NDST2 (N-deacetylase and N-sulfotransferase 2) - Rat Genome Database

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Gene: NDST2 (N-deacetylase and N-sulfotransferase 2) Homo sapiens
Analyze
Symbol: NDST2
Name: N-deacetylase and N-sulfotransferase 2
RGD ID: 1312297
HGNC Page HGNC
Description: Predicted to have [heparan sulfate]-glucosamine N-sulfotransferase activity and deacetylase activity. Predicted to be involved in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process and regulation of angiotensin levels in blood. Predicted to localize to Golgi apparatus.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2; glucosaminyl N-deacetylase/N-sulfotransferase 2; HSST2; MGC129697; MGC129705; N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2; N-deacetylase/N-sulfotransferase 2; N-heparan sulfate sulfotransferase 2; N-HSST 2; NDST-2; NST2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1073,801,911 - 73,811,798 (-)EnsemblGRCh38hg38GRCh38
GRCh381073,801,916 - 73,811,820 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371075,561,674 - 75,571,578 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361075,231,675 - 75,241,348 (-)NCBINCBI36hg18NCBI36
Build 341075,231,674 - 75,241,348NCBI
Celera1068,844,842 - 68,854,762 (-)NCBI
Cytogenetic Map10q22.2NCBI
HuRef1069,556,745 - 69,566,664 (-)NCBIHuRef
CHM1_11075,843,450 - 75,853,374 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:9601056   PMID:9915799   PMID:11865082   PMID:12045103   PMID:12477932   PMID:12876215   PMID:15146197   PMID:15489334   PMID:16343444   PMID:16344560   PMID:16385451   PMID:21873635  
PMID:26186194   PMID:28514442  


Genomics

Comparative Map Data
NDST2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1073,801,911 - 73,811,798 (-)EnsemblGRCh38hg38GRCh38
GRCh381073,801,916 - 73,811,820 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371075,561,674 - 75,571,578 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361075,231,675 - 75,241,348 (-)NCBINCBI36hg18NCBI36
Build 341075,231,674 - 75,241,348NCBI
Celera1068,844,842 - 68,854,762 (-)NCBI
Cytogenetic Map10q22.2NCBI
HuRef1069,556,745 - 69,566,664 (-)NCBIHuRef
CHM1_11075,843,450 - 75,853,374 (-)NCBICHM1_1
Ndst2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391420,773,798 - 20,784,638 (-)NCBIGRCm39mm39
GRCm39 Ensembl1420,773,798 - 20,784,630 (-)Ensembl
GRCm381420,723,730 - 20,734,570 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1420,723,730 - 20,734,562 (-)EnsemblGRCm38mm10GRCm38
MGSCv371421,542,952 - 21,553,784 (-)NCBIGRCm37mm9NCBIm37
MGSCv361419,512,291 - 19,518,879 (-)NCBImm8
Celera1417,106,546 - 17,117,371 (-)NCBICelera
Cytogenetic Map14A3NCBI
Ndst2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2153,563,358 - 3,573,801 (+)NCBI
Rnor_6.0 Ensembl153,996,048 - 4,006,491 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,754,262 - 3,760,663 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0153,995,797 - 4,006,491 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0153,726,893 - 3,737,357 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4153,788,239 - 3,798,682 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1153,792,088 - 3,798,551 (+)NCBI
Celera151,020,455 - 1,030,898 (-)NCBICelera
Cytogenetic Map15p16NCBI
Ndst2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495543718,090,198 - 18,099,328 (+)NCBIChiLan1.0ChiLan1.0
NDST2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11072,997,205 - 73,006,645 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01070,324,842 - 70,335,169 (-)NCBIMhudiblu_PPA_v0panPan3
NDST2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1424,235,051 - 24,243,411 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl424,231,492 - 24,243,455 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha424,372,648 - 24,381,010 (-)NCBI
ROS_Cfam_1.0424,515,424 - 24,523,770 (-)NCBI
UMICH_Zoey_3.1424,412,561 - 24,420,910 (-)NCBI
UNSW_CanFamBas_1.0424,612,991 - 24,621,347 (-)NCBI
UU_Cfam_GSD_1.0424,968,044 - 24,976,390 (-)NCBI
Ndst2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721356,843,897 - 56,854,126 (+)NCBI
SpeTri2.0NW_0049365215,336,658 - 5,346,704 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDST2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11476,525,998 - 76,534,695 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21482,652,638 - 82,661,329 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDST2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1957,561,349 - 57,574,145 (+)NCBI
Vero_WHO_p1.0NW_02366604818,140,898 - 18,152,801 (+)NCBI
Ndst2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247547,316,421 - 7,322,539 (-)NCBI

