Arhgap9 (Rho GTPase activating protein 9) - Rat Genome Database

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Gene: Arhgap9 (Rho GTPase activating protein 9) Mus musculus
Analyze
Symbol: Arhgap9
Name: Rho GTPase activating protein 9
RGD ID: 1313315
MGI Page MGI
Description: Predicted to enable GTPase activator activity and phosphatidylinositol-3,4,5-trisphosphate binding activity. Predicted to be active in cytoplasm. Is expressed in thymus primordium. Orthologous to human ARHGAP9 (Rho GTPase activating protein 9).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AU043488; MGC37568; rho GTPase-activating protein 9
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,157,829 - 127,165,816 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,157,833 - 127,165,812 (+)EnsemblGRCm39 Ensembl
GRCm3810127,321,913 - 127,329,947 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,321,964 - 127,329,943 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710126,760,783 - 126,766,999 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,760,783 - 126,766,999 (+)NCBIMGSCv36mm8
Celera10129,716,377 - 129,722,546 (+)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18799693   PMID:21267068  
PMID:21873635   PMID:30409884  


Genomics

Comparative Map Data
Arhgap9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910127,157,829 - 127,165,816 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl10127,157,833 - 127,165,812 (+)EnsemblGRCm39 Ensembl
GRCm3810127,321,913 - 127,329,947 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10127,321,964 - 127,329,943 (+)EnsemblGRCm38mm10GRCm38
MGSCv3710126,760,783 - 126,766,999 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3610126,760,783 - 126,766,999 (+)NCBIMGSCv36mm8
Celera10129,716,377 - 129,722,546 (+)NCBICelera
Cytogenetic Map10D3NCBI
cM Map1074.5NCBI
ARHGAP9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381257,472,269 - 57,488,824 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1257,472,264 - 57,488,814 (-)EnsemblGRCh38hg38GRCh38
GRCh371257,866,052 - 57,882,607 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361256,152,305 - 56,159,900 (-)NCBINCBI36Build 36hg18NCBI36
Build 341256,152,313 - 56,168,864NCBI
Celera1257,520,025 - 57,527,620 (-)NCBICelera
Cytogenetic Map12q13.3NCBI
HuRef1254,903,912 - 54,911,506 (-)NCBIHuRef
CHM1_11257,834,151 - 57,841,746 (-)NCBICHM1_1
T2T-CHM13v2.01257,440,558 - 57,457,116 (-)NCBIT2T-CHM13v2.0
Arhgap9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8765,034,023 - 65,042,336 (+)NCBIGRCr8
mRatBN7.2763,148,573 - 63,157,025 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl763,148,900 - 63,157,524 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx765,038,168 - 65,046,289 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0767,240,592 - 67,248,713 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0767,041,922 - 67,050,041 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0770,612,650 - 70,620,900 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl770,612,103 - 70,620,890 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0770,786,981 - 70,795,179 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4767,280,267 - 67,288,390 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1767,302,835 - 67,309,117 (+)NCBI
Celera760,289,141 - 60,297,261 (+)NCBICelera
Cytogenetic Map7q22NCBI
Arhgap9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554585,193,816 - 5,199,067 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554585,193,708 - 5,201,625 (-)NCBIChiLan1.0ChiLan1.0
ARHGAP9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21036,855,544 - 36,868,021 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11236,849,019 - 36,864,789 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01231,445,732 - 31,453,763 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11231,701,480 - 31,710,064 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1231,693,309 - 31,710,064 (+)Ensemblpanpan1.1panPan2
