46121639 [GRCh38] Chr21:47541553 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1522-1G>A | single nucleotide variant | not provided [RCV000175422] | Chr21:46122107 [GRCh38] Chr21:47542021 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1522-36T>C | single nucleotide variant | not provided [RCV000839980]|not specified [RCV000079849] | Chr21:46122072 [GRCh38] Chr21:47541986 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1552C>T (p.Pro518Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV001082248]|Collagen 6-related myopathy [RCV000366671]|Myosclerosis [RCV000271630]|not provided [RCV000710889]|not specified [RCV000079850] | Chr21:46122138 [GRCh38] Chr21:47542052 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.1573-32C>T | single nucleotide variant | not provided [RCV000839982]|not specified [RCV000079851] | Chr21:46122464 [GRCh38] Chr21:47542378 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1609-10C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001521302]|Collagen 6-related myopathy [RCV000373658]|Myosclerosis [RCV000278965]|not provided [RCV004713226]|not specified [RCV000079852] | Chr21:46122865 [GRCh38] Chr21:47542779 [GRCh37] Chr21:21q22.3 |
benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.1671+10A>G | single nucleotide variant | Bethlem myopathy 1A [RCV001516829]|Collagen 6-related myopathy [RCV000339110]|Myosclerosis [RCV000284926]|Ullrich congenital muscular dystrophy 1A [RCV001664313]|not provided [RCV004713227]|not specified [RCV000079853] | Chr21:46122947 [GRCh38] Chr21:47542861 [GRCh37] Chr21:21q22.3 |
benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.1671+9C>T | single nucleotide variant | Bethlem myopathy 1A [RCV000894495]|COL6A2-related disorder [RCV004542761]|not specified [RCV000079854] | Chr21:46122946 [GRCh38] Chr21:47542860 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1672-24C>G | single nucleotide variant | Bethlem myopathy 1A [RCV001664314]|Myosclerosis [RCV001664315]|Ullrich congenital muscular dystrophy 1A [RCV001664316]|not provided [RCV000838868]|not specified [RCV000079855] | Chr21:46124627 [GRCh38] Chr21:47544541 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1672-37G>T | single nucleotide variant | not provided [RCV000839988]|not specified [RCV000079856] | Chr21:46124614 [GRCh38] Chr21:47544528 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1734+35A>G | single nucleotide variant | not provided [RCV000839990]|not specified [RCV000079857] | Chr21:46124748 [GRCh38] Chr21:47544662 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1735-30A>G | single nucleotide variant | not provided [RCV000838857]|not specified [RCV000079858] | Chr21:46124855 [GRCh38] Chr21:47544769 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1769C>T (p.Thr590Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001086666]|COL6A2-related disorder [RCV004537332]|Collagen 6-related myopathy [RCV000370549]|Myosclerosis [RCV000276065]|not provided [RCV000658928]|not specified [RCV000079859] | Chr21:46124919 [GRCh38] Chr21:47544833 [GRCh37] Chr21:21q22.3 |
likely pathogenic|benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1770+4G>A | single nucleotide variant | Bethlem myopathy 1A [RCV001521670]|Collagen 6-related myopathy [RCV000317183]|Myosclerosis [RCV000371874]|not provided [RCV000710890]|not specified [RCV000079860] | Chr21:46124924 [GRCh38] Chr21:47544838 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1771-25A>G | single nucleotide variant | Bethlem myopathy 1A [RCV001664317]|Myosclerosis [RCV001664318]|Ullrich congenital muscular dystrophy 1A [RCV001664319]|not provided [RCV000838859]|not specified [RCV000079861] | Chr21:46125241 [GRCh38] Chr21:47545155 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1816+18del | deletion | Bethlem myopathy 1A [RCV002055144]|not provided [RCV000838559]|not specified [RCV000079862] | Chr21:46125328 [GRCh38] Chr21:47545242 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1817-33C>T | single nucleotide variant | not provided [RCV000841589]|not specified [RCV000079863] | Chr21:46125432 [GRCh38] Chr21:47545346 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1817-3dup | duplication | Bethlem myopathy 1A [RCV000990367]|Collagen 6-related myopathy [RCV000318558]|Myosclerosis [RCV000263416]|not provided [RCV000839263]|not specified [RCV000079864] | Chr21:46125455..46125456 [GRCh38] Chr21:47545369..47545370 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.1970-23G>C | single nucleotide variant | not provided [RCV000841590]|not specified [RCV000079865] | Chr21:46125762 [GRCh38] Chr21:47545676 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1970-3C>A | single nucleotide variant | Bethlem myopathy 1A [RCV000709829]|Bethlem myopathy 1A [RCV001084118]|Collagen 6-related myopathy [RCV000300588]|Myosclerosis [RCV000259240]|Tip-toe gait [RCV003319318]|not provided [RCV000415855] | Chr21:46125782 [GRCh38] Chr21:47545696 [GRCh37] Chr21:21q22.3 |
likely pathogenic|likely benign|conflicting interpretations of pathogenicity|uncertain significance|not provided |
NM_001849.4(COL6A2):c.1998C>G (p.Ser666Arg) | single nucleotide variant | not provided [RCV000079867] | Chr21:46125813 [GRCh38] Chr21:47545727 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2039G>A (p.Arg680His) | single nucleotide variant | Bethlem myopathy 1A [RCV000990369]|Collagen 6-related myopathy [RCV000380396]|Myosclerosis [RCV000320471]|Ullrich congenital muscular dystrophy 1A [RCV001664320]|not provided [RCV000710891]|not specified [RCV000079868] | Chr21:46125854 [GRCh38] Chr21:46125854..46125855 [GRCh38] Chr21:47545768 [GRCh37] Chr21:47545768..47545769 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2094G>A (p.Ala698=) | single nucleotide variant | Bethlem myopathy 1A [RCV001520876]|Collagen 6-related myopathy [RCV000267217]|Myosclerosis [RCV000327020]|Ullrich congenital muscular dystrophy 1A [RCV001664321]|not provided [RCV000710892]|not specified [RCV000079869] | Chr21:46125909 [GRCh38] Chr21:46125909..46125910 [GRCh38] Chr21:47545823 [GRCh37] Chr21:47545823..47545824 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2097C>T (p.Gly699=) | single nucleotide variant | Bethlem myopathy 1A [RCV001520877]|Collagen 6-related myopathy [RCV000291715]|Myosclerosis [RCV000381689]|Ullrich congenital muscular dystrophy 1A [RCV001664322]|not provided [RCV000710893]|not specified [RCV000079870] | Chr21:46125912 [GRCh38] Chr21:47545826 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2113T>C (p.Ser705Pro) | single nucleotide variant | not provided [RCV000079871] | Chr21:46125928 [GRCh38] Chr21:47545842 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2136C>T (p.Asp712=) | single nucleotide variant | Bethlem myopathy 1A [RCV000550681]|Collagen 6-related myopathy [RCV001143524]|not provided [RCV001719828]|not specified [RCV000079872] | Chr21:46125951 [GRCh38] Chr21:47545865 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2160C>G (p.Arg720=) | single nucleotide variant | Bethlem myopathy 1A [RCV001085011]|Bethlem myopathy 1A [RCV002490696]|Collagen 6-related myopathy [RCV000292788]|Myosclerosis [RCV000352815]|not provided [RCV000710894]|not specified [RCV000079873] | Chr21:46125975 [GRCh38] Chr21:47545889 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.2163G>A (p.Gln721=) | single nucleotide variant | Bethlem myopathy 1A [RCV001080043]|Collagen 6-related myopathy [RCV000299188]|Myosclerosis [RCV000400892]|not provided [RCV000710895]|not specified [RCV000079874] | Chr21:46125978 [GRCh38] Chr21:47545892 [GRCh37] Chr21:21q22.3 |
benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.2184G>A (p.Val728=) | single nucleotide variant | Bethlem myopathy 1A [RCV001520878]|Collagen 6-related myopathy [RCV000304018]|Myosclerosis [RCV000264972]|Ullrich congenital muscular dystrophy 1A [RCV001664323]|not provided [RCV000710896]|not specified [RCV000079875] | Chr21:46125999 [GRCh38] Chr21:47545913 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2241G>A (p.Leu747=) | single nucleotide variant | not provided [RCV000723639]|not specified [RCV000079876] | Chr21:46126056 [GRCh38] Chr21:47545970 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2351G>A (p.Arg784His) | single nucleotide variant | Bethlem myopathy 1A [RCV000990371]|Collagen 6-related myopathy [RCV000281111]|not provided [RCV000420180]|not specified [RCV000079877] | Chr21:46126166 [GRCh38] Chr21:47546080 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2423-35C>A | single nucleotide variant | not provided [RCV000839994]|not specified [RCV000079878] | Chr21:46126468 [GRCh38] Chr21:47546382 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2462-35C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001664324]|Myosclerosis [RCV001664325]|Ullrich congenital muscular dystrophy 1A [RCV001664326]|not provided [RCV000838866]|not specified [RCV000079879] | Chr21:46131919 [GRCh38] Chr21:47551833 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2484G>A (p.Thr828=) | single nucleotide variant | Bethlem myopathy 1A [RCV001086738]|not provided [RCV000079880] | Chr21:46131976 [GRCh38] Chr21:47551890 [GRCh37] Chr21:21q22.3 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2580G>A (p.Ala860=) | single nucleotide variant | Bethlem myopathy 1A [RCV001084761]|COL6A2-related disorder [RCV004734637]|not provided [RCV000079881] | Chr21:46132072 [GRCh38] Chr21:47551986 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2610C>T (p.Asp870=) | single nucleotide variant | Bethlem myopathy 1A [RCV000533399]|COL6A2-related disorder [RCV004537333]|not provided [RCV001719829]|not specified [RCV000079882] | Chr21:46132102 [GRCh38] Chr21:47552016 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2697G>T (p.Thr899=) | single nucleotide variant | Bethlem myopathy 1A [RCV001521916]|Collagen 6-related myopathy [RCV000380522]|Glutamate formiminotransferase deficiency [RCV000388741]|Myosclerosis [RCV000323613]|not provided [RCV001711231]|not specified [RCV000079883] | Chr21:46132189 [GRCh38] Chr21:47552103 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2724A>G (p.Thr908=) | single nucleotide variant | Bethlem myopathy 1A [RCV001521303]|Collagen 6-related myopathy [RCV000386615]|Glutamate formiminotransferase deficiency [RCV000289634]|Myosclerosis [RCV000348436]|not provided [RCV000710897]|not specified [RCV000079884] | Chr21:46132216 [GRCh38] Chr21:47552130 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2761G>A (p.Val921Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000796644]|Inborn genetic diseases [RCV002514404]|not provided [RCV000079885] | Chr21:46132253 [GRCh38] Chr21:47552167 [GRCh37] Chr21:21q22.3 |
