Cebpz (CCAAT/enhancer binding protein zeta) - Rat Genome Database

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Gene: Cebpz (CCAAT/enhancer binding protein zeta) Mus musculus
Analyze
Symbol: Cebpz
Name: CCAAT/enhancer binding protein zeta
RGD ID: 1312756
MGI Page MGI
Description: Predicted to enable transcription coactivator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be part of CCAAT-binding activity factor complex. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; bone; brain; genitourinary system; and hemolymphoid system gland. Orthologous to human CEBPZ (CCAAT enhancer binding protein zeta).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI848081; Cbf; CBF2; CCAAT-binding factor; CCAAT-box-binding transcription factor; CCAAT/enhancer binding protein alpha (C/EBP) related sequence 1; CCAAT/enhancer-binding protein zeta; Cebpa; Cebpa-rs1; MGC36087
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391779,226,432 - 79,244,499 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1779,226,435 - 79,244,495 (-)EnsemblGRCm39 Ensembl
GRCm381778,919,003 - 78,937,070 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1778,919,006 - 78,937,066 (-)EnsemblGRCm38mm10GRCm38
MGSCv371779,318,343 - 79,336,410 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361778,824,297 - 78,842,125 (-)NCBIMGSCv36mm8
Celera1783,237,268 - 83,257,640 (-)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1749.65NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8604343   PMID:8703044   PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:14611647   PMID:16141072   PMID:16141073  
PMID:18287559   PMID:20059953   PMID:21267068   PMID:21873635   PMID:22922362   PMID:24457600   PMID:26167872   PMID:28378742   PMID:32325033   PMID:32554809   PMID:36114006  


Genomics

Comparative Map Data
Cebpz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391779,226,432 - 79,244,499 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1779,226,435 - 79,244,495 (-)EnsemblGRCm39 Ensembl
GRCm381778,919,003 - 78,937,070 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1778,919,006 - 78,937,066 (-)EnsemblGRCm38mm10GRCm38
MGSCv371779,318,343 - 79,336,410 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361778,824,297 - 78,842,125 (-)NCBIMGSCv36mm8
Celera1783,237,268 - 83,257,640 (-)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1749.65NCBI
CEBPZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38237,201,612 - 37,231,596 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl237,201,612 - 37,231,596 (-)EnsemblGRCh38hg38GRCh38
GRCh37237,428,755 - 37,458,739 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36237,282,276 - 37,312,244 (-)NCBINCBI36Build 36hg18NCBI36
Build 34237,340,427 - 37,370,391NCBI
Celera237,269,769 - 37,299,695 (-)NCBICelera
Cytogenetic Map2p22.2NCBI
HuRef237,168,718 - 37,198,634 (-)NCBIHuRef
CHM1_1237,358,225 - 37,388,174 (-)NCBICHM1_1
T2T-CHM13v2.0237,208,702 - 37,238,637 (-)NCBIT2T-CHM13v2.0
Cebpz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8621,872,071 - 21,889,755 (+)NCBIGRCr8
mRatBN7.2616,119,871 - 16,137,600 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl616,119,872 - 16,137,600 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx616,435,347 - 16,452,948 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0616,757,557 - 16,775,158 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0616,237,982 - 16,255,559 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.061,516,804 - 1,534,488 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl61,516,804 - 1,534,488 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.061,506,913 - 1,524,597 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.461,698,162 - 1,715,846 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.161,699,016 - 1,715,835 (-)NCBI
Celera615,784,628 - 15,802,293 (+)NCBICelera
Cytogenetic Map6q12NCBI
Cebpz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554415,013,144 - 5,033,830 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554415,013,144 - 5,033,830 (-)NCBIChiLan1.0ChiLan1.0
CEBPZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21289,248,010 - 89,276,867 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A89,251,994 - 89,280,843 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A37,230,245 - 37,259,113 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A37,995,123 - 38,023,965 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A37,995,123 - 38,023,965 (-)Ensemblpanpan1.1panPan2
CEBPZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11729,565,712 - 29,584,789 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1729,565,722 - 29,584,874 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1729,379,352 - 29,398,593 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01730,215,309 - 30,234,551 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1730,215,214 - 30,234,495 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11729,442,642 - 29,461,854 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01729,505,770 - 29,525,454 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01729,723,995 - 29,743,236 (-)NCBIUU_Cfam_GSD_1.0
Cebpz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629242,396,743 - 42,416,376 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366631,061,472 - 1,086,020 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366631,062,248 - 1,081,598 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CEBPZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3102,964,240 - 102,989,243 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13102,964,213 - 102,988,664 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23109,397,935 - 109,422,194 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CEBPZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11470,161,111 - 70,189,757 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1470,161,155 - 70,190,506 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604541,759,168 - 41,786,928 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cebpz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473818,819,428 - 18,836,468 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473818,819,238 - 18,836,517 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cebpz
818 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:260
Count of miRNA genes:196
Interacting mature miRNAs:227
Transcripts:ENSMUST00000024885
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
26884428Cvht3_mcranial vault height 3, 5 week (mouse)174651092682407429Mouse
1357754Ahl3_mage related hearing loss 3 (mouse)Not determined175020395784204103Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175175842585758612Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175175842585758612Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142201Obrq15_mobesity resistance QTL 15 (mouse)Not determined5753444780885776Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
13464254Ifvrq3_minfluenza virus resistance QTL 3 (mouse)176795765583908089Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse

