Capn7 (calpain 7) - Rat Genome Database

Name: Capn7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Capn7 (calpain 7) Mus musculus

Analyze

Symbol:

Capn7

Name:

calpain 7

RGD ID:

1312533

MGI Page

MGI

Description:

Predicted to enable MIT domain binding activity and cysteine-type endopeptidase activity. Involved in proteolysis. Predicted to be located in centrosome and cytosol. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and immune system. Orthologous to human CAPN7 (calpain 7).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AU022319; calpain-7; Pa; palB homolog; PalBH

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CAPN7 (calpain 7)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Capn7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Capn7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CAPN7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CAPN7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Capn7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CAPN7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CAPN7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Capn7 (calpain 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Capn7 (calpain 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CAPN7 (calpain 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	capn7 (calpain 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Saccharomyces cerevisiae (baker's yeast):	RIM13	Alliance	DIOPT (Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	clp-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	capn7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	31,058,582 - 31,093,944 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	31,058,595 - 31,093,943 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	31,336,622 - 31,371,987 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	31,336,638 - 31,371,986 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	32,149,910 - 32,185,170 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	30,165,733 - 30,200,993 (+)	NCBI		MGSCv36	mm8
Celera	14	27,595,408 - 27,630,668 (+)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	19.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

3p deletion syndrome (ISO)

genetic disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (EXP)

1,2-dimethylhydrazine (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,6-tribromophenol (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

6-propyl-2-thiouracil (ISO)

aloxistatin (ISO)

amitrole (ISO)

antirheumatic drug (ISO)

benzo[a]pyrene (EXP)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

calcitriol (ISO)

CGP 52608 (ISO)

chlorpyrifos (EXP)

clofibrate (EXP)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

elemental selenium (ISO)

ethyl methanesulfonate (ISO)

folic acid (EXP)

formaldehyde (ISO)

gentamycin (ISO)

inulin (EXP)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (EXP)

perfluorooctane-1-sulfonic acid (EXP)

phenobarbital (EXP)

pirinixic acid (ISO)

piroxicam (ISO)

propiconazole (EXP,ISO)

rimonabant (EXP)

selenium atom (ISO)

silicon dioxide (EXP)

succimer (EXP)

sulfadimethoxine (ISO)

sunitinib (ISO)

tert-butyl hydroperoxide (ISO)

triadimefon (EXP)

triptonide (EXP)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of epithelial cell migration (ISO)

proteolysis (IBA,IMP)

self proteolysis (ISO)

Cellular Component

centrosome (ISO)

cytosol (ISO)

nucleus (IEA)

Molecular Function

calcium-dependent cysteine-type endopeptidase activity (IEA)

cysteine-type endopeptidase activity (IBA)

cysteine-type peptidase activity (IEA)

endopeptidase activity (ISO)

hydrolase activity (IEA)

MIT domain binding (ISO)

peptidase activity (IEA)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased body weight (IEA)

increased thermal nociceptive threshold (IEA)

preweaning lethality, incomplete penetrance (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.	Ko MS, etal., Development 2000 Apr;127(8):1737-49.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	MGD IEA	MGD IEA
4.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:10051333	PMID:10349636	PMID:10559499	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:11342116	PMID:12466851	PMID:12477932	PMID:14610273
PMID:14981075	PMID:15782199	PMID:16141072	PMID:16141073	PMID:18799693	PMID:20436479	PMID:21873635	PMID:26073538	PMID:29459744	PMID:32325033

Genomics

Comparative Map Data

Capn7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	31,058,582 - 31,093,944 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	31,058,595 - 31,093,943 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	31,336,622 - 31,371,987 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	31,336,638 - 31,371,986 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	32,149,910 - 32,185,170 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	30,165,733 - 30,200,993 (+)	NCBI		MGSCv36	mm8
Celera	14	27,595,408 - 27,630,668 (+)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	19.1	NCBI

CAPN7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	15,206,246 - 15,252,916 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	15,206,152 - 15,252,916 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	15,247,753 - 15,294,423 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	15,222,737 - 15,269,427 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	15,222,736 - 15,269,426	NCBI
Celera	3	15,185,995 - 15,232,682 (+)	NCBI		Celera
Cytogenetic Map	3	p25.1	NCBI
HuRef	3	15,183,168 - 15,229,881 (+)	NCBI		HuRef
CHM1_1	3	15,198,625 - 15,245,309 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	15,208,655 - 15,255,322 (+)	NCBI		T2T-CHM13v2.0

Capn7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	6,552,048 - 6,588,317 (+)	NCBI		GRCr8
mRatBN7.2	16	6,545,630 - 6,581,908 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	6,545,731 - 6,581,905 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	6,557,942 - 6,594,211 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	7,702,838 - 7,739,107 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	6,564,944 - 6,601,116 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	7,435,541 - 7,472,483 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	7,435,634 - 7,471,807 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	7,371,439 - 7,407,437 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	6,784,270 - 6,820,953 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	6,784,261 - 6,820,261 (+)	NCBI
Celera	16	8,607,596 - 8,643,420 (-)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

Capn7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	2,269,274 - 2,308,713 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	2,269,274 - 2,307,801 (-)	NCBI	ChiLan1.0	ChiLan1.0

CAPN7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	15,190,903 - 15,236,985 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	15,195,685 - 15,241,747 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	15,131,774 - 15,177,836 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	15,468,890 - 15,515,528 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	15,468,890 - 15,515,528 (+)	Ensembl	panpan1.1		panPan2

CAPN7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	27,336,079 - 27,377,584 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	27,336,843 - 27,378,606 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	27,310,053 - 27,351,668 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	27,847,982 - 27,889,616 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	23	27,537,384 - 27,578,829 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	27,599,118 - 27,640,471 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	27,848,446 - 27,890,014 (-)	NCBI		UU_Cfam_GSD_1.0