likely benign|drug response|uncertain significance |
NM_001849.4(COL6A2):c.2769C>T (p.His923=) | single nucleotide variant | Bethlem myopathy 1A [RCV001084163]|Collagen 6-related myopathy [RCV000298848]|Myosclerosis [RCV000402270]|not provided [RCV000585142]|not specified [RCV000079886] | Chr21:46132261 [GRCh38] Chr21:47552175 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2803G>A (p.Gly935Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV001519261]|Collagen 6-related myopathy [RCV000305730]|Glutamate formiminotransferase deficiency [RCV000344640]|Myosclerosis [RCV000267009]|not provided [RCV000710898]|not specified [RCV000079887] | Chr21:46132295 [GRCh38] Chr21:46132295..46132296 [GRCh38] Chr21:47552209 [GRCh37] Chr21:47552209..47552210 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2886C>T (p.His962=) | single nucleotide variant | Bethlem myopathy 1A [RCV000531963]|Collagen 6-related myopathy [RCV001141919]|not specified [RCV000079888] | Chr21:46132378 [GRCh38] Chr21:47552292 [GRCh37] Chr21:21q22.3 |
benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2979C>T (p.Arg993=) | single nucleotide variant | Bethlem myopathy 1A [RCV001521304]|Collagen 6-related myopathy [RCV000373863]|Glutamate formiminotransferase deficiency [RCV000404594]|Myosclerosis [RCV000335530]|not provided [RCV004703222]|not specified [RCV000079889] | Chr21:46132471 [GRCh38] Chr21:47552385 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2983G>A (p.Ala995Thr) | single nucleotide variant | Bethlem myopathy 1A [RCV001086855]|Collagen 6-related myopathy [RCV000285298]|Myosclerosis [RCV000398635]|not provided [RCV000514272]|not specified [RCV000079890] | Chr21:46132475 [GRCh38] Chr21:47552389 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.3043A>C (p.Ile1015Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV001082806]|Collagen 6-related myopathy [RCV000333824]|Glutamate formiminotransferase deficiency [RCV000341066]|Myosclerosis [RCV000353550]|not provided [RCV000224012]|not specified [RCV000079891] | Chr21:46132535 [GRCh38] Chr21:47552449 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.316G>A (p.Glu106Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000990365]|Bethlem myopathy 1A [RCV002483139]|Collagen 6-related myopathy [RCV000354637]|not provided [RCV000224165]|not specified [RCV000079892] | Chr21:46112179 [GRCh38] Chr21:47532093 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.499G>A (p.Gly167Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV000542888]|COL6A2-related disorder [RCV004537334]|Collagen 6-related myopathy [RCV000326258]|Myosclerosis [RCV000269020]|not provided [RCV004703223]|not specified [RCV000079893] | Chr21:46112362 [GRCh38] Chr21:47532276 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.663C>T (p.Pro221=) | single nucleotide variant | Bethlem myopathy 1A [RCV001510600]|Collagen 6-related myopathy [RCV000314347]|Myosclerosis [RCV000371278]|not provided [RCV000710900]|not specified [RCV000079894] | Chr21:46112526 [GRCh38] Chr21:47532440 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.679G>A (p.Asp227Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000550109]|Collagen 6-related myopathy [RCV000274404]|Myosclerosis [RCV000331731]|not provided [RCV000710901]|not specified [RCV000079895] | Chr21:46112542 [GRCh38] Chr21:47532456 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.714+29G>A | single nucleotide variant | not provided [RCV001650910]|not specified [RCV000079896] | Chr21:46112606 [GRCh38] Chr21:47532520 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.714+45C>T | single nucleotide variant | not provided [RCV000841558]|not specified [RCV000079897] | Chr21:46112622 [GRCh38] Chr21:47532536 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.714+9C>T | single nucleotide variant | Bethlem myopathy 1A [RCV000538531]|Collagen 6-related myopathy [RCV000374715]|Myosclerosis [RCV000263753]|not provided [RCV000710902]|not specified [RCV000079898] | Chr21:46112586 [GRCh38] Chr21:47532500 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.759A>G (p.Glu253=) | single nucleotide variant | Bethlem myopathy 1A [RCV001083627]|COL6A2-related disorder [RCV004537335]|Collagen 6-related myopathy [RCV000378558]|Myosclerosis [RCV000316583]|Tip-toe gait [RCV002226455]|not provided [RCV000723766] | Chr21:46114031 [GRCh38] Chr21:47533945 [GRCh37] Chr21:21q22.3 |
likely pathogenic|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.832G>A (p.Glu278Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV001084362]|Collagen 6-related myopathy [RCV000377472]|Myosclerosis [RCV000290059]|not provided [RCV000514873]|not specified [RCV000079900] | Chr21:46115902 [GRCh38] Chr21:47535816 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.855+2T>G | single nucleotide variant | not provided [RCV000179392] | Chr21:46115927 [GRCh38] Chr21:47535841 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.928-19C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001664327]|Myosclerosis [RCV001664328]|Ullrich congenital muscular dystrophy 1A [RCV001664329]|not provided [RCV004713228]|not specified [RCV000079902] | Chr21:46116632 [GRCh38] Chr21:47536546 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.955-8C>T | single nucleotide variant | not provided [RCV000079903] | Chr21:46116762 [GRCh38] Chr21:47536676 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2592G>A (p.Thr864=) | single nucleotide variant | Bethlem myopathy 1A [RCV000554539]|Collagen 6-related myopathy [RCV000347826]|Glutamate formiminotransferase deficiency [RCV000352852]|Myosclerosis [RCV000290550]|not provided [RCV004703381]|not specified [RCV000116793] | Chr21:46132084 [GRCh38] Chr21:47551998 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|conflicting data from submitters |
NM_001849.4(COL6A2):c.2980G>A (p.Ala994Thr) | single nucleotide variant | Bethlem myopathy 1A [RCV000557640]|Bethlem myopathy 1A [RCV002498506]|Collagen 6-related myopathy [RCV000281717]|Glutamate formiminotransferase deficiency [RCV000290682]|Myosclerosis [RCV000339033]|not provided [RCV004703382]|not specified [RCV000116794] | Chr21:46132472 [GRCh38] Chr21:47552386 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.1997G>A (p.Ser666Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV001337641]|not provided [RCV000171510] | Chr21:46125812 [GRCh38] Chr21:47545726 [GRCh37] Chr21:21q22.3 |
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1752T>C (p.Pro584=) | single nucleotide variant | Bethlem myopathy 1A [RCV001394511] | Chr21:46124902 [GRCh38] Chr21:47544816 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2332G>A (p.Asp778Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000546308]|COL6A2-related disorder [RCV004539640]|Collagen 6-related myopathy [RCV000317134]|Myosclerosis [RCV000371801]|not provided [RCV001697205]|not specified [RCV000176646] | Chr21:46126147 [GRCh38] Chr21:47546061 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.510C>T (p.Cys170=) | single nucleotide variant | Bethlem myopathy 1A [RCV000560821]|Bethlem myopathy 1A [RCV002485154]|Collagen 6-related myopathy [RCV000387780]|Inborn genetic diseases [RCV003243000]|Myosclerosis [RCV000295895]|not provided [RCV001531976]|not specified [RCV000177136] | Chr21:46112373 [GRCh38] Chr21:47532287 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.483C>T (p.Thr161=) | single nucleotide variant | Bethlem myopathy 1A [RCV000546366]|Collagen 6-related myopathy [RCV000265513]|Myosclerosis [RCV000357943]|not provided [RCV001721114]|not specified [RCV000177137] | Chr21:46112346 [GRCh38] Chr21:47532260 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2871G>A (p.Leu957=) | single nucleotide variant | Bethlem myopathy 1A [RCV000556046]|not provided [RCV001704840]|not specified [RCV000176860] | Chr21:46132363 [GRCh38] Chr21:47552277 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2462-5dup | duplication | Bethlem myopathy 1A [RCV000549190]|Collagen 6-related myopathy [RCV000398480]|Myosclerosis [RCV000306686]|not specified [RCV000176862] | Chr21:46131945..46131946 [GRCh38] Chr21:47551859..47551860 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2944A>G (p.Met982Val) | single nucleotide variant | Bethlem myopathy 1A [RCV000549645]|COL6A2-related disorder [RCV004539643]|Collagen 6-related myopathy [RCV000275063]|Myosclerosis [RCV000332444]|not provided [RCV001675656]|not specified [RCV000176864] | Chr21:46132436 [GRCh38] Chr21:47552350 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.801+1G>A | single nucleotide variant | Abnormality of the musculature [RCV001814091]|Bethlem myopathy 1A [RCV000178851]|not provided [RCV000178850] | Chr21:46114074 [GRCh38] Chr21:47533988 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.812G>A (p.Gly271Asp) | single nucleotide variant | not provided [RCV000179391] | Chr21:46115882 [GRCh38] Chr21:47535796 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.875G>T (p.Gly292Val) | single nucleotide variant | Bethlem myopathy 1A [RCV000179832]|not provided [RCV000179831] | Chr21:46116028 [GRCh38] Chr21:47535942 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.124G>T (p.Asp42Tyr) | single nucleotide variant | Bethlem myopathy 1A [RCV003104332]|not provided [RCV004763590] | Chr21:46111987 [GRCh38] Chr21:47531901 [GRCh37] Chr21:21q22.3 |
