Emilin2 (elastin microfibril interfacer 2) - Rat Genome Database

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Gene: Emilin2 (elastin microfibril interfacer 2) Mus musculus
Analyze
Symbol: Emilin2
Name: elastin microfibril interfacer 2
RGD ID: 1313317
MGI Page MGI
Description: Predicted to enable extracellular matrix constituent conferring elasticity. Involved in positive regulation of blood coagulation. Located in collagen-containing extracellular matrix. Is expressed in several structures, including early conceptus; embryo mesenchyme; genitourinary system; heart; and hemolymphoid system gland. Orthologous to human EMILIN2 (elastin microfibril interfacer 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: b; basilin; elastin microfibril interface located protein 2; elastin microfibril interface-located protein 2; EMILIN-2; FOAP; FOAP-10
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391771,559,167 - 71,618,551 (-)NCBIGRCm39mm39
GRCm39 Ensembl1771,559,167 - 71,618,973 (-)Ensembl
GRCm381771,252,172 - 71,311,556 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1771,252,172 - 71,311,978 (-)EnsemblGRCm38mm10GRCm38
MGSCv371771,601,516 - 71,660,305 (-)NCBIGRCm37mm9NCBIm37
MGSCv361771,154,355 - 71,216,323 (-)NCBImm8
Celera1775,520,092 - 75,581,836 (-)NCBICelera
Cytogenetic Map17E1.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12221002   PMID:12466851   PMID:12477932   PMID:12837629   PMID:14996434   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:18554416   PMID:20700597   PMID:21267068   PMID:21873635   PMID:22159717   PMID:22566882   PMID:23658023   PMID:24006456   PMID:25445627   PMID:25658937   PMID:28526753   PMID:29483644  
PMID:32948785   PMID:35012633  


Genomics

Comparative Map Data
Emilin2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391771,559,167 - 71,618,551 (-)NCBIGRCm39mm39
GRCm39 Ensembl1771,559,167 - 71,618,973 (-)Ensembl
GRCm381771,252,172 - 71,311,556 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1771,252,172 - 71,311,978 (-)EnsemblGRCm38mm10GRCm38
MGSCv371771,601,516 - 71,660,305 (-)NCBIGRCm37mm9NCBIm37
MGSCv361771,154,355 - 71,216,323 (-)NCBImm8
Celera1775,520,092 - 75,581,836 (-)NCBICelera
Cytogenetic Map17E1.3NCBI
EMILIN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38182,846,232 - 2,916,003 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl182,847,006 - 2,916,003 (+)EnsemblGRCh38hg38GRCh38
GRCh37182,847,004 - 2,916,001 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36182,837,028 - 2,904,090 (+)NCBINCBI36hg18NCBI36
Build 34182,837,027 - 2,904,088NCBI
Celera182,722,463 - 2,789,538 (+)NCBI
Cytogenetic Map18p11.32-p11.31NCBI
HuRef182,808,350 - 2,875,373 (+)NCBIHuRef
CHM1_1182,846,395 - 2,913,454 (+)NCBICHM1_1
Emilin2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.29111,160,708 - 111,220,463 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl9111,160,712 - 111,220,352 (-)Ensembl
Rnor_6.09119,594,049 - 119,653,675 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl9119,594,629 - 119,653,255 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.09119,047,568 - 119,106,639 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.49110,458,062 - 110,488,722 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.19110,668,124 - 110,751,827 (-)NCBI
Celera9108,289,680 - 108,349,263 (-)NCBICelera
Cytogenetic Map9q38NCBI
Emilin2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554027,508,159 - 7,519,977 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554027,507,674 - 7,519,978 (-)NCBIChiLan1.0ChiLan1.0
EMILIN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11813,678,090 - 13,743,075 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1813,678,772 - 13,743,346 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01811,368,328 - 11,435,808 (-)NCBIMhudiblu_PPA_v0panPan3
EMILIN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1769,521,430 - 69,580,963 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha768,976,680 - 69,036,232 (+)NCBI
ROS_Cfam_1.0769,583,656 - 69,642,665 (+)NCBI
ROS_Cfam_1.0 Ensembl769,584,913 - 69,643,162 (+)Ensembl
UMICH_Zoey_3.1769,266,531 - 69,325,009 (+)NCBI
UNSW_CanFamBas_1.0769,286,034 - 69,345,061 (+)NCBI
UU_Cfam_GSD_1.0769,583,984 - 69,642,505 (+)NCBI
Emilin2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494465,880,202 - 65,931,886 (+)NCBI
SpeTri2.0NW_0049366721,607,914 - 1,661,531 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EMILIN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6103,730,622 - 103,786,929 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16103,730,618 - 103,786,921 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2696,739,144 - 96,792,557 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EMILIN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11862,110,324 - 62,171,066 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1862,110,616 - 62,170,384 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605036,965,893 - 37,026,280 (+)NCBIVero_WHO_p1.0
Emilin2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477013,133,319 - 13,156,420 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
AI428560  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381771,252,232 - 71,252,344UniSTSGRCm38
MGSCv371771,601,572 - 71,601,684UniSTSGRCm37
Celera1775,520,148 - 75,520,260UniSTS
Cytogenetic Map17E1.3UniSTS
Whitehead/MRC_RH17843.63UniSTS
RH130840  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381771,252,222 - 71,252,450UniSTSGRCm38
MGSCv371771,601,562 - 71,601,790UniSTSGRCm37
Celera1775,520,138 - 75,520,366UniSTS
Cytogenetic Map17E1.3UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
1300592Pcyts5_mplasmacytoma susceptibility 5 (mouse)Not determined173871288772712970Mouse
10755525Lymph2_mlymphocyte differential 2 (mouse)173880562672805626Mouse
10755534Lymph4_mlymphocyte differential 4 (mouse)173880562672805626Mouse
4141319Hmtb8_mhemostasis and thrombosis rebleeding time 8 (mouse)Not determined4053444774534623Mouse
15039324Nmrs48_mNAFLD-associated magnetic resonance shift 48 (mouse)174093918774939187Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5753444780885776Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
13464254Ifvrq3_minfluenza virus resistance QTL 3 (mouse)176795765583908089Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
11565819Ppipq1_mprepulse inhibition percentage QTL 1 (mouse)177105765575377655Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir320mmu-miR-320-3pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI22179046