Capn7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	169,974,375 - 170,011,926 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	3,112,951 - 3,150,640 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	3,112,951 - 3,152,963 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CAPN7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	2,452,215 - 2,504,581 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	2,452,385 - 2,503,575 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	2,379,271 - 2,430,518 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CAPN7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	60,050,488 - 60,096,369 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	60,050,606 - 60,095,330 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	33,080,043 - 33,126,578 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Capn7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624822	4,896,055 - 4,947,514 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Capn7
843 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1752
Count of miRNA genes:	488
Interacting mature miRNAs:	579
Transcripts:	ENSMUST00000022451, ENSMUST00000143472, ENSMUST00000152182
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301991	Wta3_m	weight adult 3 (mouse)			Not determined		14	3887473	37887650	Mouse
4141550	Dbm3_m	diabetes modifier 3 (mouse)			Not determined			5143473	39143596	Mouse
4141864	Mrdq4_m	modifier of retinal degeneration QTL 4 (mouse)			Not determined			9923245	48765082	Mouse
1300779	Dyscalc4_m	dystrophic cardiac calcinosis 4 (mouse)			Not determined		14	12212871	46213007	Mouse
27226748	Femd8_m	femur midshaft diameter 8, 10 week (mouse)					14	13769273	46737457	Mouse
27226752	Femd4_m	femur midshaft diameter 4, 5 week (mouse)					14	13769273	47237457	Mouse
1300544	Hypn_m	hyperinsulinemia (mouse)			Not determined		14	15160616	49160765	Mouse
1301372	Sluc13_m	susceptibility to lung cancer 13 (mouse)			Not determined		14	18827604	52827726	Mouse
1357589	Kdnw2_m	kidney weight 2 (mouse)			Not determined		14	20887473	121269804	Mouse
1357527	Epfpq1_m	epididymal fat percentage QTL 1 (mouse)			Not determined		14	21062450	71885801	Mouse
14746973	Manh76_m	mandible shape 76 (mouse)					14	22287217	56287217	Mouse
4142485	Modor2_m	modifier of ocular retardation 2 (mouse)			Not determined		14	24926248	58179769	Mouse
13506929	Recrq10_m	recombination rate in male meiosis QTL 10 (mouse)					14	27921957	61137449	Mouse
10043886	Cia49_m	collagen induced arthritis QTL 49 (mouse)			Not determined		14	29996994	63997133	Mouse
27226775	Tibl7_m	tibia length 7, 5 week (mouse)					14	30321957	48837457	Mouse
27226744	Metcl6_m	metatarsal-calcaneal length 6, 5 week (mouse)					14	30321957	52937457	Mouse
27226774	Tibl15_m	tibia length 15, 10 week (mouse)					14	30321957	87937436	Mouse
1300909	Ath13_m	atherosclerosis 13 (mouse)			Not determined		14	30335250	64335381	Mouse
1300998	Cia17_m	collagen induced arthritis 17 (mouse)			Not determined		14	30335250	64335381	Mouse

Markers in Region

AU022319

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	14	31,371,737 - 31,371,872	UniSTS	GRCm38
MGSCv37	14	32,184,923 - 32,185,058	UniSTS	GRCm37
Celera	14	27,630,421 - 27,630,556	UniSTS
Cytogenetic Map	14	B	UniSTS
Whitehead/MRC_RH	14	235.77	UniSTS

Capn7

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	14	B	UniSTS
cM Map	14		UniSTS

AU022319

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	14	31,371,638 - 31,371,854	UniSTS	GRCm38
MGSCv37	14	32,184,824 - 32,185,040	UniSTS	GRCm37
Celera	14	27,630,322 - 27,630,538	UniSTS
Cytogenetic Map	14	B	UniSTS
Whitehead/MRC_RH	14	238.09	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001360187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001422190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001422191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001422192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001422193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001422194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001422195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_009796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_185495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_185496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036158430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036158431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB028640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC108416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ012475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK169334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK177773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK211561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK217243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BB855684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC095980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE988205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF462849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY143496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CAAA01207602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000022451 ⟹ ENSMUSP00000022451

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	31,058,595 - 31,093,941 (+)	Ensembl
GRCm38.p6 Ensembl	14	31,336,638 - 31,371,984 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000143472 ⟹ ENSMUSP00000118596

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	31,058,632 - 31,093,943 (+)	Ensembl
GRCm38.p6 Ensembl	14	31,336,675 - 31,371,986 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000152182 ⟹ ENSMUSP00000119214

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	31,058,664 - 31,093,941 (+)	Ensembl
GRCm38.p6 Ensembl	14	31,336,707 - 31,371,984 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000228237

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	31,087,513 - 31,091,970 (+)	Ensembl
GRCm38.p6 Ensembl	14	31,365,556 - 31,370,013 (+)	Ensembl

RefSeq Acc Id:

NM_001360187 ⟹ NP_001347116

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI
GRCm38	14	31,336,638 - 31,371,984 (+)	NCBI

Sequence:

show sequence

GATGGGCGGAGCAAGGACGCGAGGGGTGGGGGCGGCCGCGAGGGCTCCGAGCCCGGGCTGCTCG
GAGCTCGCAGTCCTCCGGGCGGGTCTGAGGTAGTGGGGCTCCGTCATCTCTTCCGCCGCCCTCG
AAAGTAAACTTTGCCACTCCACCCGCGGGGTCCCCAGTTCTCGCCGCAGTGCCTCCGGGCGTCG
GGGTTCCGCGTCAGGGCCTGTCTGCCTCCCCCGGCGTGGGGCCTTGGGCGCCATGGACGCGTCG
GCGCTGGAGCGGGACGCCGTGCAGTTCGCGCGGCTGGCAGTGCAGCGCGACCACGAAGGCCGCT
ACTCTGAGGCGGTGTTTTACTACAAGCTGCCCAAGCTTTAATTTATGCTGAGATGGCAGGATCC
AGCCTAGAAAGGATCCAAGAGAAGATCAATGAGTATCTGGAAAGAGTGCAAGCCCTTCACTCTG
CAGTTCAGTCAAAGAGTACTGATCCTTTGAAATCAAAACACCAGTTGGATCTAGAACGTGCCCA
TTTTCTTGTTACACAAGCTTTCGATGAAGATGAAAAGGGGAATGTGGAAGATGCCATAGAATTA
TATACAGAAGCTGTGGAACTCTGTCTAAAAACCTCTTCTGAAACTGCTGACAAGACTCTGCAAA
ATAAATTGAAACAGTTGGCTCGACAGGCACTAGATAGAGCAGAAGCATTGAGTGAACCTTTGAC
AAAGCCATTTTGCAAACTCAAGTCAGCAAATATGAAAACAAAGACTCCTCCAGTAAGAACACAC
TTTCCTCTAGGACCTAATCCTTTCGTTGAAAAGCCTCAAGCATTTATAAGTCCACAGTCATGTG
ATGCGCAAGGACAGAAGTACACAGCAGAAGAGATAGAAGTGCTCAGGACAACATCAAAAATAAA
TGGTGTAGAATATGTTCCTTTCATGAGTGTTGATCTAAGGGAACGCTTTGCTTATCCAATGCCT
TTTTGTGATAGGTTGGGCAAGCTTCCATTATCACCTAAACAAAAAACTACATTTTCTAAATGGG
TACGACCGGAAGATCTCACCAACAATCCTACAATGATATACACTGTGTCCAGTTTTAGCATAAA
GCAGACAATAGTATCAGATTGTTCCTTTGTGGCATCGTTGGCTATCAGTGCAGCGTATGAGAGA
CGATTCAATAAGAAGTTAATTACCAGCATAATTTACCCCCAGAATAAGGATGGAGAACCAGAGT
ACAATCCCTGTGGAAAGTATATGGTAAAGCTTCACCTCAATGGTGTTCCGAGAAAGGTGATAAT
TGATGACCAGTTACCTGTTGATCACAAAGGAGAATTGCTGTGTTCTTATTCCAACAATAAAAGT
GAATTGTGGGTGTCACTTATAGAGAAAGCATACATGAAAGTTATGGGAGGATATGATTTCCCAG
GATCCAACTCAAATATTGATCTGCATGCACTGACTGGGTGGATACCAGAAAGGATTGCCATGCA
TTCAGATAGCCAGACGTTCAGTAAGGATAACTCATTCAGAATGCTTTATCAAAGATTTCACAAA
GGAGATGTCCTCATCACCGCATCGACGGGAGTAATGACTGAAGCTGAAGGGGAGAAGTGGGGCC
TGGTTCCCACTCATGCCTATGCGGTTTTGGATATTAGAGAGTTCAAGGGGCTGAGATTTATTCA
GTTAAAAAACCCTTGGAGCCATTTACGCTGGAAAGGAAGGTACAGTGAGAATGATGTGAAAAAC
TGGACCCCAGAATTGCAGAAGTATTTAAACTTTGATCCACGAACAGCTCAGAAAATAGATAATG
GAATATTTTGGATTTCCTGGGATGATCTTTGCCAGTATTATGATGTAGTTTATTTGAGTTGGAA
TCCAGCTCTTTTTAAAGAATCAACTTGCATTCACAGTACTTGGGATGCTAAACAAGGACCTGTG
AAAGATGCTTATAGCCTGGCCAACAACCCCCAGTACAAATTGGAGGTGCAGTGTCCACAAGGGG
GTGCTGCAGTTTGGGTTTTGCTTAGTAGACACATAACAGACAAGGATGACTTCGCAAATAACCG
TGAGTTTATCACAATGGTTGTGTACAAGACTGATGGCAAGAAGGTTTACTACCCAGCTGACCCA
CCTCCATACATTGATGGGATTCGAATTAACAGCCCTCATTACTTGACTAAGATAAAGCTGACCA
CGCCCGGGACTCACACCTTCACCCTAGTGGTTTCTCAGTATGAGAAACAGAATACGATTCATTA
CACAGTCCGGGTGTATTCAGCCTGCAGCTTTACTTTTTCGAAGATCCCTTCACCATACACCTTA
TCCAAACGGATAAATGGAAAGTGGAGTGGTCAAAGTGCTGGAGGATGTGGAAATTTTCAGGAGA
CTCACAAAAATAACCCCATCTACCAATTCCATATAGATAAGACTGGACCGTTATTGATTGAGCT
GAGAGGACCAAGGCAATACAGTGTTGGATTTGAGGTTGTAGCAGTTTCCATAATGGGAGATCCT
GGTCCTCATGGCTTTCAGAGGAAATCTAGTGGTGACTATAGGTGTGGATTTTGCTACTTAGAAC
TGGAAAACATACCTGCTGGGATCTTTAATATCATCCCTAGTACTTTTTTGCCTAAACAAGAAGG
ACCTTTTTTCTTGGACTTTAATAGTACTGTCCCCATCAAGACAACACAACTCCAATGATTGAGA
ACTCTCAGCTATTACTGGATTCCATATTTCCCAGTCTCAGCTCTTCAGACAAGGAGACAAATCA
CGATGGTGAACCATCAGAATGGAATTAAATCAAAAGCATGTTACGGAGTCTGGTGCTCGTTGTG
GTGTTTGGTAAGGATTTTAGATAGTGGAATTACCTTAATCACCTGAAATACTGTTTACATGGTT
TGTGCACACAGAGCTGGCGTGTACTCGGTGGCGGCTCTGTGTAAATCACAGGCTAGATTCAGCC
ATCACTGGGAGATGCTTTCGTTAATAGGACACGAGGAGGACAATGAGGACCACAGGTCCACTGA
GTGCAAGAGCAGCCTAGTTTAGGATCTTGAAATACCTATGTTTCCTGTTTTTACAGAGCACGTA
CGTTTAGCCCATTTATGTTGACCCCACCATACATCTTAAACAACTAATTACCAAATGAATTAGG
TCACTGCAACTAATTTGAATTTTTCATTGTGTCTTTAATGTTTATTGTCGTGTAGCTGTTAAGC
TTTAAAAACCGCTGTTTAGCTTAGCATGGAGATGCTCAGGCTTAAGAATGAAGGTTGTCAGTGT
TAGGTGCATTGTCCATTGTAGAGAGGACCGAAGTATATTTACTGTTGCTGTTCTTAGTTCTTAG
CAGGTTGGTGAATGTAGCAATCAGATGGAAATGCTGAGGTTTAACCGTAGGGTTTTAATTGCTC
TGTAGTCAGTGCTTTCATCATGGGGACTTGGGGAGTCCTTGAGAATTTAGTATATGGTGACTGA
GTTATACAGCATTCATAAAAAGTGAGTGGTCAGGAATTAGTGTTTACATAAAATCATCACTGCA
GAATGATGCTCAAGATTTTCAAGTTCTGGAAAATAGGATGGGATCTGTCATTGTCTCTACTTTA
TAATTATCAAATCTATTTCTACTGCCTTTGATTGAAATAAAATATTTATACTTATGGAAAAAAA
AAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001422190 ⟹ NP_001409119