uncertain significance |
GRCh37/hg19 21q22.3(chr21:47486134-47796810)x3 | copy number gain | See cases [RCV000184073] | Chr21:47486134..47796810 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1070C>G (p.Pro357Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV001086194]|COL6A2-related disorder [RCV004539608]|Collagen 6-related myopathy [RCV000353406]|Myosclerosis [RCV000300853]|not provided [RCV000762045]|not specified [RCV000174304] | Chr21:46117890 [GRCh38] Chr21:47537804 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1063G>T (p.Gly355Cys) | single nucleotide variant | not provided [RCV000392800] | Chr21:46117883 [GRCh38] Chr21:47537797 [GRCh37] Chr21:21q22.3 |
likely pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.988G>A (p.Asp330Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000536085]|Collagen 6-related myopathy [RCV000311316]|Myosclerosis [RCV000407691]|Tip-toe gait [RCV004725025]|not provided [RCV000724011] | Chr21:46116803 [GRCh38] Chr21:47536717 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
GRCh38/hg38 21q22.3(chr21:43071168-46670405)x1 | copy number loss | See cases [RCV000133675] | Chr21:43071168..46670405 [GRCh38] Chr21:44491278..48090317 [GRCh37] Chr21:43364347..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46653084)x3 | copy number gain | See cases [RCV000134727] | Chr21:7749532..46653084 [GRCh38] Chr21:15485038..48072996 [GRCh37] Chr21:14406909..46897424 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46649831)x3 | copy number gain | See cases [RCV000134509] | Chr21:7749532..46649831 [GRCh38] Chr21:14577835..48069743 [GRCh37] Chr21:13499706..46894171 [NCBI36] Chr21:21q11.2-22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670440)x3 | copy number gain | See cases [RCV000134119] | Chr21:7749532..46670440 [GRCh38] Chr21:15485038..48090352 [GRCh37] Chr21:14406909..46914780 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q22.11-22.3(chr21:7749532-46670346)x3 | copy number gain | See cases [RCV000135310] | Chr21:7749532..46670346 [GRCh38] Chr21:34111831..48090258 [GRCh37] Chr21:33033702..46914686 [NCBI36] Chr21:21q22.11-22.3 |
pathogenic |
GRCh38/hg38 21q22.12-22.3(chr21:36206067-46670405)x3 | copy number gain | See cases [RCV000134972] | Chr21:36206067..46670405 [GRCh38] Chr21:37578365..48090317 [GRCh37] Chr21:36500235..46914745 [NCBI36] Chr21:21q22.12-22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1336G>A (p.Asp446Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000544905]|Bethlem myopathy 1A [RCV003483560]|Collagen 6-related myopathy [RCV000391113]|Inborn genetic diseases [RCV001267221]|Myosclerosis [RCV000300525]|not provided [RCV000766827]|not specified [RCV000232259] | Chr21:46120518 [GRCh38] Chr21:47540432 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance|not provided |
NM_001849.4(COL6A2):c.1333-10C>G | single nucleotide variant | Bethlem myopathy 1A [RCV001081936]|COL6A2-related disorder [RCV004539622]|Collagen 6-related myopathy [RCV000400775]|Myosclerosis [RCV000348429]|not provided [RCV000724812] | Chr21:46120505 [GRCh38] Chr21:47540419 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46664250)x3 | copy number gain | See cases [RCV000134836] | Chr21:7749532..46664250 [GRCh38] Chr21:15485038..48084162 [GRCh37] Chr21:14406909..46908590 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670440)x3 | copy number gain | See cases [RCV000134842] | Chr21:7749532..46670440 [GRCh38] Chr21:15513244..48090352 [GRCh37] Chr21:14435115..46914780 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46660999)x3 | copy number gain | See cases [RCV000135448] | Chr21:7749532..46660999 [GRCh38] Chr21:15499847..48080911 [GRCh37] Chr21:14421718..46905339 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q22.13-22.3(chr21:36519173-46670405)x3 | copy number gain | See cases [RCV000136142] | Chr21:36519173..46670405 [GRCh38] Chr21:37891471..48090317 [GRCh37] Chr21:36813341..46914745 [NCBI36] Chr21:21q22.13-22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1437T>C (p.Ala479=) | single nucleotide variant | Bethlem myopathy 1A [RCV001087783]|Collagen 6-related myopathy [RCV000355395]|Myosclerosis [RCV000391111]|not provided [RCV000724248]|not specified [RCV000249787] | Chr21:46121102 [GRCh38] Chr21:47541016 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1458+3C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001069904]|not provided [RCV000175165]|not specified [RCV004586592] | Chr21:46121126 [GRCh38] Chr21:47541040 [GRCh37] Chr21:21q22.3 |
uncertain significance |
GRCh38/hg38 21q22.12-22.3(chr21:34789953-46636538)x1 | copy number loss | See cases [RCV000136828] | Chr21:34789953..46636538 [GRCh38] Chr21:36162250..48056450 [GRCh37] Chr21:35084120..46880878 [NCBI36] Chr21:21q22.12-22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 | copy number gain | See cases [RCV000137255] | Chr21:7749532..46671060 [GRCh38] Chr21:35319225..48090972 [GRCh37] Chr21:34241095..46915400 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 | copy number gain | See cases [RCV000137337] | Chr21:7749532..46671060 [GRCh38] Chr21:10697897..48090972 [GRCh37] Chr21:1..46915400 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:41733640-46671060)x1 | copy number loss | See cases [RCV000137341] | Chr21:41733640..46671060 [GRCh38] Chr21:43153800..48090972 [GRCh37] Chr21:42026869..46915400 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 | copy number gain | See cases [RCV000138216] | Chr21:7749532..46671060 [GRCh38] Chr21:10944001..48090972 [GRCh37] Chr21:9965872..46915400 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q22.13-22.3(chr21:37669628-46671060)x1 | copy number loss | See cases [RCV000138096] | Chr21:37669628..46671060 [GRCh38] Chr21:39041930..48090972 [GRCh37] Chr21:37963800..46915400 [NCBI36] Chr21:21q22.13-22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1521+5G>A | single nucleotide variant | Bethlem myopathy 1A [RCV001339362]|not provided [RCV000175291] | Chr21:46121623 [GRCh38] Chr21:47541537 [GRCh37] Chr21:21q22.3 |
uncertain significance |
GRCh38/hg38 21q22.12-22.3(chr21:36066991-46671060)x3 | copy number gain | See cases [RCV000138164] | Chr21:36066991..46671060 [GRCh38] Chr21:37439289..48090972 [GRCh37] Chr21:36361159..46915400 [NCBI36] Chr21:21q22.12-22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:45877354-46543273)x3 | copy number gain | See cases [RCV000137820] | Chr21:45877354..46543273 [GRCh38] Chr21:47297268..47963186 [GRCh37] Chr21:46121696..46787614 [NCBI36] Chr21:21q22.3 |
likely benign |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46671060)x3 | copy number gain | See cases [RCV000138436] | Chr21:7749532..46671060 [GRCh38] Chr21:15451032..48090972 [GRCh37] Chr21:14372903..46915400 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic|conflicting data from submitters |
GRCh38/hg38 21q22.2-22.3(chr21:40296025-46670440)x1 | copy number loss | See cases [RCV000139158] | Chr21:40296025..46670440 [GRCh38] Chr21:41667952..48090352 [GRCh37] Chr21:40589822..46914780 [NCBI36] Chr21:21q22.2-22.3 |
pathogenic |
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46670346)x3 | copy number gain | See cases [RCV000140103] | Chr21:7749532..46670346 [GRCh38] Chr21:14577894..48090258 [GRCh37] Chr21:13499765..46914686 [NCBI36] Chr21:21q11.2-22.3 |
pathogenic |
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46698247)x3 | copy number gain | See cases [RCV000141346] | Chr21:7749532..46698247 [GRCh38] Chr21:14577835..48118159 [GRCh37] Chr21:13499706..46942587 [NCBI36] Chr21:21q11.2-22.3 |
pathogenic |
GRCh38/hg38 21q21.3-22.3(chr21:7749532-46677460)x3 | copy number gain | See cases [RCV000141827] | Chr21:7749532..46677460 [GRCh38] Chr21:28285299..48097372 [GRCh37] Chr21:27207170..46921800 [NCBI36] Chr21:21q21.3-22.3 |
uncertain significance |
GRCh38/hg38 21q22.3(chr21:45903036-46677460)x1 | copy number loss | See cases [RCV000141901] | Chr21:45903036..46677460 [GRCh38] Chr21:47322950..48097372 [GRCh37] Chr21:46147378..46921800 [NCBI36] Chr21:21q22.3 |
uncertain significance |
GRCh38/hg38 21q22.2-22.3(chr21:38816399-46677460)x1 | copy number loss | See cases [RCV000142311] | Chr21:38816399..46677460 [GRCh38] Chr21:40188323..48097372 [GRCh37] Chr21:39110193..46921800 [NCBI36] Chr21:21q22.2-22.3 |
pathogenic |
GRCh38/hg38 21p11.2-q22.3(chr21:7817158-46670440)x1 | copy number loss | See cases [RCV000142427] | Chr21:7817158..46670440 [GRCh38] Chr21:15485038..48090352 [GRCh37] Chr21:14406909..46914780 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46677460)x3 | copy number gain | See cases [RCV000143120] | Chr21:7749532..46677460 [GRCh38] Chr21:15006457..48097372 [GRCh37] Chr21:13928328..46921800 [NCBI36] Chr21:21q11.2-22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:42913213-46670405)x1 | copy number loss | See cases [RCV000142600] | Chr21:42913213..46670405 [GRCh38] Chr21:44333323..48090317 [GRCh37] Chr21:43206392..46914745 [NCBI36] Chr21:21q22.3 |
pathogenic |
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46677460)x3 | copy number gain | See cases [RCV000143376] | Chr21:7749532..46677460 [GRCh38] Chr21:15006458..48097372 [GRCh37] Chr21:13928329..46921800 [NCBI36] Chr21:21q11.2-22.3 |
pathogenic |
GRCh38/hg38 21q11.2-22.3(chr21:7749532-46677460) | copy number gain | See cases [RCV000143160] | Chr21:7749532..46677460 [GRCh38] Chr21:14386013..48097372 [GRCh37] Chr21:13307884..46921800 [NCBI36] Chr21:21q11.2-22.3 |
pathogenic |