Markers in Region
C78353  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381778,920,009 - 78,920,129UniSTSGRCm38
MGSCv371779,319,349 - 79,319,469UniSTSGRCm37
Celera1783,238,274 - 83,238,394UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map17B3UniSTS
Whitehead/MRC_RH17935.08UniSTS
RH126355  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381778,919,823 - 78,920,169UniSTSGRCm38
GRCm38931,160,377 - 31,160,586UniSTSGRCm38
MGSCv37930,967,962 - 30,968,171UniSTSGRCm37
MGSCv371779,319,163 - 79,319,509UniSTSGRCm37
Celera1783,238,088 - 83,238,434UniSTS
Celera928,419,694 - 28,419,903UniSTS
Cytogenetic Map17B3UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map9A2-BUniSTS
Whitehead/MRC_RH9315.73UniSTS
AI848081  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381778,919,217 - 78,919,317UniSTSGRCm38
MGSCv371779,318,557 - 79,318,657UniSTSGRCm37
Celera1783,237,482 - 83,237,582UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map17B3UniSTS
Whitehead/MRC_RH17933.07UniSTS
Cebpa-rs1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381850,208,875 - 50,209,011UniSTSGRCm38
GRCm381778,919,881 - 78,920,017UniSTSGRCm38
MGSCv371850,368,529 - 50,368,665UniSTSGRCm37
MGSCv371779,319,221 - 79,319,357UniSTSGRCm37
Celera1851,541,567 - 51,541,703UniSTS
Celera1783,238,146 - 83,238,282UniSTS
Cytogenetic Map17B3UniSTS
Cytogenetic Map17E3UniSTS
cM Map17 UniSTS
Cebpa-rs1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381850,208,875 - 50,209,056UniSTSGRCm38
GRCm381778,919,881 - 78,920,593UniSTSGRCm38
MGSCv371779,319,221 - 79,319,933UniSTSGRCm37
MGSCv371850,368,529 - 50,368,710UniSTSGRCm37
Celera1851,541,567 - 51,541,748UniSTS
Celera1783,238,146 - 83,238,862UniSTS
Cytogenetic Map17B3UniSTS
Cytogenetic Map17E3UniSTS
cM Map17 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001024806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006523558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI848081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW106749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB704756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY077658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA575354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U19891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U19892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000024885   ⟹   ENSMUSP00000024885
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,226,435 - 79,244,495 (-)Ensembl
GRCm38.p6 Ensembl1778,919,006 - 78,937,066 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232899
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,242,646 - 79,244,466 (-)Ensembl
GRCm38.p6 Ensembl1778,935,217 - 78,937,037 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233371
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,229,608 - 79,230,270 (-)Ensembl
GRCm38.p6 Ensembl1778,922,179 - 78,922,841 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233484   ⟹   ENSMUSP00000156479
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,227,274 - 79,244,470 (-)Ensembl
GRCm38.p6 Ensembl1778,919,845 - 78,937,041 (-)Ensembl
RefSeq Acc Id: ENSMUST00000233595
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1779,231,559 - 79,233,413 (-)Ensembl
GRCm38.p6 Ensembl1778,924,130 - 78,925,984 (-)Ensembl
RefSeq Acc Id: NM_001024806   ⟹   NP_001019977
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,226,432 - 79,244,499 (-)NCBI
GRCm381778,919,003 - 78,937,070 (-)ENTREZGENE
MGSCv371779,318,343 - 79,336,410 (-)RGD
Celera1783,237,268 - 83,257,640 (-)RGD
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006523558   ⟹   XP_006523621
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391779,226,468 - 79,244,473 (-)NCBI
GRCm381778,919,006 - 78,937,070 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_001019977   ⟸   NM_001024806
- UniProtKB: Q3UWQ7 (UniProtKB/Swiss-Prot),   Q3TYA8 (UniProtKB/Swiss-Prot),   Q3TXW5 (UniProtKB/Swiss-Prot),   P53569 (UniProtKB/Swiss-Prot),   A0A0R4J046 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006523621   ⟸   XM_006523558
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000156479   ⟸   ENSMUST00000233484
RefSeq Acc Id: ENSMUSP00000024885   ⟸   ENSMUST00000024885
Protein Domains
CCAAT-binding factor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P53569-F1-model_v2 AlphaFold P53569 1-1052 view protein structure