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NM_001422191 ⟹ NP_001409120

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NM_001422192 ⟹ NP_001409121

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NM_001422193 ⟹ NP_001409122

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NM_001422194 ⟹ NP_001409123

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NM_001422195 ⟹ NP_001409124

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NM_009796 ⟹ NP_033926

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI
GRCm38	14	31,336,638 - 31,371,984 (+)	NCBI
MGSCv37	14	32,149,910 - 32,185,170 (+)	RGD
Celera	14	27,595,408 - 27,630,668 (+)	RGD
cM Map	14		ENTREZGENE

Sequence:

show sequence

GATGGGCGGAGCAAGGACGCGAGGGGTGGGGGCGGCCGCGAGGGCTCCGAGCCCGGGCTGCTCG
GAGCTCGCAGTCCTCCGGGCGGGTCTGAGGTAGTGGGGCTCCGTCATCTCTTCCGCCGCCCTCG
AAAGTAAACTTTGCCACTCCACCCGCGGGGTCCCCAGTTCTCGCCGCAGTGCCTCCGGGCGTCG
GGGTTCCGCGTCAGGGCCTGTCTGCCTCCCCCGGCGTGGGGCCTTGGGCGCCATGGACGCGTCG
GCGCTGGAGCGGGACGCCGTGCAGTTCGCGCGGCTGGCAGTGCAGCGCGACCACGAAGGCCGCT
ACTCTGAGGCGGTGTTTTACTACAAGGAAGCTGCCCAAGCTTTAATTTATGCTGAGATGGCAGG
ATCCAGCCTAGAAAGGATCCAAGAGAAGATCAATGAGTATCTGGAAAGAGTGCAAGCCCTTCAC
TCTGCAGTTCAGTCAAAGAGTACTGATCCTTTGAAATCAAAACACCAGTTGGATCTAGAACGTG
CCCATTTTCTTGTTACACAAGCTTTCGATGAAGATGAAAAGGGGAATGTGGAAGATGCCATAGA
ATTATATACAGAAGCTGTGGAACTCTGTCTAAAAACCTCTTCTGAAACTGCTGACAAGACTCTG
CAAAATAAATTGAAACAGTTGGCTCGACAGGCACTAGATAGAGCAGAAGCATTGAGTGAACCTT
TGACAAAGCCATTTTGCAAACTCAAGTCAGCAAATATGAAAACAAAGACTCCTCCAGTAAGAAC
ACACTTTCCTCTAGGACCTAATCCTTTCGTTGAAAAGCCTCAAGCATTTATAAGTCCACAGTCA
TGTGATGCGCAAGGACAGAAGTACACAGCAGAAGAGATAGAAGTGCTCAGGACAACATCAAAAA
TAAATGGTGTAGAATATGTTCCTTTCATGAGTGTTGATCTAAGGGAACGCTTTGCTTATCCAAT
GCCTTTTTGTGATAGGTTGGGCAAGCTTCCATTATCACCTAAACAAAAAACTACATTTTCTAAA
TGGGTACGACCGGAAGATCTCACCAACAATCCTACAATGATATACACTGTGTCCAGTTTTAGCA
TAAAGCAGACAATAGTATCAGATTGTTCCTTTGTGGCATCGTTGGCTATCAGTGCAGCGTATGA
GAGACGATTCAATAAGAAGTTAATTACCAGCATAATTTACCCCCAGAATAAGGATGGAGAACCA
GAGTACAATCCCTGTGGAAAGTATATGGTAAAGCTTCACCTCAATGGTGTTCCGAGAAAGGTGA
TAATTGATGACCAGTTACCTGTTGATCACAAAGGAGAATTGCTGTGTTCTTATTCCAACAATAA
AAGTGAATTGTGGGTGTCACTTATAGAGAAAGCATACATGAAAGTTATGGGAGGATATGATTTC
CCAGGATCCAACTCAAATATTGATCTGCATGCACTGACTGGGTGGATACCAGAAAGGATTGCCA
TGCATTCAGATAGCCAGACGTTCAGTAAGGATAACTCATTCAGAATGCTTTATCAAAGATTTCA
CAAAGGAGATGTCCTCATCACCGCATCGACGGGAGTAATGACTGAAGCTGAAGGGGAGAAGTGG
GGCCTGGTTCCCACTCATGCCTATGCGGTTTTGGATATTAGAGAGTTCAAGGGGCTGAGATTTA
TTCAGTTAAAAAACCCTTGGAGCCATTTACGCTGGAAAGGAAGGTACAGTGAGAATGATGTGAA
AAACTGGACCCCAGAATTGCAGAAGTATTTAAACTTTGATCCACGAACAGCTCAGAAAATAGAT
AATGGAATATTTTGGATTTCCTGGGATGATCTTTGCCAGTATTATGATGTAGTTTATTTGAGTT
GGAATCCAGCTCTTTTTAAAGAATCAACTTGCATTCACAGTACTTGGGATGCTAAACAAGGACC
TGTGAAAGATGCTTATAGCCTGGCCAACAACCCCCAGTACAAATTGGAGGTGCAGTGTCCACAA
GGGGGTGCTGCAGTTTGGGTTTTGCTTAGTAGACACATAACAGACAAGGATGACTTCGCAAATA
ACCGTGAGTTTATCACAATGGTTGTGTACAAGACTGATGGCAAGAAGGTTTACTACCCAGCTGA
CCCACCTCCATACATTGATGGGATTCGAATTAACAGCCCTCATTACTTGACTAAGATAAAGCTG
ACCACGCCCGGGACTCACACCTTCACCCTAGTGGTTTCTCAGTATGAGAAACAGAATACGATTC
ATTACACAGTCCGGGTGTATTCAGCCTGCAGCTTTACTTTTTCGAAGATCCCTTCACCATACAC
CTTATCCAAACGGATAAATGGAAAGTGGAGTGGTCAAAGTGCTGGAGGATGTGGAAATTTTCAG
GAGACTCACAAAAATAACCCCATCTACCAATTCCATATAGATAAGACTGGACCGTTATTGATTG
AGCTGAGAGGACCAAGGCAATACAGTGTTGGATTTGAGGTTGTAGCAGTTTCCATAATGGGAGA
TCCTGGTCCTCATGGCTTTCAGAGGAAATCTAGTGGTGACTATAGGTGTGGATTTTGCTACTTA
GAACTGGAAAACATACCTGCTGGGATCTTTAATATCATCCCTAGTACTTTTTTGCCTAAACAAG
AAGGACCTTTTTTCTTGGACTTTAATAGTACTGTCCCCATCAAGACAACACAACTCCAATGATT
GAGAACTCTCAGCTATTACTGGATTCCATATTTCCCAGTCTCAGCTCTTCAGACAAGGAGACAA
ATCACGATGGTGAACCATCAGAATGGAATTAAATCAAAAGCATGTTACGGAGTCTGGTGCTCGT
TGTGGTGTTTGGTAAGGATTTTAGATAGTGGAATTACCTTAATCACCTGAAATACTGTTTACAT
GGTTTGTGCACACAGAGCTGGCGTGTACTCGGTGGCGGCTCTGTGTAAATCACAGGCTAGATTC
AGCCATCACTGGGAGATGCTTTCGTTAATAGGACACGAGGAGGACAATGAGGACCACAGGTCCA
CTGAGTGCAAGAGCAGCCTAGTTTAGGATCTTGAAATACCTATGTTTCCTGTTTTTACAGAGCA
CGTACGTTTAGCCCATTTATGTTGACCCCACCATACATCTTAAACAACTAATTACCAAATGAAT
TAGGTCACTGCAACTAATTTGAATTTTTCATTGTGTCTTTAATGTTTATTGTCGTGTAGCTGTT
AAGCTTTAAAAACCGCTGTTTAGCTTAGCATGGAGATGCTCAGGCTTAAGAATGAAGGTTGTCA
GTGTTAGGTGCATTGTCCATTGTAGAGAGGACCGAAGTATATTTACTGTTGCTGTTCTTAGTTC
TTAGCAGGTTGGTGAATGTAGCAATCAGATGGAAATGCTGAGGTTTAACCGTAGGGTTTTAATT
GCTCTGTAGTCAGTGCTTTCATCATGGGGACTTGGGGAGTCCTTGAGAATTTAGTATATGGTGA
CTGAGTTATACAGCATTCATAAAAAGTGAGTGGTCAGGAATTAGTGTTTACATAAAATCATCAC
TGCAGAATGATGCTCAAGATTTTCAAGTTCTGGAAAATAGGATGGGATCTGTCATTGTCTCTAC
TTTATAATTATCAAATCTATTTCTACTGCCTTTGATTGAAATAAAATATTTATACTTATGGAAA
AAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NR_185495