GRCh38/hg38 21q22.3(chr21:42129699-46671060)x1 | copy number loss | See cases [RCV000143335] | Chr21:42129699..46671060 [GRCh38] Chr21:43549809..48090972 [GRCh37] Chr21:42422878..46915400 [NCBI36] Chr21:21q22.3 |
pathogenic |
NM_001849.3(COL6A2):c.118A>G (p.Lys40Glu) | single nucleotide variant | Congenital muscular dystrophy [RCV000149924] | Chr21:46111981 [GRCh38] Chr21:47531895 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.148G>A (p.Val50Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000662156]|Ullrich congenital muscular dystrophy 1A [RCV000662155] | Chr21:46112011 [GRCh38] Chr21:47531925 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.857G>A (p.Gly286Glu) | single nucleotide variant | Bethlem myopathy 1A [RCV000810925]|not provided [RCV000593309] | Chr21:46116010 [GRCh38] Chr21:47535924 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.874G>A (p.Gly292Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV002047237] | Chr21:46116027 [GRCh38] Chr21:47535941 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1465C>T (p.Arg489Trp) | single nucleotide variant | Bethlem myopathy 1A [RCV002514869]|Collagen 6-related myopathy [RCV001138979]|Ullrich congenital muscular dystrophy 1A [RCV001330649]|not provided [RCV000735128] | Chr21:46121562 [GRCh38] Chr21:47541476 [GRCh37] Chr21:21q22.3 |
likely pathogenic|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1797G>C (p.Arg599Ser) | single nucleotide variant | not provided [RCV000348885] | Chr21:46125292 [GRCh38] Chr21:47545206 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.3(COL6A2):c.1975C>A (p.Arg659Ser) | single nucleotide variant | Congenital muscular dystrophy [RCV000149933] | Chr21:46125790 [GRCh38] Chr21:47545704 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2002G>A (p.Glu668Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000808953]|not provided [RCV000512668] | Chr21:46125817 [GRCh38] Chr21:47545731 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2558G>A (p.Arg853Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000990372]|Bethlem myopathy 1A [RCV002505139]|COL6A2-related disorder [RCV004532670]|Collagen 6-related myopathy [RCV000370345]|Myosclerosis [RCV000259316]|not provided [RCV000541944]|not specified [RCV000149936] | Chr21:46132050 [GRCh38] Chr21:47551964 [GRCh37] Chr21:21q22.3 |
likely pathogenic|benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2566G>A (p.Val856Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001053729]|Collagen 6-related myopathy [RCV000316783]|Inborn genetic diseases [RCV002514870]|Myosclerosis [RCV000373797]|not provided [RCV000149937] | Chr21:46132058 [GRCh38] Chr21:47551972 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.3(COL6A2):c.2924C>A (p.Ala975Asp) | single nucleotide variant | Congenital muscular dystrophy [RCV000149939] | Chr21:46132416 [GRCh38] Chr21:47552330 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.911G>T (p.Gly304Val) | single nucleotide variant | Bethlem myopathy 1A [RCV000559107] | Chr21:46116387 [GRCh38] Chr21:47536301 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.1531G>A (p.Gly511Ser) | single nucleotide variant | not provided [RCV000731026] | Chr21:46122117 [GRCh38] Chr21:47542031 [GRCh37] Chr21:21q22.3 |
likely pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.1975C>T (p.Arg659Cys) | single nucleotide variant | Bethlem myopathy 1A [RCV001926746]|COL6A2-related disorder [RCV004538631]|not provided [RCV003146368] | Chr21:46125790 [GRCh38] Chr21:47545704 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2402T>G (p.Met801Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV001325357]|not provided [RCV003144141] | Chr21:46126217 [GRCh38] Chr21:47546131 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2508C>A (p.Phe836Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV000525095] | Chr21:46132000 [GRCh38] Chr21:47551914 [GRCh37] Chr21:21q22.3 |
likely pathogenic|uncertain significance |
GRCh38/hg38 21p11.2-q22.3(chr21:7749532-46670405)x3 | copy number gain | See cases [RCV000148131] | Chr21:7749532..46670405 [GRCh38] Chr21:15499847..48090317 [GRCh37] Chr21:14421718..46914745 [NCBI36] Chr21:21p11.2-q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1162G>A (p.Gly388Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000808812]|Bethlem myopathy 1B [RCV004596075]|not provided [RCV000153082] | Chr21:46118659 [GRCh38] Chr21:47538573 [GRCh37] Chr21:21q22.3 |
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1336G>C (p.Asp446His) | single nucleotide variant | Bethlem myopathy 1A [RCV000557300]|not provided [RCV000153083] | Chr21:46120518 [GRCh38] Chr21:47540432 [GRCh37] Chr21:21q22.3 |
benign|uncertain significance |
NM_001849.4(COL6A2):c.1761C>T (p.Pro587=) | single nucleotide variant | Bethlem myopathy 1A [RCV001079810]|not provided [RCV000723870]|not specified [RCV000153084] | Chr21:46124911 [GRCh38] Chr21:47544825 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2220T>C (p.Asp740=) | single nucleotide variant | Bethlem myopathy 1A [RCV000552565]|Collagen 6-related myopathy [RCV000268659]|Myosclerosis [RCV000363329]|not provided [RCV001719949]|not specified [RCV000153085] | Chr21:46126035 [GRCh38] Chr21:47545949 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2528G>A (p.Arg843Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000704454]|not provided [RCV000153086]|not specified [RCV004700477] | Chr21:46132020 [GRCh38] Chr21:47551934 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2605G>A (p.Asp869Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000531465]|Collagen 6-related myopathy [RCV000399376]|Myosclerosis [RCV000312795]|not provided [RCV001704107]|not specified [RCV000153087] | Chr21:46132097 [GRCh38] Chr21:47552011 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.22G>A (p.Val8Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001084510]|not provided [RCV000724735] | Chr21:46111498 [GRCh38] Chr21:47531412 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2489G>A (p.Arg830Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV001208362]|Myopathy [RCV000193161]|not provided [RCV000387708] | Chr21:46131981 [GRCh38] Chr21:47551895 [GRCh37] Chr21:21q22.3 |
likely pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.2894G>C (p.Arg965Pro) | single nucleotide variant | Bethlem myopathy 1A [RCV000560338]|Ullrich congenital muscular dystrophy 1A [RCV002227464]|not provided [RCV000254951] | Chr21:46132386 [GRCh38] Chr21:47552300 [GRCh37] Chr21:21q22.3 |
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2040dup (p.Ile681fs) | duplication | Ullrich congenital muscular dystrophy 1A [RCV000256480] | Chr21:46125854..46125855 [GRCh38] Chr21:47545768..47545769 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.730G>A (p.Gly244Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000805017]|not provided [RCV000178169] | Chr21:46112819 [GRCh38] Chr21:47532733 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2633C>T (p.Ala878Val) | single nucleotide variant | Bethlem myopathy 1A [RCV000546019]|Myopathy [RCV000194202]|Ullrich congenital muscular dystrophy 1A [RCV002227456]|not provided [RCV000266193] | Chr21:46132125 [GRCh38] Chr21:47552039 [GRCh37] Chr21:21q22.3 |
likely pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.2517C>T (p.Asp839=) | single nucleotide variant | Bethlem myopathy 1A [RCV001087613]|COL6A2-related disorder [RCV004537414]|Collagen 6-related myopathy [RCV000310053]|Myosclerosis [RCV000367104]|not provided [RCV000723503] | Chr21:46132009 [GRCh38] Chr21:47551923 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2961G>A (p.Thr987=) | single nucleotide variant | Bethlem myopathy 1A [RCV001088613]|not provided [RCV000724103]|not specified [RCV000176857] | Chr21:46132453 [GRCh38] Chr21:47552367 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2796G>A (p.Pro932=) | single nucleotide variant | Bethlem myopathy 1A [RCV001087608]|not provided [RCV000827210]|not specified [RCV000176859] | Chr21:46132288 [GRCh38] Chr21:47552202 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2751G>T (p.Val917=) | single nucleotide variant | Bethlem myopathy 1A [RCV001086781]|Collagen 6-related myopathy [RCV000294726]|Myosclerosis [RCV000351968]|not provided [RCV000724665]|not specified [RCV000241740] | Chr21:46132243 [GRCh38] Chr21:47552157 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2683A>C (p.Ser895Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV001082268]|COL6A2-related disorder [RCV004539642]|Collagen 6-related myopathy [RCV001143620]|not provided [RCV000416019]|not specified [RCV000176863] | Chr21:46132175 [GRCh38] Chr21:47552089 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2679G>A (p.Pro893=) | single nucleotide variant | Bethlem myopathy 1A [RCV001460927]|not provided [RCV000176865] | Chr21:46132171 [GRCh38] Chr21:47552085 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2850C>T (p.Gly950=) | single nucleotide variant | Bethlem myopathy 1A [RCV001089400]|COL6A2-related disorder [RCV004537415]|not provided [RCV000176866] | Chr21:46132342 [GRCh38] Chr21:47552256 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2605G>T (p.Asp869Tyr) | single nucleotide variant | Bethlem myopathy 1A [RCV001078865]|Collagen 6-related myopathy [RCV000351153]|Myosclerosis [RCV000407370]|not provided [RCV000724824] | Chr21:46132097 [GRCh38] Chr21:47552011 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.933A>T (p.Glu311Asp) | single nucleotide variant | Bethlem myopathy 1A [RCV001212040]|Collagen 6-related myopathy [RCV001141472]|Inborn genetic diseases [RCV004020175]|not provided [RCV000180577] | Chr21:46116656 [GRCh38] Chr21:47536570 [GRCh37] Chr21:21q22.3 |
benign|uncertain significance |
