4933427D14Rik (RIKEN cDNA 4933427D14 gene) - Rat Genome Database

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Gene: 4933427D14Rik (RIKEN cDNA 4933427D14 gene) Mus musculus
Analyze
Symbol: 4933427D14Rik
Name: RIKEN cDNA 4933427D14 gene
RGD ID: 1312340
MGI Page MGI
Description: Predicted to be involved in cytosolic ciliogenesis and protein localization to centrosome. Predicted to be located in centrosome and cytosol. Predicted to be active in centriolar satellite. Is expressed in several structures, including alimentary system; brain; egg cylinder; genitourinary system; and hemolymphoid system gland. Human ortholog(s) of this gene implicated in Joubert syndrome; asphyxiating thoracic dystrophy; and orofaciodigital syndrome. Orthologous to human KIAA0753 (KIAA0753).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C85113; hypothetical protein LOC74477; Kiaa0753; MNR; RP23-207N15.3; uncharacterized protein KIAA0753
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,044,755 - 72,098,308 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,044,755 - 72,098,285 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl1172,044,923 - 72,097,852 (-)EnsemblGRCm39 Ensembl
GRCm381172,153,929 - 72,207,482 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,153,929 - 72,207,459 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,154,097 - 72,207,026 (-)EnsemblGRCm38mm10GRCm38
MGSCv371171,967,599 - 72,016,873 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361171,970,292 - 72,019,566 (-)NCBIMGSCv36mm8
Celera1179,677,913 - 79,729,862 (-)NCBICelera
Cytogenetic Map11B4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:11544199   PMID:12466851   PMID:12477932   PMID:15368895   PMID:16141072  
PMID:16141073   PMID:21873635   PMID:24194600   PMID:26494787   PMID:27626380   PMID:28700664   PMID:34241634  


Genomics

Comparative Map Data
4933427D14Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,044,755 - 72,098,308 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,044,755 - 72,098,285 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl1172,044,923 - 72,097,852 (-)EnsemblGRCm39 Ensembl
GRCm381172,153,929 - 72,207,482 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,153,929 - 72,207,459 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,154,097 - 72,207,026 (-)EnsemblGRCm38mm10GRCm38
MGSCv371171,967,599 - 72,016,873 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361171,970,292 - 72,019,566 (-)NCBIMGSCv36mm8
Celera1179,677,913 - 79,729,862 (-)NCBICelera
Cytogenetic Map11B4NCBI
KIAA0753
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38176,578,147 - 6,640,711 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl176,578,147 - 6,640,711 (-)EnsemblGRCh38hg38GRCh38
GRCh37176,481,467 - 6,544,031 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36176,422,369 - 6,484,971 (-)NCBINCBI36Build 36hg18NCBI36
Celera176,502,636 - 6,565,303 (-)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef176,376,904 - 6,439,531 (-)NCBIHuRef
CHM1_1176,491,920 - 6,554,542 (-)NCBICHM1_1
T2T-CHM13v2.0176,478,727 - 6,541,342 (-)NCBIT2T-CHM13v2.0
4933427D14Rikl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81057,282,433 - 57,331,259 (-)NCBIGRCr8
mRatBN7.21056,783,869 - 56,832,668 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1056,783,775 - 56,832,968 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01058,726,721 - 58,776,718 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1058,729,306 - 58,771,908 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01058,467,538 - 58,517,106 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41059,052,750 - 59,099,738 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11059,015,497 - 59,113,389 (-)NCBI
Celera1055,912,606 - 55,962,601 (-)NCBICelera
Cytogenetic Map10q24NCBI
Kiaa0753
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546712,071,435 - 12,139,485 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546712,074,413 - 12,144,672 (-)NCBIChiLan1.0ChiLan1.0
KIAA0753
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21914,178,594 - 14,240,906 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11716,144,764 - 16,207,077 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0176,615,903 - 6,678,233 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1176,603,983 - 6,666,231 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl176,603,983 - 6,662,083 (-)Ensemblpanpan1.1panPan2
KIAA0753
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1530,708,361 - 30,749,773 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl530,708,253 - 30,748,878 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha530,836,986 - 30,881,688 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0530,806,110 - 30,850,867 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl530,809,956 - 30,850,852 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1530,775,559 - 30,816,542 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0530,730,920 - 30,775,588 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0530,904,154 - 30,948,902 (+)NCBIUU_Cfam_GSD_1.0
Kiaa0753
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560254,485,513 - 54,555,375 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366771,360,003 - 1,415,652 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366771,354,601 - 1,415,462 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0753
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1250,742,773 - 50,898,331 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11250,737,158 - 50,793,187 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21252,736,453 - 52,792,146 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA0753
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,952,531 - 6,016,399 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl165,953,965 - 6,010,611 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605915,424,235 - 15,487,934 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa0753
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247867,399,057 - 7,468,621 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in 4933427D14Rik
1398 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2822
Count of miRNA genes:801
Interacting mature miRNAs:1046
Transcripts:ENSMUST00000108505, ENSMUST00000108506, ENSMUST00000131546, ENSMUST00000142530, ENSMUST00000144553, ENSMUST00000151411, ENSMUST00000154093, ENSMUST00000156696
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116899082672490826Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116899082672490826Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116899082672490826Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116899082672490826Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116899082672490826Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116899082672490826Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116899082672490826Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116899082672490826Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116899082672490826Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1301681Sle13_msystematic lupus erythematosus susceptibility 13 (mouse)Not determined1170691198104691366Mouse
1300651Pcyts3_mplasmacytoma susceptibility 3 (mouse)Not determined1170691198104691366Mouse
4141339Nilac2_mnicotine induced locomotor activity 2 (mouse)Not determined1170691198104691366Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse

Markers in Region
RH127127  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381172,154,111 - 72,154,339UniSTSGRCm38
MGSCv371171,967,613 - 71,967,841UniSTSGRCm37
Celera1179,677,927 - 79,678,155UniSTS
Cytogenetic Map11B4UniSTS
Whitehead/MRC_RH11921.47UniSTS
22.MMHAP12FRH7.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381172,168,041 - 72,168,199UniSTSGRCm38
MGSCv371171,981,543 - 71,981,701UniSTSGRCm37
Celera1179,691,862 - 79,692,020UniSTS
Cytogenetic Map11B4UniSTS
Whitehead_YAC11 UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000108505   ⟹   ENSMUSP00000104145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,086,201 - 72,098,257 (-)Ensembl
GRCm38.p6 Ensembl1172,195,375 - 72,207,431 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108506   ⟹   ENSMUSP00000104146
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,044,923 - 72,094,197 (-)Ensembl
GRCm38.p6 Ensembl1172,154,097 - 72,203,371 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131546   ⟹   ENSMUSP00000122273
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,044,756 - 72,098,093 (-)Ensembl
GRCm38.p6 Ensembl1172,153,930 - 72,207,267 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142530   ⟹   ENSMUSP00000115276
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,044,755 - 72,098,285 (-)Ensembl
GRCm38.p6 Ensembl1172,153,929 - 72,207,459 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144553
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,089,436 - 72,093,438 (-)Ensembl
GRCm38.p6 Ensembl1172,198,610 - 72,202,612 (-)Ensembl
RefSeq Acc Id: ENSMUST00000151411
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,044,755 - 72,046,129 (-)Ensembl
GRCm38.p6 Ensembl1172,153,929 - 72,155,303 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,089,189 - 72,098,046 (-)Ensembl
GRCm38.p6 Ensembl1172,198,363 - 72,207,220 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156696
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,046,219 - 72,066,064 (-)Ensembl
GRCm38.p6 Ensembl1172,155,393 - 72,175,238 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204457   ⟹   ENSMUSP00000144817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,044,923 - 72,097,852 (-)Ensembl
GRCm38.p6 Ensembl1172,154,097 - 72,207,026 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238653   ⟹   ENSMUSP00000158687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,044,923 - 72,098,257 (-)Ensembl
GRCm38.p6 Ensembl1172,154,097 - 72,207,431 (-)Ensembl
RefSeq Acc Id: NM_001361564   ⟹   NP_001348493
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,044,755 - 72,098,308 (-)NCBI
GRCm381172,153,929 - 72,207,482 (-)NCBI
Sequence:
RefSeq Acc Id: NM_028963   ⟹   NP_083239
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,044,755 - 72,094,597 (-)NCBI
GRCm381172,153,929 - 72,203,771 (-)NCBI
MGSCv371171,967,599 - 72,016,873 (-)RGD
Celera1179,677,913 - 79,729,862 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_155065
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,044,755 - 72,098,308 (-)NCBI
GRCm381172,153,929 - 72,207,482 (-)NCBI
Sequence:
RefSeq Acc Id: NR_155066
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,044,755 - 72,098,308 (-)NCBI
GRCm381172,153,929 - 72,207,482 (-)NCBI
Sequence:
RefSeq Acc Id: NR_155067
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,044,755 - 72,098,308 (-)NCBI
GRCm381172,153,929 - 72,207,482 (-)NCBI
Sequence:
RefSeq Acc Id: NP_083239   ⟸   NM_028963
- UniProtKB: Q9CUC0 (UniProtKB/Swiss-Prot),   Q80XQ5 (UniProtKB/Swiss-Prot),   Q6A000 (UniProtKB/Swiss-Prot),   A0A0R4J1C3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001348493   ⟸   NM_001361564
- UniProtKB: Q9CUC0 (UniProtKB/Swiss-Prot),   Q80XQ5 (UniProtKB/Swiss-Prot),   Q6A000 (UniProtKB/Swiss-Prot),   A0A0R4J1C3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000104146   ⟸   ENSMUST00000108506
RefSeq Acc Id: ENSMUSP00000104145   ⟸   ENSMUST00000108505
RefSeq Acc Id: ENSMUSP00000122273   ⟸   ENSMUST00000131546
RefSeq Acc Id: ENSMUSP00000144817   ⟸   ENSMUST00000204457
RefSeq Acc Id: ENSMUSP00000158687   ⟸   ENSMUST00000238653
RefSeq Acc Id: ENSMUSP00000115276   ⟸   ENSMUST00000142530