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

NR_185496

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,632 - 31,093,941 (+)	NCBI

RefSeq Acc Id:

XM_036158430 ⟹ XP_036014323

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,598 - 31,093,944 (+)	NCBI

Sequence:

show sequence

GGGCGGAGCAAGGACGCGAGGGGTGGGGGCGGCCGCGAGGGCTCCGAGCCCGGGCTGCTCGGAG
CTCGCAGTCCTCCGGGCGGGTCTGAGGTAGTGGGGCTCCGTCATCTCTTCCGCCGCCCTCGAAA
GTAAACTTTGCCACTCCACCCGCGGGGTCCCCAGTTCTCGCCGCAGTGCCTCCGGGCGTCGGGG
TTCCGCGTCAGGGCCTGTCTGCCTCCCCCGGCGTGGGGCCTTGGGCGCCATGGACGCGTCGGCG
CTGGAGCGGGACGCCGTGCAGTTCGCGCGGCTGGCAGTGCAGCGCGACCACGAAGGCCGCTACT
CTGAGGCGGTGTTTTACTACAAGCTGCCCAAGCTTTAATTTATGCTGAGATGGCAGGATCCAGC
CTAGAAAGGATCCAAGAGAAGATCAATGAGTATCTGGAAAGAGTGCAAGCCCTTCACTCTGCAG
TTCAGTCAAAGAGTACTGATCCTTTGAAATCAAAACACCAGTTGGATCTAGAACGTGCCCATTT
TCTTGTTACACAAGCTTTCGATGAAGATGAAAAGGGGAATGTGGAAGATGCCATAGAATTATAT
ACAGAAGCTGTGGAACTCTGTCTAAAAACCGTAGTCTTCTGAAACTGCTGACAAGACTCTGCAA
AATAAATTGAAACAGTTGGCTCGACAGGCACTAGATAGAGCAGAAGCATTGAGTGAACCTTTGA
CAAAGCCATTTTGCAAACTCAAGTCAGCAAATATGAAAACAAAGACTCCTCCAGTAAGAACACA
CTTTCCTCTAGGACCTAATCCTTTCGTTGAAAAGCCTCAAGCATTTATAAGTCCACAGTCATGT
GATGCGCAAGGACAGAAGTACACAGCAGAAGAGATAGAAGTGCTCAGGACAACATCAAAAATAA
ATGGTGTAGAATATGTTCCTTTCATGAGTGTTGATCTAAGGGAACGCTTTGCTTATCCAATGCC
TTTTTGTGATAGGTTGGGCAAGCTTCCATTATCACCTAAACAAAAAACTACATTTTCTAAATGG
GTACGACCGGAAGATCTCACCAACAATCCTACAATGATATACACTGTGTCCAGTTTTAGCATAA
AGCAGACAATAGTATCAGATTGTTCCTTTGTGGCATCGTTGGCTATCAGTGCAGCGTATGAGAG
ACGATTCAATAAGAAGTTAATTACCAGCATAATTTACCCCCAGAATAAGGATGGAGAACCAGAG
TACAATCCCTGTGGAAAGTATATGGTAAAGCTTCACCTCAATGGTGTTCCGAGAAAGGTGATAA
TTGATGACCAGTTACCTGTTGATCACAAAGGAGAATTGCTGTGTTCTTATTCCAACAATAAAAG
TGAATTGTGGGTGTCACTTATAGAGAAAGCATACATGAAAGTTATGGGAGGATATGATTTCCCA
GGATCCAACTCAAATATTGATCTGCATGCACTGACTGGGTGGATACCAGAAAGGATTGCCATGC
ATTCAGATAGCCAGACGTTCAGTAAGGATAACTCATTCAGAATGCTTTATCAAAGATTTCACAA
AGGAGATGTCCTCATCACCGCATCGACGGGAGTAATGACTGAAGCTGAAGGGGAGAAGTGGGGC
CTGGTTCCCACTCATGCCTATGCGGTTTTGGATATTAGAGAGTTCAAGGGGCTGAGATTTATTC
AGTTAAAAAACCCTTGGAGCCATTTACGCTGGAAAGGAAGGTACAGTGAGAATGATGTGAAAAA
CTGGACCCCAGAATTGCAGAAGTATTTAAACTTTGATCCACGAACAGCTCAGAAAATAGATAAT
GGAATATTTTGGATTTCCTGGGATGATCTTTGCCAGTATTATGATGTAGTTTATTTGAGTTGGA
ATCCAGCTCTTTTTAAAGAATCAACTTGCATTCACAGTACTTGGGATGCTAAACAAGGACCTGT
GAAAGATGCTTATAGCCTGGCCAACAACCCCCAGTACAAATTGGAGGTGCAGTGTCCACAAGGG
GGTGCTGCAGTTTGGGTTTTGCTTAGTAGACACATAACAGACAAGGATGACTTCGCAAATAACC
GTGAGTTTATCACAATGGTTGTGTACAAGACTGATGGCAAGAAGGTTTACTACCCAGCTGACCC
ACCTCCATACATTGATGGGATTCGAATTAACAGCCCTCATTACTTGACTAAGATAAAGCTGACC
ACGCCCGGGACTCACACCTTCACCCTAGTGGTTTCTCAGTATGAGAAACAGAATACGATTCATT
ACACAGTCCGGGTGTATTCAGCCTGCAGCTTTACTTTTTCGAAGATCCCTTCACCATACACCTT
ATCCAAACGGATAAATGGAAAGTGGAGTGGTCAAAGTGCTGGAGGATGTGGAAATTTTCAGGAG
ACTCACAAAAATAACCCCATCTACCAATTCCATATAGATAAGACTGGACCGTTATTGATTGAGC
TGAGAGGACCAAGGCAATACAGTGTTGGATTTGAGGTTGTAGCAGTTTCCATAATGGGAGATCC
TGGTCCTCATGGCTTTCAGAGGAAATCTAGTGGTGACTATAGGTGTGGATTTTGCTACTTAGAA
CTGGAAAACATACCTGCTGGGATCTTTAATATCATCCCTAGTACTTTTTTGCCTAAACAAGAAG
GACCTTTTTTCTTGGACTTTAATAGTACTGTCCCCATCAAGACAACACAACTCCAATGATTGAG
AACTCTCAGCTATTACTGGATTCCATATTTCCCAGTCTCAGCTCTTCAGACAAGGAGACAAATC
ACGATGGTGAACCATCAGAATGGAATTAAATCAAAAGCATGTTACGGAGTCTGGTGCTCGTTGT
GGTGTTTGGTAAGGATTTTAGATAGTGGAATTACCTTAATCACCTGAAATACTGTTTACATGGT
TTGTGCACACAGAGCTGGCGTGTACTCGGTGGCGGCTCTGTGTAAATCACAGGCTAGATTCAGC
CATCACTGGGAGATGCTTTCGTTAATAGGACACGAGGAGGACAATGAGGACCACAGGTCCACTG
AGTGCAAGAGCAGCCTAGTTTAGGATCTTGAAATACCTATGTTTCCTGTTTTTACAGAGCACGT
ACGTTTAGCCCATTTATGTTGACCCCACCATACATCTTAAACAACTAATTACCAAATGAATTAG
GTCACTGCAACTAATTTGAATTTTTCATTGTGTCTTTAATGTTTATTGTCGTGTAGCTGTTAAG
CTTTAAAAACCGCTGTTTAGCTTAGCATGGAGATGCTCAGGCTTAAGAATGAAGGTTGTCAGTG
TTAGGTGCATTGTCCATTGTAGAGAGGACCGAAGTATATTTACTGTTGCTGTTCTTAGTTCTTA
GCAGGTTGGTGAATGTAGCAATCAGATGGAAATGCTGAGGTTTAACCGTAGGGTTTTAATTGCT
CTGTAGTCAGTGCTTTCATCATGGGGACTTGGGGAGTCCTTGAGAATTTAGTATATGGTGACTG
AGTTATACAGCATTCATAAAAAGTGAGTGGTCAGGAATTAGTGTTTACATAAAATCATCACTGC
AGAATGATGCTCAAGATTTTCAAGTTCTGGAAAATAGGATGGGATCTGTCATTGTCTCTACTTT
ATAATTATCAAATCTATTTCTACTGCCTTTGATTGAAATAAAATATTTATACTTATGGAAACTA

hide sequence

RefSeq Acc Id:

XM_036158431 ⟹ XP_036014324

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	31,058,582 - 31,093,944 (+)	NCBI

Sequence:

show sequence

GCGCAATGCGGCTGATGGGCGGAGCAAGGACGCGAGGGGTGGGGGCGGCCGCGAGGGCTCCGAG
CCCGGGCTGCTCGGAGCTCGCAGTCCTCCGGGCGGGTCTGAGGTAGTGGGGCTCCGTCATCTCT
TCCGCCGCCCTCGAAAGTAAACTTTGCCACTCCACCCGCGGGGTCCCCAGTTCTCGCCGCAGTG
CCTCCGGGCGTCGGGGTTCCGCGTCAGGGCCTGTCTGCCTCCCCCGGCGTGGGGCCTTGGGCGC
CATGGACGCGTCGGCGCTGGAGCGGGACGCCGTGCAGTTCGCGCGGCTGGCAGTGCAGCGCGAC
CACGAAGGCCGCTACTCTGAGGCGGTGTTTTACTACAAGGAAGCTGCCCAAGCTTTAATTTATG
CTGAGATGGCAGGATCCAGCCTAGAAAGGATCCAAGAGAAGATCAATGAGTATCTGGAAAGAGT
GCAAGCCCTTCACTCTGCAGTTCAGTCAAAGAGTACTGATCCTTTGAAATCAAAACACCAGTTG
GATCTAGAACGTGCCCATTTTCTTGTTACACAAGCTTTCGATGAAGATGAAAAGGGGAATGTGG
AAGATGCCATAGAATTATATACAGAAGCTGTGGAACTCTGTCTAAAAACCTCTTCTGAAACTGC
TGACAAGACTCTGCAAAATAAATTGAAACAGTTGGCTCGACAGGCACTAGATAGAGCAGAAGCA
TTGAGTGAACCTTTGACAAAGCCATTTTGCAAACTCAAGTCAGCAAATATGAAAACAAAGACTC
CTCCAGTAAGAACACACTTTCCTCTAGGACCTAATCCTTTCGTTGAAAAGCCTCAAGCATTTAT
AAGTCCACAGTCATGTGATGCGCAAGGACAGAAGTACACAGCAGAAGAGATAGAAGTGCTCAGG
ACAACATCAAAAATAAATGGTGTAGAATATGTTCCTTTCATGAGTGTTGATCTAAGGGAACGCT
TTGCTTATCCAATGCCTTTTTGTGATAGGTTGGGCAAGCTTCCATTATCACCTAAACAAAAAAC
TACATTTTCTAAATGGGTACGACCGGAAGATCTCACCAACAATCCTACAATGATATACACTGTG
TCCAGTTTTAGCATAAAGCAGACAATAGTATCAGATTGTTCCTTTGTGGCATCGTTGGCTATCA
GTGCAGCGTATGAGAGACGATTCAATAAGAAGTTAATTACCAGCATAATTTACCCCCAGAATAA
GGATGGAGAACCAGAGTACAATCCCTGTGGAAAGTATATGGTAAAGCTTCACCTCAATGGTGTT
CCGAGAAAGGTGATAATTGATGACCAGTTACCTGTTGATCACAAAGGAGAATTGCTGTGTTCTT
ATTCCAACAATAAAAGTGAATTGTGGGTGTCACTTATAGAGAAAGCATACATGAAAGTTATGGG
AGGATATGATTTCCCAGGATCCAACTCAAATATTGATCTGCATGCACTGACTGGGTGGATACCA
GAAAGGATTGCCATGCATTCAGATAGCCAGACGTTCAGTAAGGATAACTCATTCAGAATGCTTT
ATCAAAGATTTCACAAAGGAGATGTCCTCATCACCGCATCGACGGGAGTAATGACTGAAGCTGA
AGGGGAGAAGTGGGGCCTGGTTCCCACTCATGCCTATGCGGTTTTGGATATTAGAGAGTTCAAG
GGGCTGAGATTTATTCAGTTAAAAAACCCTTGGAGCCATTTACGCTGGAAAGGAAGGTACAGTG
AGAATGATGTGAAAAACTGGACCCCAGAATTGCAGAAGTATTTAAACTTTGATCCACGAACAGC
TCAGAAAATAGATAATGGAATATTTTGGATTTCCTGGGATGATCTTTGCCAGTATTATGATGTA
GTTTATTTGAGTTGGAATCCAGCTCTTTTTAAAGAATCAACTTGCATTCACAGGATGACTTCGC
AAATAACCGTGAGTTTATCACAATGGTTGTGTACAAGACTGATGGCAAGAAGGTTTACTACCCA
GGTGTATTCAGCCTGCAGCTTTACTTTTTCGAAGATCCCTTCACCATACACCTTATCCAAACGG
ATAAATGGAAAGTGGAGTGGTCAAAGTGCTGGAGGATGTGGAAATTTTCAGGAGACTCACAAAA
ATAACCCCATCTACCAATTCCATATAGATAAGACTGGACCGTTATTGATTGAGCTGAGAGGACC
AAGGCAATACAGTGTTGGATTTGAGGTTGTAGCAGTTTCCATAATGGGAGATCCTGGTCCTCAT
GGCTTTCAGAGGAAATCTAGTGGTGACTATAGGTGTGGATTTTGCTACTTAGAACTGGAAAACA
TACCTGCTGGGATCTTTAATATCATCCCTAGTACTTTTTTGCCTAAACAAGAAGGACCTTTTTT
CTTGGACTTTAATAGTACTGTCCCCATCAAGACAACACAACTCCAATGATTGAGAACTCTCAGC
TATTACTGGATTCCATATTTCCCAGTCTCAGCTCTTCAGACAAGGAGACAAATCACGATGGTGA
ACCATCAGAATGGAATTAAATCAAAAGCATGTTACGGAGTCTGGTGCTCGTTGTGGTGTTTGGT
AAGGATTTTAGATAGTGGAATTACCTTAATCACCTGAAATACTGTTTACATGGTTTGTGCACAC