Predicted Target Of
Summary Value
Count of predictions:238
Count of miRNA genes:189
Interacting mature miRNAs:207
Transcripts:ENSMUST00000024849
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001357336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC126942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF468645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY232991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY582438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GQ872457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GQ872460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000024849   ⟹   ENSMUSP00000024849
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,559,168 - 71,617,956 (-)Ensembl
GRCm38.p6 Ensembl1771,252,173 - 71,310,961 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232777   ⟹   ENSMUSP00000156894
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,559,169 - 71,617,954 (-)Ensembl
GRCm38.p6 Ensembl1771,252,174 - 71,310,959 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233057   ⟹   ENSMUSP00000156446
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,559,167 - 71,617,985 (-)Ensembl
GRCm38.p6 Ensembl1771,252,172 - 71,310,990 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233083
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,559,898 - 71,562,401 (-)Ensembl
GRCm38.p6 Ensembl1771,252,903 - 71,255,406 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233148   ⟹   ENSMUSP00000156837
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,560,012 - 71,575,592 (-)Ensembl
GRCm38.p6 Ensembl1771,253,017 - 71,268,597 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233245   ⟹   ENSMUSP00000156676
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,559,169 - 71,618,551 (-)Ensembl
GRCm38.p6 Ensembl1771,252,174 - 71,311,556 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233343   ⟹   ENSMUSP00000156856
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,582,181 - 71,604,242 (-)Ensembl
GRCm38.p6 Ensembl1771,275,186 - 71,297,247 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233659
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,618,534 - 71,618,973 (-)Ensembl
GRCm38.p6 Ensembl1771,311,539 - 71,311,978 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233677
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,562,668 - 71,563,341 (-)Ensembl
GRCm38.p6 Ensembl1771,255,673 - 71,256,346 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233698
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,563,534 - 71,572,024 (-)Ensembl
GRCm38.p6 Ensembl1771,256,539 - 71,265,029 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233728   ⟹   ENSMUSP00000156732
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1771,582,187 - 71,617,276 (-)Ensembl
GRCm38.p6 Ensembl1771,275,192 - 71,310,281 (-)Ensembl
RefSeq Acc Id: NM_001357336   ⟹   NP_001344265
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391771,559,167 - 71,618,551 (-)NCBI
GRCm381771,252,172 - 71,311,556 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357337   ⟹   NP_001344266
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391771,559,167 - 71,618,006 (-)NCBI
GRCm381771,252,172 - 71,311,011 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357338   ⟹   NP_001344267
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391771,559,167 - 71,618,006 (-)NCBI
GRCm381771,252,172 - 71,311,011 (-)NCBI
Sequence:
RefSeq Acc Id: NM_145158   ⟹   NP_660140
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391771,559,167 - 71,618,006 (-)NCBI
GRCm381771,252,172 - 71,311,011 (-)NCBI
MGSCv371771,601,516 - 71,660,305 (-)RGD
Celera1775,520,092 - 75,581,836 (-)RGD
cM Map17 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_660140   ⟸   NM_145158
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8K482 (UniProtKB/Swiss-Prot),   Q3U1J9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001344265   ⟸   NM_001357336
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001344266   ⟸   NM_001357337
- Peptide Label: isoform 3 precursor
RefSeq Acc Id: NP_001344267   ⟸   NM_001357338
- Peptide Label: isoform 4 precursor
RefSeq Acc Id: ENSMUSP00000156732   ⟸   ENSMUST00000233728
RefSeq Acc Id: ENSMUSP00000156837   ⟸   ENSMUST00000233148
RefSeq Acc Id: ENSMUSP00000156446   ⟸   ENSMUST00000233057
RefSeq Acc Id: ENSMUSP00000156856   ⟸   ENSMUST00000233343
RefSeq Acc Id: ENSMUSP00000156676   ⟸   ENSMUST00000233245
RefSeq Acc Id: ENSMUSP00000156894   ⟸   ENSMUST00000232777
RefSeq Acc Id: ENSMUSP00000024849   ⟸   ENSMUST00000024849
Protein Domains
C1q   Collagen-like   EMI