Promoters
RGD ID:13676808
Promoter ID:EPDNEW_M22553
Type:single initiation site
Name:Cebpz_2
Description:Mus musculus CCAAT/enhancer binding protein zeta , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22554  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381778,935,327 - 78,935,387EPDNEW
RGD ID:13676810
Promoter ID:EPDNEW_M22554
Type:initiation region
Name:Cebpz_1
Description:Mus musculus CCAAT/enhancer binding protein zeta , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M22553  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381778,937,050 - 78,937,110EPDNEW
RGD ID:6827930
Promoter ID:MM_KWN:24241
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001024806,   NM_028611,   UC008DPL.1,   UC008DPM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361779,336,151 - 79,336,651 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109386 AgrOrtholog
Ensembl Genes ENSMUSG00000024081 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000024885 ENTREZGENE
  ENSMUST00000024885.10 UniProtKB/TrEMBL
  ENSMUST00000233484.2 UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CCAAT-binding_factor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CEBPZ/Mak21-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12607 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:109386 ENTREZGENE
NCBI Gene 12607 ENTREZGENE
PANTHER CCAAT/ENHANCER-BINDING PROTEIN ZETA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12048 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CBF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cebpz PhenoGen
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J046 ENTREZGENE, UniProtKB/TrEMBL
  A0A3B2WCE8_MOUSE UniProtKB/TrEMBL
  CEBPZ_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TXW5 ENTREZGENE
  Q3TYA8 ENTREZGENE
  Q3UGK4_MOUSE UniProtKB/TrEMBL
  Q3UUZ3_MOUSE UniProtKB/TrEMBL
  Q3UWQ7 ENTREZGENE
UniProt Secondary Q3TXW5 UniProtKB/Swiss-Prot
  Q3TYA8 UniProtKB/Swiss-Prot
  Q3UWQ7 UniProtKB/Swiss-Prot