AGAGCTGGCGTGTACTCGGTGGCGGCTCTGTGTAAATCACAGGCTAGATTCAGCCATCACTGGG
AGATGCTTTCGTTAATAGGACACGAGGAGGACAATGAGGACCACAGGTCCACTGAGTGCAAGAG
CAGCCTAGTTTAGGATCTTGAAATACCTATGTTTCCTGTTTTTACAGAGCACGTACGTTTAGCC
CATTTATGTTGACCCCACCATACATCTTAAACAACTAATTACCAAATGAATTAGGTCACTGCAA
CTAATTTGAATTTTTCATTGTGTCTTTAATGTTTATTGTCGTGTAGCTGTTAAGCTTTAAAAAC
CGCTGTTTAGCTTAGCATGGAGATGCTCAGGCTTAAGAATGAAGGTTGTCAGTGTTAGGTGCAT
TGTCCATTGTAGAGAGGACCGAAGTATATTTACTGTTGCTGTTCTTAGTTCTTAGCAGGTTGGT
GAATGTAGCAATCAGATGGAAATGCTGAGGTTTAACCGTAGGGTTTTAATTGCTCTGTAGTCAG
TGCTTTCATCATGGGGACTTGGGGAGTCCTTGAGAATTTAGTATATGGTGACTGAGTTATACAG
CATTCATAAAAAGTGAGTGGTCAGGAATTAGTGTTTACATAAAATCATCACTGCAGAATGATGC
TCAAGATTTTCAAGTTCTGGAAAATAGGATGGGATCTGTCATTGTCTCTACTTTATAATTATCA
AATCTATTTCTACTGCCTTTGATTGAAATAAAATATTTATACTTATGGAAACTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001347116	(Get FASTA)	NCBI Sequence Viewer
	NP_001409119	(Get FASTA)	NCBI Sequence Viewer
	NP_001409120	(Get FASTA)	NCBI Sequence Viewer
	NP_001409121	(Get FASTA)	NCBI Sequence Viewer
	NP_001409122	(Get FASTA)	NCBI Sequence Viewer
	NP_001409123	(Get FASTA)	NCBI Sequence Viewer
	NP_001409124	(Get FASTA)	NCBI Sequence Viewer
	NP_033926	(Get FASTA)	NCBI Sequence Viewer
	XP_036014323	(Get FASTA)	NCBI Sequence Viewer
	XP_036014324	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA78731	(Get FASTA)	NCBI Sequence Viewer
	CAB39203	(Get FASTA)	NCBI Sequence Viewer
	EDL24806	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000022451
	ENSMUSP00000022451.8
	ENSMUSP00000118596.2
	ENSMUSP00000119214.2
GenBank Protein	Q9R1S8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_033926 ⟸ NM_009796
- Peptide Label:	isoform 1
- UniProtKB:	Q9Z0P9 (UniProtKB/Swiss-Prot), Q9R1S8 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MDASALERDAVQFARLAVQRDHEGRYSEAVFYYKEAAQALIYAEMAGSSLERIQEKINEYLERV QALHSAVQSKSTDPLKSKHQLDLERAHFLVTQAFDEDEKGNVEDAIELYTEAVELCLKTSSETA DKTLQNKLKQLARQALDRAEALSEPLTKPFCKLKSANMKTKTPPVRTHFPLGPNPFVEKPQAFI SPQSCDAQGQKYTAEEIEVLRTTSKINGVEYVPFMSVDLRERFAYPMPFCDRLGKLPLSPKQKT TFSKWVRPEDLTNNPTMIYTVSSFSIKQTIVSDCSFVASLAISAAYERRFNKKLITSIIYPQNK DGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGELLCSYSNNKSELWVSLIEKAYMKVMG GYDFPGSNSNIDLHALTGWIPERIAMHSDSQTFSKDNSFRMLYQRFHKGDVLITASTGVMTEAE GEKWGLVPTHAYAVLDIREFKGLRFIQLKNPWSHLRWKGRYSENDVKNWTPELQKYLNFDPRTA QKIDNGIFWISWDDLCQYYDVVYLSWNPALFKESTCIHSTWDAKQGPVKDAYSLANNPQYKLEV QCPQGGAAVWVLLSRHITDKDDFANNREFITMVVYKTDGKKVYYPADPPPYIDGIRINSPHYLT KIKLTTPGTHTFTLVVSQYEKQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKWSGQSAGGC GNFQETHKNNPIYQFHIDKTGPLLIELRGPRQYSVGFEVVAVSIMGDPGPHGFQRKSSGDYRCG FCYLELENIPAGIFNIIPSTFLPKQEGPFFLDFNSTVPIKTTQLQ hide sequence