NM_001849.4(COL6A2):c.116-7C>T | single nucleotide variant | not provided [RCV000177138] | Chr21:46111972 [GRCh38] Chr21:47531886 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1932G>A (p.Arg644=) | single nucleotide variant | Bethlem myopathy 1A [RCV002517698]|not provided [RCV000176543] | Chr21:46125580 [GRCh38] Chr21:47545494 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1831T>C (p.Cys611Arg) | single nucleotide variant | not provided [RCV000176544] | Chr21:46125479 [GRCh38] Chr21:47545393 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2116G>C (p.Ala706Pro) | single nucleotide variant | Bethlem myopathy 1A [RCV002516711]|not provided [RCV000176644] | Chr21:46125931 [GRCh38] Chr21:47545845 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2098G>A (p.Gly700Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV001368873]|not provided [RCV000176645] | Chr21:46125913 [GRCh38] Chr21:47545827 [GRCh37] Chr21:21q22.3 |
pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.2192C>T (p.Thr731Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000990370]|Ullrich congenital muscular dystrophy 1A [RCV003441146]|not provided [RCV000176647] | Chr21:46126007 [GRCh38] Chr21:47545921 [GRCh37] Chr21:21q22.3 |
likely pathogenic|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2096G>A (p.Gly699Asp) | single nucleotide variant | Bethlem myopathy 1A [RCV000197493]|not provided [RCV000593438] | Chr21:46125911 [GRCh38] Chr21:47545825 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.2761G>T (p.Val921Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV003631097]|not provided [RCV003436986]|not specified [RCV000192614] | Chr21:46132253 [GRCh38] Chr21:47552167 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.892G>A (p.Gly298Arg) | single nucleotide variant | Myopathy [RCV000193638] | Chr21:46116045 [GRCh38] Chr21:47535959 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.138C>T (p.His46=) | single nucleotide variant | Bethlem myopathy 1A [RCV000545828]|COL6A2-related disorder [RCV004734919]|Collagen 6-related myopathy [RCV000349856]|Myosclerosis [RCV000292608]|not specified [RCV000374056] | Chr21:46112001 [GRCh38] Chr21:47531915 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2527C>T (p.Arg843Trp) | single nucleotide variant | Bethlem myopathy 1A [RCV000801298]|not provided [RCV000597570] | Chr21:46132019 [GRCh38] Chr21:47551933 [GRCh37] Chr21:21q22.3 |
pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.568G>A (p.Val190Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001086405]|Collagen 6-related myopathy [RCV000302508]|Myosclerosis [RCV000341130]|not provided [RCV000386408] | Chr21:46112431 [GRCh38] Chr21:47532345 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1312G>A (p.Asp438Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV001859591]|Collagen 6-related myopathy [RCV000383359]|Myosclerosis [RCV000293476]|not provided [RCV000302628] | Chr21:46119830 [GRCh38] Chr21:47539744 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2697G>A (p.Thr899=) | single nucleotide variant | Bethlem myopathy 1A [RCV000546795]|Collagen 6-related myopathy [RCV001143621]|not provided [RCV003431122]|not specified [RCV000609723] | Chr21:46132189 [GRCh38] Chr21:47552103 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2182G>A (p.Val728Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001085703]|Collagen 6-related myopathy [RCV000300120]|Myosclerosis [RCV000359590]|not provided [RCV000363018]|not specified [RCV001731555] | Chr21:46125997 [GRCh38] Chr21:47545911 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.189G>A (p.Thr63=) | single nucleotide variant | Bethlem myopathy 1A [RCV001085020]|Collagen 6-related myopathy [RCV000390977]|Myosclerosis [RCV000300938]|not provided [RCV000379038] | Chr21:46112052 [GRCh38] Chr21:47531966 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2407G>A (p.Asp803Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000548374]|COL6A2-related disorder [RCV004735628]|Inborn genetic diseases [RCV003258877]|not provided [RCV004691912] | Chr21:46126222 [GRCh38] Chr21:47546136 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.*5G>A | single nucleotide variant | Bethlem myopathy 1A [RCV001007855]|Collagen 6-related myopathy [RCV000318994]|Myosclerosis [RCV000261412]|not provided [RCV000326800] | Chr21:46132557 [GRCh38] Chr21:47552471 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1750C>T (p.Pro584Ser) | single nucleotide variant | Collagen 6-related myopathy [RCV000274714]|Inborn genetic diseases [RCV004021112]|Myosclerosis [RCV000329938]|not provided [RCV000343903] | Chr21:46124900 [GRCh38] Chr21:47544814 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2582G>A (p.Arg861Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV001087885]|Collagen 6-related myopathy [RCV000377482]|Myosclerosis [RCV000285371]|not provided [RCV000400296] | Chr21:46132074 [GRCh38] Chr21:47551988 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1140C>T (p.Arg380=) | single nucleotide variant | Bethlem myopathy 1A [RCV001082515]|Collagen 6-related myopathy [RCV000321990]|Myosclerosis [RCV000262159]|not provided [RCV000653640]|not specified [RCV000389129] | Chr21:46118637 [GRCh38] Chr21:47538551 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2634G>A (p.Ala878=) | single nucleotide variant | Bethlem myopathy 1A [RCV001081923]|Collagen 6-related myopathy [RCV000301508]|Myosclerosis [RCV000262696]|not provided [RCV000354320] | Chr21:46132126 [GRCh38] Chr21:47552040 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.791G>A (p.Arg264His) | single nucleotide variant | Bethlem myopathy 1A [RCV000551936]|Collagen 6-related myopathy [RCV000339179]|Myosclerosis [RCV000286457]|not provided [RCV000513122] | Chr21:46114063 [GRCh38] Chr21:47533977 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1817-4_1817-3dup | duplication | Bethlem myopathy 1A [RCV000559178]|Collagen 6-related myopathy [RCV000286795]|Myosclerosis [RCV000377799]|not specified [RCV000388843] | Chr21:46125455..46125456 [GRCh38] Chr21:47545369..47545370 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.1817-8C>A | single nucleotide variant | Bethlem myopathy 1A [RCV001078904]|COL6A2-related disorder [RCV004734917]|Collagen 6-related myopathy [RCV000347425]|Myosclerosis [RCV000287971]|not provided [RCV000366940]|not specified [RCV000784948] | Chr21:46125457 [GRCh38] Chr21:47545371 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2016G>A (p.Glu672=) | single nucleotide variant | Bethlem myopathy 1A [RCV001078838]|Collagen 6-related myopathy [RCV000355457]|Myosclerosis [RCV000265412]|not provided [RCV000329456] | Chr21:46125831 [GRCh38] Chr21:47545745 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.84G>A (p.Pro28=) | single nucleotide variant | Bethlem myopathy 1A [RCV001087725]|COL6A2-related disorder [RCV004543021]|Collagen 6-related myopathy [RCV000381103]|Myosclerosis [RCV000289005]|not provided [RCV000725254]|not specified [RCV000387663] | Chr21:46111560 [GRCh38] Chr21:47531474 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2661G>A (p.Glu887=) | single nucleotide variant | Bethlem myopathy 1A [RCV001086941]|Collagen 6-related myopathy [RCV000266261]|Myosclerosis [RCV000358384]|not provided [RCV000373659] | Chr21:46132153 [GRCh38] Chr21:47552067 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.81G>A (p.Ser27=) | single nucleotide variant | Bethlem myopathy 1A [RCV001082516]|Collagen 6-related myopathy [RCV000289970]|Myosclerosis [RCV000328566]|not provided [RCV000653684]|not specified [RCV000294819] | Chr21:46111557 [GRCh38] Chr21:47531471 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2707G>A (p.Glu903Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000822191]|Collagen 6-related myopathy [RCV000326181]|Myosclerosis [RCV000268727]|not provided [RCV000327831] | Chr21:46132199 [GRCh38] Chr21:47552113 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1489C>A (p.Pro497Thr) | single nucleotide variant | Bethlem myopathy 1A [RCV001087788]|COL6A2-related disorder [RCV004543048]|Collagen 6-related myopathy [RCV000325923]|Myosclerosis [RCV000270832]|not provided [RCV000766751]|not specified [RCV000329762] | Chr21:46121586 [GRCh38] Chr21:47541500 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1970-9G>A | single nucleotide variant | Abnormality of the musculature [RCV001814135]|Bethlem myopathy 1A [RCV000556474]|Bethlem myopathy [RCV001261891]|Collagen 6-related myopathy [RCV000354105]|Muscle weakness [RCV000626815]|Qualitative or quantitative defects of collagen 6 [RCV000844694]|Ullrich congenital muscular dystrophy 1A [RCV002227463]|Ullrich congenital muscular dystrophy 1B [RCV003989514]|not provided [RCV000255313] | Chr21:46125776 [GRCh38] Chr21:47545690 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic|likely benign|conflicting interpretations of pathogenicity|uncertain significance|no classifications from unflagged records |
GRCh37/hg19 21q22.3(chr21:44828064-48097372)x1 | copy number loss | See cases [RCV000449026] | Chr21:44828064..48097372 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1666G>A (p.Glu556Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000554050] | Chr21:46122932 [GRCh38] Chr21:47542846 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.129C>T (p.Cys43=) | single nucleotide variant | Bethlem myopathy 1A [RCV000556363] | Chr21:46111992 [GRCh38] Chr21:47531906 [GRCh37] Chr21:21q22.3 |
likely benign |
GRCh38/hg38 21q22.3(chr21:45850091-46137287)x1 | copy number loss | Breast ductal adenocarcinoma [RCV000207179] | Chr21:45850091..46137287 [GRCh38] Chr21:47270005..47557201 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2905G>C (p.Val969Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV002524981]|not provided [RCV000514208] | Chr21:46132397 [GRCh38] Chr21:47552311 [GRCh37] Chr21:21q22.3 |
uncertain significance |