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K482-F1-model_v2 AlphaFold Q8K482 1-1074 view protein structure

Promoters
RGD ID:13676720
Promoter ID:EPDNEW_M22509
Type:initiation region
Name:Emilin2_1
Description:Mus musculus elastin microfibril interfacer 2 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381771,310,934 - 71,310,994EPDNEW
RGD ID:6847382
Promoter ID:MM_ACW:23456
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour,   ES_Cell
Transcripts:EMILIN2.HSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361771,605,471 - 71,605,971 (-)MPROMDB
RGD ID:6847383
Promoter ID:MM_ACW:23457
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   Spleen
Transcripts:EMILIN2.ISEP07,   EMILIN2.JSEP07,   EMILIN2.KSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361771,605,671 - 71,606,171 (-)MPROMDB
RGD ID:6848682
Promoter ID:MM_TRO:4500
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:MTR009465.17.1885.2,   MTR009465.17.1885.3
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361771,659,691 - 71,660,191 (-)MPROMDB
RGD ID:6828037
Promoter ID:MM_KWN:24130
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Spleen
Transcripts:ENSMUST00000024849,   UC008DMF.1,   UC008DMG.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361771,659,994 - 71,660,494 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2389136 AgrOrtholog
Ensembl Genes ENSMUSG00000024053 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000024849 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000156446 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000156676 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000156732 UniProtKB/TrEMBL
  ENSMUSP00000156837 UniProtKB/TrEMBL
  ENSMUSP00000156856 UniProtKB/TrEMBL
  ENSMUSP00000156894 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000024849 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000232777 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000233057 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000233148 UniProtKB/TrEMBL
  ENSMUST00000233245 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000233343 UniProtKB/TrEMBL
  ENSMUST00000233728 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C1q_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EMI_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tumour_necrosis_fac-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:246707 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2389136 ENTREZGENE
NCBI Gene 246707 ENTREZGENE
Pfam C1q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EMI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Emilin2 PhenoGen
PROSITE C1Q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EMI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART C1Q UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49842 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3B2W437_MOUSE UniProtKB/TrEMBL
  A0A3B2W4E4_MOUSE UniProtKB/TrEMBL
  A0A3B2W846_MOUSE UniProtKB/TrEMBL
  A0A3B2WB50_MOUSE UniProtKB/TrEMBL
  A0A3B2WD46_MOUSE UniProtKB/TrEMBL
  D0ESZ4_MOUSE UniProtKB/TrEMBL
  EMIL2_MOUSE UniProtKB/Swiss-Prot
  Q3TBC8_MOUSE UniProtKB/TrEMBL
  Q3TBD3_MOUSE UniProtKB/TrEMBL
  Q3TCC1_MOUSE UniProtKB/TrEMBL
  Q3TDB5_MOUSE UniProtKB/TrEMBL
  Q3TDP9_MOUSE UniProtKB/TrEMBL
  Q3U1J9 ENTREZGENE, UniProtKB/TrEMBL
  Q8K482 ENTREZGENE