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Gene: OPTC (opticin) Homo sapiens
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Symbol: OPTC
Name: opticin
RGD ID: 1312631
Description: Predicted to have extracellular matrix structural constituent. Predicted to be involved in collagen fibril organization and negative regulation of angiogenesis. Localizes to extracellular matrix.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: oculoglycan; OPT
Orthologs:
Mus musculus (house mouse) : Optc (opticin)  MGI  Alliance
Rattus norvegicus (Norway rat) : Optc (opticin)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Optc (opticin)
Pan paniscus (bonobo/pygmy chimpanzee) : OPTC (opticin)
Canis lupus familiaris (dog) : OPTC (opticin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Optc (opticin)
Sus scrofa (pig) : OPTC (opticin)
Chlorocebus sabaeus (African green monkey) : OPTC (opticin)
Heterocephalus glaber (naked mole-rat) : Optc (opticin)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1203,494,153 - 203,508,949 (+)EnsemblGRCh38hg38GRCh38
GRCh381203,494,153 - 203,508,949 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371203,463,271 - 203,478,077 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361201,729,894 - 201,744,700 (+)NCBINCBI36hg18NCBI36
Build 341200,194,927 - 200,209,734NCBI
Celera1176,592,905 - 176,608,331 (+)NCBI
Cytogenetic Map1q32.1NCBI
HuRef1174,628,320 - 174,643,467 (+)NCBIHuRef
CHM1_11204,886,108 - 204,900,814 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on OPTC
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1312631
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-09-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.