Position Markers
WI-12185  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,572,288 - 75,572,412UniSTSGRCh37
Build 361075,242,294 - 75,242,418RGDNCBI36
Celera1068,855,458 - 68,855,582RGD
Cytogenetic Map10q22UniSTS
HuRef1069,567,347 - 69,567,471UniSTS
GeneMap99-GB4 RH Map10381.17UniSTS
Whitehead-RH Map10453.6UniSTS
NCBI RH Map10940.4UniSTS
G54076  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,883 - 75,561,988UniSTSGRCh37
Build 361075,231,889 - 75,231,994RGDNCBI36
Celera1068,845,056 - 68,845,161RGD
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map10q22UniSTS
HuRef1069,556,959 - 69,557,064UniSTS
GDB:642165  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,696 - 75,561,770UniSTSGRCh37
Build 361075,231,702 - 75,231,776RGDNCBI36
Celera1068,844,869 - 68,844,943RGD
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map10q22UniSTS
HuRef1069,556,772 - 69,556,846UniSTS
A002M12  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,364 - 75,561,518UniSTSGRCh37
Build 361075,231,370 - 75,231,524RGDNCBI36
Celera1068,844,537 - 68,844,691RGD
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map10q22UniSTS
HuRef1069,556,440 - 69,556,594UniSTS
GeneMap99-GB4 RH Map10380.97UniSTS
Whitehead-RH Map10458.2UniSTS
NCBI RH Map10940.4UniSTS
RH79148  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,712 - 75,561,862UniSTSGRCh37
GRCh371075,561,712 - 75,561,843UniSTSGRCh37
Build 361075,231,718 - 75,231,849RGDNCBI36
Celera1068,844,885 - 68,845,016RGD
Celera1068,844,885 - 68,845,035UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map10q22.2UniSTS
HuRef1069,556,788 - 69,556,919UniSTS
GeneMap99-GB4 RH Map10381.07UniSTS
NCBI RH Map10940.4UniSTS
WI-21009  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,194 - 75,561,447UniSTSGRCh37
Build 361075,231,200 - 75,231,453RGDNCBI36
Celera1068,844,367 - 68,844,620RGD
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map10q22UniSTS
HuRef1069,556,270 - 69,556,523UniSTS
GeneMap99-GB4 RH Map10381.07UniSTS
Whitehead-RH Map10458.2UniSTS
SHGC-31617  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,953 - 75,562,173UniSTSGRCh37
Build 361075,231,959 - 75,232,179RGDNCBI36
Celera1068,845,126 - 68,845,346RGD
Cytogenetic Map10q22UniSTS
HuRef1069,557,029 - 69,557,249UniSTS
GeneMap99-G3 RH Map103370.0UniSTS
A006I22  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,769 - 75,561,892UniSTSGRCh37
Build 361075,231,775 - 75,231,898RGDNCBI36
Celera1068,844,942 - 68,845,065RGD
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map10q22UniSTS
HuRef1069,556,845 - 69,556,968UniSTS
GeneMap99-GB4 RH Map10380.97UniSTS
G20846  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371075,561,769 - 75,561,892UniSTSGRCh37
Build 361075,231,775 - 75,231,898RGDNCBI36
Celera1068,844,942 - 68,845,065RGD
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map10q22UniSTS
HuRef1069,556,845 - 69,556,968UniSTS
D15S1477  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4q32-q35UniSTS
Cytogenetic Map5q11UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map16p13.13-p13.12UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map2q31UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q11.21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map1q31.3UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map3p25-p24UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map3p12UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map6p21.1-p12.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map14q11.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map9p22.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map10q25UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map15q21-q23UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map11q12UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map22q12UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map17qUniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p24.2UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2818
Count of miRNA genes:910
Interacting mature miRNAs:1072
Transcripts:ENST00000299641, ENST00000309979, ENST00000429742, ENST00000463410, ENST00000465929, ENST00000603027, ENST00000603706
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 2141 2105 1201 178 1124 17 3324 986 1988 62 1128 1230 161 1198 2058
Low 318 873 499 414 881 421 1037 1233 1743 336 382 420 9 6 730 5
Below cutoff 145 22 240 193 485 194 270 37 108 214 208 277 11 1 2 4