chr21:45970718..47545826 complex variant | complex | Breast ductal adenocarcinoma [RCV000207279] | Chr21:45970718..47545826 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2843C>G (p.Thr948Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000555014] | Chr21:46132335 [GRCh38] Chr21:47552249 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.332C>T (p.Pro111Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV001347096]|Collagen 6-related myopathy [RCV000305547]|Myosclerosis [RCV000406254]|not provided [RCV000338896] | Chr21:46112195 [GRCh38] Chr21:47532109 [GRCh37] Chr21:21q22.3 |
benign|uncertain significance |
NM_001849.4(COL6A2):c.954G>T (p.Lys318Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV000230758] | Chr21:46116677 [GRCh38] Chr21:47536591 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.2927T>C (p.Leu976Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV000556569]|Bethlem myopathy 1A [RCV000660619]|not provided [RCV000733635] | Chr21:46132419 [GRCh38] Chr21:47552333 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1358G>A (p.Arg453His) | single nucleotide variant | Bethlem myopathy 1A [RCV000685020]|not provided [RCV000726521]|not specified [RCV000234070] | Chr21:46120540 [GRCh38] Chr21:47540454 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.503G>T (p.Ser168Ile) | single nucleotide variant | Bethlem myopathy 1A [RCV001304624]|not provided [RCV003144162]|not specified [RCV000228576] | Chr21:46112366 [GRCh38] Chr21:47532280 [GRCh37] Chr21:21q22.3 |
likely pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.511G>A (p.Gly171Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV001257054]|COL6A2-related disorder [RCV000723333]|Collagen 6-related myopathy [RCV000386454]|Myosclerosis [RCV000329881]|Tip-toe gait [RCV002227938]|not provided [RCV000725047] | Chr21:46112374 [GRCh38] Chr21:47532288 [GRCh37] Chr21:21q22.3 |
likely pathogenic|benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1560C>G (p.Pro520=) | single nucleotide variant | Bethlem myopathy 1A [RCV000872032]|Collagen 6-related myopathy [RCV000331357]|Myosclerosis [RCV000386430]|not provided [RCV001573878]|not specified [RCV000404672] | Chr21:46122146 [GRCh38] Chr21:47542060 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
GRCh37/hg19 21q22.3(chr21:46363553-48080926)x1 | copy number loss | See cases [RCV000239957] | Chr21:46363553..48080926 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.2170C>T (p.Arg724Cys) | single nucleotide variant | Bethlem myopathy 1A [RCV001082860]|Bethlem myopathy [RCV001261892]|COL6A2-related disorder [RCV004535372]|Collagen 6-related myopathy [RCV000335376]|Myosclerosis [RCV000391271]|not provided [RCV000725902] | Chr21:46125985 [GRCh38] Chr21:47545899 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic|benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2422+1G>A | single nucleotide variant | Bethlem myopathy 1A [RCV003326395]|Ullrich congenital muscular dystrophy 1A [RCV000985002]|not provided [RCV000332897] | Chr21:46126238 [GRCh38] Chr21:47546152 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1614C>T (p.Gly538=) | single nucleotide variant | Bethlem myopathy 1A [RCV000527980]|COL6A2-related disorder [RCV004535256]|Collagen 6-related myopathy [RCV000399922]|Myosclerosis [RCV000338651]|not provided [RCV001722385]|not specified [RCV000333735] | Chr21:46122880 [GRCh38] Chr21:47542794 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
GRCh37/hg19 21q11.2-22.3(chr21:15538655-48080926)x1 | copy number loss | See cases [RCV000239948] | Chr21:15538655..48080926 [GRCh37] Chr21:21q11.2-22.3 |
pathogenic |
NM_001849.4(COL6A2):c.492C>T (p.His164=) | single nucleotide variant | Bethlem myopathy 1A [RCV001082800]|COL6A2-related disorder [RCV004535358]|Collagen 6-related myopathy [RCV000365882]|Myosclerosis [RCV000327665]|not provided [RCV000725775]|not specified [RCV000372828] | Chr21:46112355 [GRCh38] Chr21:47532269 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 21q22.3(chr21:47550596-48080926)x1 | copy number loss | See cases [RCV000240055] | Chr21:47550596..48080926 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.2985C>T (p.Ala995=) | single nucleotide variant | Bethlem myopathy 1A [RCV002059124]|Collagen 6-related myopathy [RCV000342638]|Myosclerosis [RCV000398389]|not provided [RCV000372671] | Chr21:46132477 [GRCh38] Chr21:47552391 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.801+1G>T | single nucleotide variant | Bethlem myopathy 1A [RCV001855169]|not provided [RCV000288156] | Chr21:46114074 [GRCh38] Chr21:47533988 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.2646del (p.Phe882fs) | deletion | not provided [RCV000516645] | Chr21:46132136 [GRCh38] Chr21:47552050 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.2284_2285del (p.Met762fs) | deletion | not provided [RCV000342084] | Chr21:46126099..46126100 [GRCh38] Chr21:47546013..47546014 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.857G>T (p.Gly286Val) | single nucleotide variant | not provided [RCV000300421] | Chr21:46116010 [GRCh38] Chr21:47535924 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.1945G>A (p.Ala649Thr) | single nucleotide variant | Bethlem myopathy 1A [RCV000873283]|Collagen 6-related myopathy [RCV000348651]|Myosclerosis [RCV000393023]|not provided [RCV001718584]|not specified [RCV000259742] | Chr21:46125593 [GRCh38] Chr21:47545507 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.955-2A>G | single nucleotide variant | Inborn genetic diseases [RCV000623661] | Chr21:46116768 [GRCh38] Chr21:47536682 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1672-45T>A | single nucleotide variant | not specified [RCV000243654] | Chr21:46124606 [GRCh38] Chr21:47544520 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.1269+32C>T | single nucleotide variant | not provided [RCV001567742]|not specified [RCV000248540] | Chr21:46119151 [GRCh38] Chr21:47539065 [GRCh37] Chr21:21q22.3 |
likely benign |
GRCh37/hg19 21q11.2-22.3(chr21:15410701-48090317)x3 | copy number gain | See cases [RCV000240397] | Chr21:15410701..48090317 [GRCh37] Chr21:21q11.2-22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1672-25C>T | single nucleotide variant | not specified [RCV000248720] | Chr21:46124626 [GRCh38] Chr21:47544540 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.528G>A (p.Gln176=) | single nucleotide variant | Bethlem myopathy 1A [RCV000549361]|Collagen 6-related myopathy [RCV000337966]|Myosclerosis [RCV000280619]|not provided [RCV001697598]|not specified [RCV000243870] | Chr21:46112391 [GRCh38] Chr21:47532305 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2499C>T (p.Asp833=) | single nucleotide variant | not specified [RCV000253699] | Chr21:46131991 [GRCh38] Chr21:47551905 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.1466G>A (p.Arg489Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000526158]|Collagen 6-related myopathy [RCV000360804]|Myosclerosis [RCV000305962]|not provided [RCV000859406]|not specified [RCV000241637] | Chr21:46121563 [GRCh38] Chr21:47541477 [GRCh37] Chr21:21q22.3 |
likely pathogenic|benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2200C>T (p.Arg734Cys) | single nucleotide variant | not provided [RCV003144179]|not specified [RCV000246597] | Chr21:46126015 [GRCh38] Chr21:47545929 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.402C>T (p.Thr134=) | single nucleotide variant | Bethlem myopathy 1A [RCV001451136]|not provided [RCV001731463]|not specified [RCV000248942] | Chr21:46112265 [GRCh38] Chr21:47532179 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2462-2458C>T | single nucleotide variant | not provided [RCV004713458]|not specified [RCV000253808] | Chr21:46129496 [GRCh38] Chr21:46129496..46129497 [GRCh38] Chr21:47549410 [GRCh37] Chr21:47549410..47549411 [GRCh37] Chr21:21q22.3 |
benign |
NM_001849.4(COL6A2):c.2461+11G>A | single nucleotide variant | Bethlem myopathy 1A [RCV002058084]|not specified [RCV000249221] | Chr21:46126552 [GRCh38] Chr21:47546466 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2461+42G>A | single nucleotide variant | not specified [RCV000254013] | Chr21:46126583 [GRCh38] Chr21:47546497 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2423-48C>T | single nucleotide variant | not specified [RCV000244465] | Chr21:46126455 [GRCh38] Chr21:47546369 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2178T>C (p.Phe726=) | single nucleotide variant | Bethlem myopathy 1A [RCV001493730] | Chr21:46125993 [GRCh38] Chr21:47545907 [GRCh37] Chr21:21q22.3 |
likely benign |
GRCh37/hg19 21q22.3(chr21:46682125-48090317)x3 | copy number gain | See cases [RCV000240574] | Chr21:46682125..48090317 [GRCh37] Chr21:21q22.3 |
likely pathogenic |
NM_001849.4(COL6A2):c.2607C>T (p.Asp869=) | single nucleotide variant | Bethlem myopathy 1A [RCV000552987]|Collagen 6-related myopathy [RCV000355073]|Myosclerosis [RCV000297922]|not provided [RCV001705360]|not specified [RCV000242043] | Chr21:46132099 [GRCh38] Chr21:47552013 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2423-18_2423-17insCGGCCCGGCCCGGCC | microsatellite | not specified [RCV000249502] | Chr21:46126476..46126477 [GRCh38] Chr21:47546390..47546391 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_058174.3(COL6A2):c.2649C>T (p.Phe883=) | single nucleotide variant | Bethlem myopathy 1A [RCV002494772]|COL6A2-related disorder [RCV004529450]|not provided [RCV001572789] | Chr21:46129383 [GRCh38] Chr21:47549297 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.1672-12G>A | single nucleotide variant | Bethlem myopathy 1A [RCV002058083]|Collagen 6-related myopathy [RCV001143417]|not specified [RCV000252172] | Chr21:46124639 [GRCh38] Chr21:47544553 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_001849.4(COL6A2):c.2043C>T (p.Ile681=) | single nucleotide variant | Bethlem myopathy 1A [RCV000887661]|not specified [RCV000242396] | Chr21:46125858 [GRCh38] Chr21:47545772 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.802-45C>T | single nucleotide variant | not provided [RCV004703530]|not specified [RCV000244847] | Chr21:46115827 [GRCh38] Chr21:47535741 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.1116+39C>T | single nucleotide variant | not provided [RCV001582819]|not specified [RCV000252279] | Chr21:46117975 [GRCh38] Chr21:47537889 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.1609-46A>G | single nucleotide variant | not specified [RCV000242626] | Chr21:46122829 [GRCh38] Chr21:47542743 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2843C>T (p.Thr948Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001220060]|not provided [RCV000521529] | Chr21:46132335 [GRCh38] Chr21:47552249 [GRCh37] Chr21:21q22.3 |