ARHGAP9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1101,576,114 - 1,583,611 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha101,639,366 - 1,652,757 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0101,585,166 - 1,598,560 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl101,585,194 - 1,592,651 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1101,563,236 - 1,576,619 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0101,804,725 - 1,818,112 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0101,930,089 - 1,943,488 (-)NCBIUU_Cfam_GSD_1.0
Arhgap9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494557,225,877 - 57,240,459 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366461,630,029 - 1,638,571 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366461,629,814 - 1,637,535 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl522,747,339 - 22,762,049 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1522,747,346 - 22,762,179 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2524,812,589 - 24,835,154 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11153,384,335 - 53,398,445 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1153,384,449 - 53,396,083 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037192,565,217 - 192,582,694 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arhgap9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480210,475,609 - 10,483,043 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480210,461,014 - 10,483,148 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Arhgap9
218 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:147
Count of miRNA genes:132
Interacting mature miRNAs:142
Transcripts:ENSMUST00000069548
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11040593Lmr5e_mleishmaniasis resistance 5e (mouse)1099220635130530862Mouse
11040598Lmr5b_mleishmaniasis resistance 5b (mouse)10105179713130530862Mouse
4142461Bmd25_mbone mineral density 25 (mouse)Not determined1097217101130530862Mouse
11533919Mvb4_mmodifier of vibrator 4 (mouse)397217101130530862Mouse
4141007Obrq10_mobesity resistance QTL 10 (mouse)Not determined103243727130530862Mouse
11041664Lmr25_mleishmaniasis resistance 25 (mouse)10108575094130530862Mouse
11049570Lmr25b_mleishmaniasis resistance 25b (mouse)10108575094130530862Mouse
1357744Cfbw4_mcystic fibrosis body weight 4 (mouse)Not determined10100986516130530862Mouse
1300678Leg2_mlongevity extending gene 2 (mouse)Not determined10102506908130530862Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
11533921Mvb2_mmodifier of vibrator 2 (mouse)1097217101130530862Mouse
11040597Lmr5a_mleishmaniasis resistance 5a (mouse)1099220635130530862Mouse
1302200Sle12_msystematic lupus erythematosus susceptibility 12 (mouse)Not determined10105041304130530862Mouse
11040596Lmr5d_mleishmaniasis resistance 5d (mouse)10105179713130530862Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
1357482Nhdlq4_mnon-HDL QTL 4 (mouse)Not determined10105041304130530862Mouse
1300679Nociq2_mnociceptive sensitivity inflammatory QTL 2 (mouse)Not determined10105041304130530862Mouse
11039496Ltpr5b_mLeishmania tropica response 5b (mouse)10108575094130530862Mouse
4141402T2dm1sa_mtype 2 diabetes mellitus 1 in SMXA RI mice (mouse)Not determined97758644130530862Mouse
12911218Frct3a_mfear conditioning traits 3a (mouse)10122785970129466996Mouse
26884405Huml2_mhumerus length 2, 5 week (mouse)1069735830130430862Mouse
1357544Vtbt10_mvertebral trabecular bone trait 10 (mouse)Not determined1097217101130530862Mouse
4141361Cfmq3_mcystic fibrosis modifier QTL 3 (mouse)Not determined10101497164130530862Mouse
4141487Tgq21_mtriglyceride QTL 21 (mouse)Not determined104110021130530862Mouse
14746996Manh69_mmandible shape 69 (mouse)10104763638130530862Mouse
14696727Kidrq2_mkidney weight, right QTL 2 (mouse)10102902508130530862Mouse
12904001Opfaq10_mopen field activity QTL 10 (mouse)10125633671129466375Mouse