RefSeq Acc Id:	NP_001347116 ⟸ NM_001360187
- Peptide Label:	isoform 2

RefSeq Acc Id:

ENSMUSP00000118596 ⟸ ENSMUST00000143472

RefSeq Acc Id:

ENSMUSP00000119214 ⟸ ENSMUST00000152182

RefSeq Acc Id:

ENSMUSP00000022451 ⟸ ENSMUST00000022451

RefSeq Acc Id:	XP_036014324 ⟸ XM_036158431
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_036014323 ⟸ XM_036158430
- Peptide Label:	isoform X1

RefSeq Acc Id:	NP_001409124 ⟸ NM_001422195
- Peptide Label:	isoform 4

RefSeq Acc Id:	NP_001409120 ⟸ NM_001422191
- Peptide Label:	isoform 4

RefSeq Acc Id:	NP_001409119 ⟸ NM_001422190
- Peptide Label:	isoform 3

RefSeq Acc Id:	NP_001409121 ⟸ NM_001422192
- Peptide Label:	isoform 4

RefSeq Acc Id:	NP_001409122 ⟸ NM_001422193
- Peptide Label:	isoform 4

RefSeq Acc Id:	NP_001409123 ⟸ NM_001422194
- Peptide Label:	isoform 4

Protein Domains

Calpain catalytic

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9R1S8-F1-model_v2	AlphaFold	Q9R1S8	1-813	view protein structure

Promoters

RGD ID:

8681828

Promoter ID:

EPDNEW_M18945

Type:

initiation region

Name:

Capn7_1

Description:

Mus musculus calpain 7 , transcript variant 1, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	14	31,336,710 - 31,336,770	EPDNEW

RGD ID:

6824752

Promoter ID:

MM_KWN:16108

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

OTTMUST00000069127, OTTMUST00000069128, OTTMUST00000069129, UC007SXN.1

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	14	32,149,536 - 32,150,036 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1338030	AgrOrtholog
Ensembl Genes	ENSMUSG00000021893	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000022451	ENTREZGENE
	ENSMUST00000022451.14	UniProtKB/Swiss-Prot
	ENSMUST00000143472.8	UniProtKB/TrEMBL
	ENSMUST00000152182.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.380	UniProtKB/Swiss-Prot
	Cysteine proteinases	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Phosphotransferase system, lactose/cellobiose-type IIA subunit	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Calpain_cysteine_protease	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Calpain_domain_III	UniProtKB/Swiss-Prot
	Calpain_III	UniProtKB/Swiss-Prot
	Calpain_III_sf	UniProtKB/Swiss-Prot
	MIT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIT_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Papain-like_cys_pep_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Peptidase_C2_calpain_cat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:12339	UniProtKB/Swiss-Prot
MGD	MGI:1338030	ENTREZGENE
NCBI Gene	12339	ENTREZGENE
PANTHER	CALPAIN-7	UniProtKB/Swiss-Prot
	CALPAIN-7	UniProtKB/Swiss-Prot
	CALPAIN-7	UniProtKB/TrEMBL
	CALPAIN-7	UniProtKB/TrEMBL
Pfam	Calpain_III	UniProtKB/Swiss-Prot
	MIT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Peptidase_C2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Capn7	PhenoGen
PRINTS	CALPAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	CALPAIN_CAT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	calpain_III	UniProtKB/Swiss-Prot
	CysPc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF116846	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF49758	UniProtKB/Swiss-Prot
	SSF54001	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	CAN7_MOUSE	UniProtKB/Swiss-Prot
	F2Z3X0_MOUSE	UniProtKB/TrEMBL
	Q9R1S8	ENTREZGENE
	Q9Z0P9	ENTREZGENE
UniProt Secondary	Q9Z0P9	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Mammalian Phenotype