uncertain significance |
GRCh37/hg19 21q22.3(chr21:47516746-47556220)x1 | copy number loss | See cases [RCV000240584] | Chr21:47516746..47556220 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1269+32C>G | single nucleotide variant | not specified [RCV000245431] | Chr21:46119151 [GRCh38] Chr21:47539065 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2600G>A (p.Arg867Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000555328]|Collagen 6-related myopathy [RCV001141816]|not provided [RCV001722306]|not specified [RCV000250264] | Chr21:46132092 [GRCh38] Chr21:47552006 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.2462-12G>A | single nucleotide variant | Bethlem myopathy 1A [RCV002058085]|not provided [RCV001705359]|not specified [RCV000245829] | Chr21:46131942 [GRCh38] Chr21:47551856 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2461+2643G>A | single nucleotide variant | not specified [RCV000245831] | Chr21:46129184 [GRCh38] Chr21:47549098 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2031C>T (p.Asp677=) | single nucleotide variant | Bethlem myopathy 1A [RCV001506284]|not provided [RCV000725361]|not specified [RCV000245843] | Chr21:46125846 [GRCh38] Chr21:47545760 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1674G>A (p.Ala558=) | single nucleotide variant | Bethlem myopathy 1A [RCV001081672]|Collagen 6-related myopathy [RCV000303949]|Myosclerosis [RCV000393933]|not provided [RCV000730302] | Chr21:46124653 [GRCh38] Chr21:47544567 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2264C>T (p.Thr755Met) | single nucleotide variant | Collagen 6-related myopathy [RCV000329879]|Myosclerosis [RCV000274653] | Chr21:46126079 [GRCh38] Chr21:47545993 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1013G>A (p.Arg338His) | single nucleotide variant | Bethlem myopathy 1A [RCV001214463]|Collagen 6-related myopathy [RCV000262016]|Myosclerosis [RCV000368303] | Chr21:46117413 [GRCh38] Chr21:47537327 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.649G>A (p.Ala217Thr) | single nucleotide variant | Bethlem myopathy 1A [RCV001865241]|Collagen 6-related myopathy [RCV000270969]|Myosclerosis [RCV000363224]|not provided [RCV000512764] | Chr21:46112512 [GRCh38] Chr21:47532426 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.903C>T (p.Gly301=) | single nucleotide variant | Bethlem myopathy 1A [RCV001497963]|COL6A2-related disorder [RCV004544634]|Collagen 6-related myopathy [RCV000350942]|Myosclerosis [RCV000307613] | Chr21:46116379 [GRCh38] Chr21:47536293 [GRCh37] Chr21:21q22.3 |
likely benign |
NM_001849.4(COL6A2):c.2986G>A (p.Val996Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000551844]|Collagen 6-related myopathy [RCV000365215]|Myosclerosis [RCV000308256] | Chr21:46132478 [GRCh38] Chr21:47552392 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2197G>A (p.Gly733Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000477924]|Bethlem myopathy 1A [RCV001303665]|Inborn genetic diseases [RCV001265687]|not provided [RCV000337022] | Chr21:46126012 [GRCh38] Chr21:47545926 [GRCh37] Chr21:21q22.3 |
pathogenic|uncertain significance |
NM_001849.4(COL6A2):c.188C>T (p.Thr63Met) | single nucleotide variant | Bethlem myopathy 1A [RCV001223613]|not provided [RCV000337273] | Chr21:46112051 [GRCh38] Chr21:47531965 [GRCh37] Chr21:21q22.3 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.729C>T (p.Tyr243=) | single nucleotide variant | Bethlem myopathy 1A [RCV002519166]|not provided [RCV000336271] | Chr21:46112818 [GRCh38] Chr21:47532732 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1771-8C>T | single nucleotide variant | not provided [RCV000372540] | Chr21:46125258 [GRCh38] Chr21:47545172 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.446G>A (p.Arg149His) | single nucleotide variant | Bethlem myopathy 1A [RCV001070638]|Collagen 6-related myopathy [RCV001143206]|Inborn genetic diseases [RCV004609342]|not provided [RCV000372608] | Chr21:46112309 [GRCh38] Chr21:47532223 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.567C>T (p.Ala189=) | single nucleotide variant | Bethlem myopathy 1A [RCV001859709]|not provided [RCV000726434]|not specified [RCV000374520] | Chr21:46112430 [GRCh38] Chr21:47532344 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2856G>A (p.Thr952=) | single nucleotide variant | Bethlem myopathy 1A [RCV000543489]|Collagen 6-related myopathy [RCV000271477]|Myosclerosis [RCV000363750]|not provided [RCV001573730]|not specified [RCV000428231] | Chr21:46132348 [GRCh38] Chr21:47552262 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.620C>G (p.Thr207Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV002523192]|Collagen 6-related myopathy [RCV000393856]|Myosclerosis [RCV000310823]|not provided [RCV001569668] | Chr21:46112483 [GRCh38] Chr21:47532397 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1779C>T (p.Asp593=) | single nucleotide variant | Bethlem myopathy 1A [RCV001423757]|Collagen 6-related myopathy [RCV001139087]|not provided [RCV000271536] | Chr21:46125274 [GRCh38] Chr21:47545188 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.-6G>A | single nucleotide variant | not provided [RCV000270525] | Chr21:46111471 [GRCh38] Chr21:47531385 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2702_2722del (p.Ile901_Thr907del) | deletion | not provided [RCV000272353] | Chr21:46132191..46132211 [GRCh38] Chr21:47552105..47552125 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1550A>C (p.Tyr517Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV001859646]|not provided [RCV000272543] | Chr21:46122136 [GRCh38] Chr21:47542050 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.94G>A (p.Glu32Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV002519342]|not provided [RCV000306725] | Chr21:46111570 [GRCh38] Chr21:47531484 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.581A>G (p.Gln194Arg) | single nucleotide variant | Bethlem myopathy 1A [RCV000653566]|not provided [RCV000339215] | Chr21:46112444 [GRCh38] Chr21:47532358 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2711C>T (p.Ala904Val) | single nucleotide variant | Bethlem myopathy 1A [RCV000559325]|not provided [RCV000340331] | Chr21:46132203 [GRCh38] Chr21:47552117 [GRCh37] Chr21:21q22.3 |
benign|uncertain significance |
NM_001849.4(COL6A2):c.2392_2394del (p.Ile798del) | deletion | not provided [RCV000375240] | Chr21:46126205..46126207 [GRCh38] Chr21:47546119..47546121 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1054-13_1054-10del | deletion | not provided [RCV000376703] | Chr21:46117858..46117861 [GRCh38] Chr21:47537775..47537778 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2523C>T (p.Ser841=) | single nucleotide variant | Bethlem myopathy 1A [RCV000955634]|Collagen 6-related myopathy [RCV000274976]|Myosclerosis [RCV000332359]|not specified [RCV000604934] | Chr21:46132015 [GRCh38] Chr21:47551929 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.*106G>A | single nucleotide variant | Collagen 6-related myopathy [RCV000274174]|Myosclerosis [RCV000368776] | Chr21:46132658 [GRCh38] Chr21:47552572 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.1911C>T (p.Phe637=) | single nucleotide variant | Bethlem myopathy 1A [RCV002523193]|Collagen 6-related myopathy [RCV000390038]|Myosclerosis [RCV000312456] | Chr21:46125559 [GRCh38] Chr21:47545473 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2503G>A (p.Val835Ile) | single nucleotide variant | Bethlem myopathy 1A [RCV000548967]|COL6A2-related disorder [RCV004544635]|Collagen 6-related myopathy [RCV000363818]|Myosclerosis [RCV000391579]|not specified [RCV000609856] | Chr21:46131995 [GRCh38] Chr21:47551909 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.1706G>A (p.Arg569Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000873809]|Collagen 6-related myopathy [RCV000393901]|Myosclerosis [RCV000363263]|not provided [RCV001812879]|not specified [RCV000593658] | Chr21:46124685 [GRCh38] Chr21:47544599 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.848G>A (p.Gly283Glu) | single nucleotide variant | Bethlem myopathy 1A [RCV000591727]|not provided [RCV000657920] | Chr21:46115918 [GRCh38] Chr21:47535832 [GRCh37] Chr21:21q22.3 |
pathogenic|likely pathogenic |