11040595Lmr5c_mleishmaniasis resistance 5c (mouse)1099220635130530862Mouse
12911220Frct3c_mfear conditioning traits 3c (mouse)10122785970129466996Mouse
4142089Obrq9_mobesity resistance QTL 9 (mouse)Not determined108515907130530862Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
11040594Lmr5f_mleishmaniasis resistance 5f (mouse)10105179713130530862Mouse
1301895Exq1_mexploratory and excitability QTL 1 (mouse)Not determined10102847852130530862Mouse
12879490Frct3_mfear conditioning traits 3 (mouse)10122785970129466996Mouse
12880413V125Dq9_mvitamin D active form serum level QTL 9 (mouse)1097535905130530862Mouse
1301968Estq4_mestradiol regulated response QTL 4 (mouse)Not determined10100986516130530862Mouse
1301901Im5_mimmunoregulatory 5 (mouse)Not determined10101497164130530862Mouse
4141153Ltgq2_mliver triglyceride QTL 2 (mouse)Not determined108515907130530862Mouse
11049563Lmr25a_mleishmaniasis resistance 25a (mouse)10108575094130530862Mouse

Markers in Region
AV235269  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810127,330,018 - 127,330,122UniSTSGRCm38
MGSCv3710126,767,074 - 126,767,178UniSTSGRCm37
Celera10129,722,621 - 129,722,725UniSTS
Cytogenetic Map10D3UniSTS
cM Map1069.0UniSTS
Whitehead/MRC_RH101383.03UniSTS
AU043488  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810127,329,552 - 127,329,663UniSTSGRCm38
MGSCv3710126,766,608 - 126,766,719UniSTSGRCm37
Celera10129,722,155 - 129,722,266UniSTS
Cytogenetic Map10D3UniSTS
cM Map1069.0UniSTS
Whitehead/MRC_RH101382.75UniSTS
AF026305  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3810127,329,955 - 127,330,037UniSTSGRCm38
MGSCv3710126,767,011 - 126,767,093UniSTSGRCm37
Celera10129,722,558 - 129,722,640UniSTS
Cytogenetic Map10D3UniSTS
cM Map1069.0UniSTS
Whitehead/MRC_RH101383.31UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001285785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006513571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK049245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY184139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY315862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ498128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000069548   ⟹   ENSMUSP00000066455
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,159,625 - 127,165,812 (+)Ensembl
GRCm38.p6 Ensembl10127,323,756 - 127,329,943 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218656
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,160,192 - 127,165,812 (+)Ensembl
GRCm38.p6 Ensembl10127,324,323 - 127,329,943 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219026   ⟹   ENSMUSP00000151574
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,159,576 - 127,165,812 (+)Ensembl
GRCm38.p6 Ensembl10127,323,707 - 127,329,943 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219511   ⟹   ENSMUSP00000151690
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl10127,157,833 - 127,165,657 (+)Ensembl
GRCm38.p6 Ensembl10127,321,964 - 127,329,788 (+)Ensembl
RefSeq Acc Id: NM_001285785   ⟹   NP_001272714
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,157,833 - 127,165,816 (+)NCBI
GRCm3810127,321,964 - 127,329,947 (+)NCBI
Celera10129,714,577 - 129,722,546 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359656   ⟹   NP_001346585
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,159,576 - 127,165,816 (+)NCBI
GRCm3810127,323,707 - 127,329,947 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359657   ⟹   NP_001346586
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,161,511 - 127,165,816 (+)NCBI
GRCm3810127,325,642 - 127,329,947 (+)NCBI
Sequence:
RefSeq Acc Id: NM_146011   ⟹   NP_666123
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,159,576 - 127,165,816 (+)NCBI
GRCm3810127,323,707 - 127,329,947 (+)NCBI
MGSCv3710126,760,783 - 126,766,999 (+)RGD
Celera10129,714,577 - 129,722,546 (+)NCBI
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006513569   ⟹   XP_006513632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,157,829 - 127,165,815 (+)NCBI