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6A000-F1-model_v2 AlphaFold Q6A000 1-959 view protein structure

Promoters
RGD ID:6821834
Promoter ID:MM_KWN:8303
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000060917
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361171,988,106 - 71,988,606 (-)MPROMDB
RGD ID:6821321
Promoter ID:MM_KWN:8306
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000021162,   ENSMUST00000108505,   OTTMUST00000013787,   OTTMUST00000013788,   OTTMUST00000060914,   OTTMUST00000060915,   UC007JYE.1,   UC007JYG.1,   UC007JYH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361172,020,041 - 72,021,217 (-)MPROMDB
RGD ID:8675414
Promoter ID:EPDNEW_M15738
Type:initiation region
Name:4933427D14Rik_1
Description:Mus musculus RIKEN cDNA 4933427D14 gene , transcript variant5, non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381172,207,482 - 72,207,542EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921727 AgrOrtholog
Ensembl Genes ENSMUSG00000020807 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSG00000107877 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000108505.2 UniProtKB/TrEMBL
  ENSMUST00000108506 ENTREZGENE
  ENSMUST00000108506.10 UniProtKB/TrEMBL
  ENSMUST00000131546.8 UniProtKB/TrEMBL
  ENSMUST00000142530 ENTREZGENE
  ENSMUST00000142530.8 UniProtKB/TrEMBL
  ENSMUST00000204457.3 UniProtKB/TrEMBL
  ENSMUST00000238653 ENTREZGENE
  ENSMUST00000238653.2 UniProtKB/TrEMBL
InterPro MNR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:74477 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1921727 ENTREZGENE
NCBI Gene 74477 ENTREZGENE
PANTHER PROTEIN MOONRAKER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR15732 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MNR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen 4933427D14Rik PhenoGen
UniProt A0A0N4SUT6_MOUSE UniProtKB/TrEMBL
  A0A0R4J1C3 ENTREZGENE, UniProtKB/TrEMBL
  A6QRF1_MOUSE UniProtKB/TrEMBL
  F2Z3W1_MOUSE UniProtKB/TrEMBL
  F2Z444_MOUSE UniProtKB/TrEMBL
  MOONR_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q80XQ5 ENTREZGENE
  Q9CUC0 ENTREZGENE
UniProt Secondary Q80XQ5 UniProtKB/Swiss-Prot
  Q9CUC0 UniProtKB/Swiss-Prot