NM_001849.4(COL6A2):c.900+1G>C | single nucleotide variant | not provided [RCV000594273] | Chr21:46116054 [GRCh38] Chr21:47535968 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1899G>A (p.Leu633=) | single nucleotide variant | Bethlem myopathy 1A [RCV000543141]|not specified [RCV000273776] | Chr21:46125547 [GRCh38] Chr21:47545461 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.1947T>C (p.Ala649=) | single nucleotide variant | not provided [RCV000274470] | Chr21:46125595 [GRCh38] Chr21:47545509 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1031G>A (p.Cys344Tyr) | single nucleotide variant | not provided [RCV000307797] | Chr21:46117431 [GRCh38] Chr21:47537345 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2567T>C (p.Val856Ala) | single nucleotide variant | Bethlem myopathy 1A [RCV001213119]|not provided [RCV000307897] | Chr21:46132059 [GRCh38] Chr21:47551973 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.288C>T (p.Tyr96=) | single nucleotide variant | Bethlem myopathy 1A [RCV001079446]|not provided [RCV000726012] | Chr21:46112151 [GRCh38] Chr21:47532065 [GRCh37] Chr21:21q22.3 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.999G>A (p.Lys333=) | single nucleotide variant | not provided [RCV000341322] | Chr21:46116814 [GRCh38] Chr21:47536728 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1702C>T (p.Pro568Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV001325819]|not provided [RCV000343057] | Chr21:46124681 [GRCh38] Chr21:47544595 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1359C>T (p.Arg453=) | single nucleotide variant | Bethlem myopathy 1A [RCV001409461]|Collagen 6-related myopathy [RCV001136744]|not provided [RCV000378532] | Chr21:46120541 [GRCh38] Chr21:47540455 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.3034G>A (p.Asp1012Asn) | single nucleotide variant | Bethlem myopathy 1A [RCV002057780]|Collagen 6-related myopathy [RCV000368594]|Myosclerosis [RCV000276274]|not provided [RCV000597101] | Chr21:46132526 [GRCh38] Chr21:47552440 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2978G>A (p.Arg993His) | single nucleotide variant | Bethlem myopathy 1A [RCV001343854]|COL6A2-related disorder [RCV004735492]|Collagen 6-related myopathy [RCV000278533]|Myosclerosis [RCV000389290]|not provided [RCV003137965] | Chr21:46132470 [GRCh38] Chr21:47552384 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.*88G>C | single nucleotide variant | Collagen 6-related myopathy [RCV000313405]|Myosclerosis [RCV000370413]|not provided [RCV004703853] | Chr21:46132640 [GRCh38] Chr21:47552554 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.1396-11_1396-2del | deletion | not provided [RCV000407366] | Chr21:46121050..46121059 [GRCh38] Chr21:47540964..47540973 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.2351G>C (p.Arg784Pro) | single nucleotide variant | Bethlem myopathy 1A [RCV001043411]|not provided [RCV000275548] | Chr21:46126166 [GRCh38] Chr21:47546080 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2798G>A (p.Arg933His) | single nucleotide variant | Bethlem myopathy 1A [RCV000553120]|Collagen 6-related myopathy [RCV001139298]|not provided [RCV000276018] | Chr21:46132290 [GRCh38] Chr21:47552204 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.436C>T (p.Arg146Trp) | single nucleotide variant | Bethlem myopathy 1A [RCV001064201]|not provided [RCV000276188] | Chr21:46112299 [GRCh38] Chr21:47532213 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2423-11CT[2] | microsatellite | Bethlem myopathy 1A [RCV001461344]|not provided [RCV000276559] | Chr21:46126492..46126493 [GRCh38] Chr21:47546410..47546411 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2538G>A (p.Glu846=) | single nucleotide variant | Bethlem myopathy 1A [RCV001087563]|not provided [RCV000276191] | Chr21:46132030 [GRCh38] Chr21:47551944 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2968C>G (p.Leu990Val) | single nucleotide variant | not provided [RCV000309757] | Chr21:46132460 [GRCh38] Chr21:47552374 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2454C>T (p.Cys818=) | single nucleotide variant | Bethlem myopathy 1A [RCV001088833]|not provided [RCV000309788] | Chr21:46126534 [GRCh38] Chr21:47546448 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2995G>A (p.Glu999Lys) | single nucleotide variant | Bethlem myopathy 1A [RCV000800095]|Inborn genetic diseases [RCV002518099]|not provided [RCV000311292] | Chr21:46132487 [GRCh38] Chr21:47552401 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1130G>A (p.Arg377His) | single nucleotide variant | Bethlem myopathy 1A [RCV000699520]|not provided [RCV000343634] | Chr21:46118627 [GRCh38] Chr21:47538541 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2968C>T (p.Leu990=) | single nucleotide variant | Bethlem myopathy 1A [RCV001457744]|not provided [RCV000343973] | Chr21:46132460 [GRCh38] Chr21:47552374 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2940G>A (p.Val980=) | single nucleotide variant | Bethlem myopathy 1A [RCV001461030]|not provided [RCV000345034] | Chr21:46132432 [GRCh38] Chr21:47552346 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.229T>C (p.Phe77Leu) | single nucleotide variant | Bethlem myopathy 1A [RCV000532885]|not provided [RCV000380636] | Chr21:46112092 [GRCh38] Chr21:47532006 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.3058T>C (p.Ter1020Gln) | single nucleotide variant | not provided [RCV000380796] | Chr21:46132550 [GRCh38] Chr21:47552464 [GRCh37] Chr21:21q22.3 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1969+4A>C | single nucleotide variant | Bethlem myopathy 1A [RCV000820669]|Myosclerosis [RCV001330650]|not provided [RCV000380032] | Chr21:46125621 [GRCh38] Chr21:47545535 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1332+10C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001088912]|not provided [RCV000380258] | Chr21:46119860 [GRCh38] Chr21:47539774 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.*31C>T | single nucleotide variant | Collagen 6-related myopathy [RCV000283628]|Myosclerosis [RCV000375979] | Chr21:46132583 [GRCh38] Chr21:47552497 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.*66C>G | single nucleotide variant | Collagen 6-related myopathy [RCV000399452]|Myosclerosis [RCV000348351] | Chr21:46132618 [GRCh38] Chr21:47552532 [GRCh37] Chr21:21q22.3 |
benign|likely benign |
NM_001849.4(COL6A2):c.537G>A (p.Arg179=) | single nucleotide variant | Collagen 6-related myopathy [RCV000280177]|Myosclerosis [RCV000371578] | Chr21:46112400 [GRCh38] Chr21:47532314 [GRCh37] Chr21:21q22.3 |
benign|uncertain significance |
NM_001849.4(COL6A2):c.1053+2del | deletion | not provided [RCV000311973] | Chr21:46117455 [GRCh38] Chr21:47537369 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1860C>T (p.Ile620=) | single nucleotide variant | Bethlem myopathy 1A [RCV001475051]|not provided [RCV000277859] | Chr21:46125508 [GRCh38] Chr21:47545422 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2810G>A (p.Arg937Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000542705]|not provided [RCV000725046] | Chr21:46132302 [GRCh38] Chr21:47552216 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.2483C>T (p.Thr828Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000699042]|Collagen 6-related myopathy [RCV001139200]|Inborn genetic diseases [RCV003343746]|not provided [RCV000278481] | Chr21:46131975 [GRCh38] Chr21:47551889 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2626C>T (p.Arg876Cys) | single nucleotide variant | not provided [RCV000278725] | Chr21:46132118 [GRCh38] Chr21:47552032 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.627C>T (p.His209=) | single nucleotide variant | Bethlem myopathy 1A [RCV002059299]|not provided [RCV000279429] | Chr21:46112490 [GRCh38] Chr21:47532404 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2960C>T (p.Thr987Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000653564]|not provided [RCV000312881] | Chr21:46132452 [GRCh38] Chr21:47552366 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2377G>A (p.Val793Ile) | single nucleotide variant | not provided [RCV000313235] | Chr21:46126192 [GRCh38] Chr21:47546106 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.1356C>T (p.Pro452=) | single nucleotide variant | Bethlem myopathy 1A [RCV000653653]|not provided [RCV000344911] | Chr21:46120538 [GRCh38] Chr21:47540452 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.2844G>A (p.Thr948=) | single nucleotide variant | Bethlem myopathy 1A [RCV001855079]|not provided [RCV000345672] | Chr21:46132336 [GRCh38] Chr21:47552250 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.1970-10C>T | single nucleotide variant | Bethlem myopathy 1A [RCV001080623]|Collagen 6-related myopathy [RCV001141702]|not provided [RCV000382585] | Chr21:46125775 [GRCh38] Chr21:47545689 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.1348G>C (p.Glu450Gln) | single nucleotide variant | Bethlem myopathy 1A [RCV000537812]|not provided [RCV000383351] | Chr21:46120530 [GRCh38] Chr21:47540444 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.3025G>A (p.Gly1009Ser) | single nucleotide variant | Bethlem myopathy 1A [RCV001081285]|Inborn genetic diseases [RCV002521980]|not provided [RCV000382527] | Chr21:46132517 [GRCh38] Chr21:47552431 [GRCh37] Chr21:21q22.3 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001849.4(COL6A2):c.2575G>A (p.Val859Met) | single nucleotide variant | Bethlem myopathy 1A [RCV000794426]|Collagen 6-related myopathy [RCV000281777]|Myosclerosis [RCV000320418]|not provided [RCV000593147] | Chr21:46132067 [GRCh38] Chr21:47551981 [GRCh37] Chr21:21q22.3 |
benign|likely benign|uncertain significance |
NM_001849.4(COL6A2):c.*147C>T | single nucleotide variant | Collagen 6-related myopathy [RCV000336914]|Myosclerosis [RCV000281913] | Chr21:46132699 [GRCh38] Chr21:47552613 [GRCh37] Chr21:21q22.3 |
likely benign|uncertain significance |
NM_001849.4(COL6A2):c.*139G>A | single nucleotide variant | Collagen 6-related myopathy [RCV000321862]|Myosclerosis [RCV000376550] | Chr21:46132691 [GRCh38] Chr21:47552605 [GRCh37] Chr21:21q22.3 |
uncertain significance |
NM_001849.4(COL6A2):c.865G>T (p.Gly289Cys) | single nucleotide variant | not provided [RCV000320945] | Chr21:46116018 [GRCh38] Chr21:47535932 [GRCh37] Chr21:21q22.3 |
pathogenic |
NM_001849.4(COL6A2):c.1770+1del | deletion | Bethlem myopathy 1A [RCV002519323]|COL6A2-related disorder [RCV004535433]|not provided [RCV000519128] | Chr21:46124920 [GRCh38] Chr21:47544834 [GRCh37] |