GRCm3810127,321,913 - 127,329,946 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006513571   ⟹   XP_006513634
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3910127,159,572 - 127,165,815 (+)NCBI
GRCm3810127,323,686 - 127,329,946 (+)NCBI
Sequence:
RefSeq Acc Id: NP_666123   ⟸   NM_146011
- Peptide Label: isoform 2
- UniProtKB: Q8QZW8 (UniProtKB/TrEMBL),   Q8C293 (UniProtKB/TrEMBL),   Q3TIR9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001272714   ⟸   NM_001285785
- Peptide Label: isoform 1
- UniProtKB: Q1HDU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006513632   ⟸   XM_006513569
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006513634   ⟸   XM_006513571
- Peptide Label: isoform X2
- UniProtKB: Q78T58 (UniProtKB/TrEMBL),   Q3TIR9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001346585   ⟸   NM_001359656
- Peptide Label: isoform 2
- UniProtKB: Q8C293 (UniProtKB/TrEMBL),   Q8QZW8 (UniProtKB/TrEMBL),   Q3TIR9 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001346586   ⟸   NM_001359657
- Peptide Label: isoform 3
- UniProtKB: Q78T58 (UniProtKB/TrEMBL),   Q3TIR9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000151574   ⟸   ENSMUST00000219026
RefSeq Acc Id: ENSMUSP00000151690   ⟸   ENSMUST00000219511
RefSeq Acc Id: ENSMUSP00000066455   ⟸   ENSMUST00000069548
Protein Domains
PH   Rho-GAP   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q1HDU4-F1-model_v2 AlphaFold Q1HDU4 1-648 view protein structure

Promoters
RGD ID:6819009
Promoter ID:MM_KWN:5889
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Spleen
Transcripts:ENSMUST00000069535
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610126,758,516 - 126,759,016 (+)MPROMDB
RGD ID:6819008
Promoter ID:MM_KWN:5890
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:NM_146011,   UC007HJC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610126,760,146 - 126,760,772 (+)MPROMDB
RGD ID:6846695
Promoter ID:MM_ACW:6331
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:ARHGAP9.KSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv3610126,763,956 - 126,764,456 (+)MPROMDB
RGD ID:8673494
Promoter ID:EPDNEW_M14777
Type:initiation region
Name:Arhgap9_1
Description:Mus musculus Rho GTPase activating protein 9 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3810127,323,727 - 127,323,787EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2143764 AgrOrtholog
Ensembl Genes ENSMUSG00000040345 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000069548 ENTREZGENE
  ENSMUST00000069548.7 UniProtKB/TrEMBL
  ENSMUST00000219026 ENTREZGENE
  ENSMUST00000219026.2 UniProtKB/TrEMBL
  ENSMUST00000219511 ENTREZGENE
  ENSMUST00000219511.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.555.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  SH3 Domains UniProtKB/TrEMBL
InterPro PH_like_dom UniProtKB/TrEMBL
  Pleckstrin_homology UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/TrEMBL
  RhoGAP_dom UniProtKB/TrEMBL
  SH3-like_dom UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
KEGG Report mmu:216445 UniProtKB/TrEMBL
MGD MGI:2143764 ENTREZGENE
NCBI Gene 216445 ENTREZGENE
PANTHER RHO GTPASE-ACTIVATING PROTEIN 9 UniProtKB/TrEMBL
  RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN UniProtKB/TrEMBL
Pfam PF00169 UniProtKB/TrEMBL
  RhoGAP UniProtKB/TrEMBL
  SH3_1 UniProtKB/TrEMBL
PhenoGen Arhgap9 PhenoGen
PROSITE PH_DOMAIN UniProtKB/TrEMBL
  RHOGAP UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
SMART RhoGAP UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  Rho_GAP UniProtKB/TrEMBL
  SH3 UniProtKB/TrEMBL
UniProt Q1HDU4 ENTREZGENE, UniProtKB/TrEMBL
  Q3TIR9 ENTREZGENE, UniProtKB/TrEMBL
  Q78T58 ENTREZGENE, UniProtKB/TrEMBL
  Q8BNN9_MOUSE UniProtKB/TrEMBL
  Q8C293 ENTREZGENE
  Q8C8F0_MOUSE UniProtKB/TrEMBL
  Q8QZW8 ENTREZGENE, UniProtKB/TrEMBL
  Q8VDJ7_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q8C293 UniProtKB/TrEMBL