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Gene: LSM1 (LSM1 homolog, mRNA degradation associated) Homo sapiens
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Symbol: LSM1
Name: LSM1 homolog, mRNA degradation associated
Description: Exhibits RNA binding activity. Involved in histone mRNA catabolic process. Localizes to the cytoplasm and nucleus.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: cancer-associated Sm-like; CASM; LSM1 homolog, U6 small nuclear RNA associated; LSM1 mRNA degradation associated; LSM1, U6 small nuclear RNA associated; LSM1-like protein U6 small nuclear RNA associated; small nuclear ribonuclear CaSm; U6 snRNA-associated Sm-like protein LSm1; YJL124C
Orthologs:
Mus musculus (house mouse) : Lsm1 (LSM1 homolog, mRNA degradation associated)  MGI  Alliance
Rattus norvegicus (Norway rat) : Lsm1 (LSM1 homolog, mRNA degradation associated)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lsm1 (LSM1 homolog, mRNA degradation associated)
Pan paniscus (bonobo/pygmy chimpanzee) : LSM1 (LSM1 homolog, mRNA degradation associated)
Canis lupus familiaris (dog) : LSM1 (LSM1 homolog, mRNA degradation associated)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lsm1 (LSM1 homolog, mRNA degradation associated)
Sus scrofa (pig) : LSM1 (LSM1 homolog, mRNA degradation associated)
Chlorocebus sabaeus (green monkey) : LSM1 (LSM1 homolog, mRNA degradation associated)
Heterocephalus glaber (naked mole-rat) : Lsm1 (LSM1 homolog, mRNA degradation associated)
more info ...
Related Pseudogenes: LSM1P1   LSM1P2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl838,163,335 - 38,176,730 (-)Ensembl
GRCh38838,163,321 - 38,176,730 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37838,020,839 - 38,034,248 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36838,140,014 - 38,153,183 (-)NCBINCBI36hg18NCBI36
Build 34838,140,013 - 38,153,183NCBI
Celera836,973,393 - 36,986,562 (-)NCBI
Cytogenetic Map8p11.23NCBI
HuRef836,555,756 - 36,568,636 (-)NCBIHuRef
CHM1_1838,222,844 - 38,236,249 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on LSM1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1312715
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.