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Gene: CLCN6 (chloride voltage-gated channel 6) Homo sapiens
Symbol: CLCN6
Name: chloride voltage-gated channel 6
Description: Predicted to have chloride transmembrane transporter activity. Predicted to be involved in ion transmembrane transport. Localizes to lysosomal membrane. Implicated in coronary artery disease.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: chloride channel 6; chloride channel protein 6; chloride channel, voltage-sensitive 6; chloride transport protein 6; CLC-6; KIAA0046
Mus musculus (house mouse) : Clcn6 (chloride channel, voltage-sensitive 6)  MGI  Alliance
Rattus norvegicus (Norway rat) : Clcn6 (chloride voltage-gated channel 6)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Clcn6 (chloride voltage-gated channel 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CLCN6 (chloride voltage-gated channel 6)
Canis lupus familiaris (dog) : CLCN6 (chloride voltage-gated channel 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Clcn6 (chloride voltage-gated channel 6)
Sus scrofa (pig) : CLCN6 (chloride voltage-gated channel 6)
Chlorocebus sabaeus (African green monkey) : CLCN6 (chloride voltage-gated channel 6)
Heterocephalus glaber (naked mole-rat) : Clcn6 (chloride voltage-gated channel 6)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38.p13 Ensembl111,806,096 - 11,848,079 (+)EnsemblGRCh38hg38GRCh38
GRCh38111,806,096 - 11,843,144 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37111,866,153 - 11,903,201 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36111,788,794 - 11,825,788 (+)NCBINCBI36hg18NCBI36
Celera110,979,829 - 11,016,824 (+)NCBI
Cytogenetic Map1p36.22NCBI
HuRef111,021,210 - 11,058,258 (+)NCBIHuRef
CHM1_1111,854,047 - 11,891,095 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
More on CLCN6
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1313372
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-08-04
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.