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_046905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001330107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_160743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_160744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_160745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005270256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011540310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB208870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC022400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF042084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK300520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL045074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU125430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC110589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB959603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN266932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DN999958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U36601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000299641   ⟹   ENSP00000299641
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,801,911 - 73,808,731 (-)Ensembl
RefSeq Acc Id: ENST00000309979   ⟹   ENSP00000310657
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,801,916 - 73,811,598 (-)Ensembl
RefSeq Acc Id: ENST00000398701
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,810,684 - 73,811,798 (-)Ensembl
RefSeq Acc Id: ENST00000429742   ⟹   ENSP00000392733
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,802,596 - 73,803,344 (-)Ensembl
RefSeq Acc Id: ENST00000463410
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,806,876 - 73,807,524 (-)Ensembl
RefSeq Acc Id: ENST00000465929
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,808,467 - 73,809,076 (-)Ensembl
RefSeq Acc Id: ENST00000603027   ⟹   ENSP00000475031
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,796,514 - 73,811,651 (-)Ensembl
RefSeq Acc Id: ENST00000603706   ⟹   ENSP00000476336
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1073,797,129 - 73,803,077 (-)Ensembl
RefSeq Acc Id: NM_001330107   ⟹   NP_001317036
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,801,916 - 73,811,598 (-)NCBI
Sequence:
RefSeq Acc Id: NM_003635   ⟹   NP_003626
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,801,916 - 73,811,598 (-)NCBI
GRCh371075,561,669 - 75,571,589 (-)RGD
Build 361075,231,675 - 75,241,348 (-)NCBI Archive
Celera1068,844,842 - 68,854,762 (-)RGD
HuRef1069,556,745 - 69,566,664 (-)ENTREZGENE
CHM1_11075,843,450 - 75,853,374 (-)NCBI
Sequence:
RefSeq Acc Id: NR_160743
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,801,916 - 73,811,820 (-)NCBI
RefSeq Acc Id: NR_160744
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,801,916 - 73,811,820 (-)NCBI
RefSeq Acc Id: NR_160745
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,810,687 - 73,811,820 (-)NCBI
RefSeq Acc Id: XM_005270256   ⟹   XP_005270313
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,801,918 - 73,807,189 (-)NCBI
GRCh371075,561,669 - 75,571,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011540310   ⟹   XP_011538612
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,801,918 - 73,809,844 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_003626   ⟸   NM_003635
- Peptide Label: isoform 1
- UniProtKB: P52849 (UniProtKB/Swiss-Prot),   B4E139 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005270313   ⟸   XM_005270256
- Peptide Label: isoform X2
- UniProtKB: B4DU70 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011538612   ⟸   XM_011540310
- Peptide Label: isoform X1
- UniProtKB: P52849 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001317036   ⟸   NM_001330107
- Peptide Label: isoform 2
- UniProtKB: P52849 (UniProtKB/Swiss-Prot),   S4R438 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000310657   ⟸   ENST00000309979
RefSeq Acc Id: ENSP00000392733   ⟸   ENST00000429742
RefSeq Acc Id: ENSP00000299641   ⟸   ENST00000299641
RefSeq Acc Id: ENSP00000475031   ⟸   ENST00000603027
RefSeq Acc Id: ENSP00000476336   ⟸   ENST00000603706
Protein Domains
HSNSD   Sulfotransfer_1

Promoters
RGD ID:7217877
Promoter ID:EPDNEW_H14684
Type:initiation region
Name:NDST2_4
Description:N-deacetylase and N-sulfotransferase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14685  EPDNEW_H14686  EPDNEW_H14687  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,807,768 - 73,807,828EPDNEW
RGD ID:7217879
Promoter ID:EPDNEW_H14685
Type:single initiation site
Name:NDST2_3
Description:N-deacetylase and N-sulfotransferase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14684  EPDNEW_H14686  EPDNEW_H14687  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,808,838 - 73,808,898EPDNEW
RGD ID:7217881
Promoter ID:EPDNEW_H14686
Type:initiation region
Name:NDST2_2
Description:N-deacetylase and N-sulfotransferase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14684  EPDNEW_H14685  EPDNEW_H14687  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,809,115 - 73,809,175EPDNEW
RGD ID:7217883
Promoter ID:EPDNEW_H14687
Type:multiple initiation site
Name:NDST2_1
Description:N-deacetylase and N-sulfotransferase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H14684  EPDNEW_H14685  EPDNEW_H14686  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381073,811,598 - 73,811,658EPDNEW
RGD ID:6787911
Promoter ID:HG_KWN:10089
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000048708
Position:
Human AssemblyChrPosition (strand)Source
Build 361075,232,726 - 75,233,477 (-)MPROMDB
RGD ID:6787912
Promoter ID:HG_KWN:10090
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:UC001JVL.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361075,233,529 - 75,234,029 (-)MPROMDB
RGD ID:6787916
Promoter ID:HG_KWN:10091
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:UC009XRO.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361075,236,529 - 75,237,029 (-)MPROMDB
RGD ID:6787913
Promoter ID:HG_KWN:10092
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   K562,   Lymphoblastoid
Transcripts:ENST00000299641,   OTTHUMT00000048709,   OTTHUMT00000048711
Position:
Human AssemblyChrPosition (strand)Source
Build 361075,237,171 - 75,239,232 (-)MPROMDB
RGD ID:6787924
Promoter ID:HG_KWN:10093
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_003635,   OTTHUMT00000048707
Position:
Human AssemblyChrPosition (strand)Source
Build 361075,241,264 - 75,241,764 (-)MPROMDB

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 10q21.2-22.2(chr10:62229688-74468143)x1 copy number loss See cases [RCV000052530] Chr10:62229688..74468143 [GRCh38]
Chr10:63989447..76227901 [GRCh37]
Chr10:63659453..75897907 [NCBI36]
Chr10:10q21.2-22.2
pathogenic
GRCh38/hg38 10q22.1-22.2(chr10:72720628-75612374)x1 copy number loss See cases [RCV000052531] Chr10:72720628..75612374 [GRCh38]
Chr10:74480386..77372132 [GRCh37]
Chr10:74150392..77042138 [NCBI36]
Chr10:10q22.1-22.2
pathogenic
GRCh38/hg38 10q21.1-22.2(chr10:58436466-74415216)x1 copy number loss See cases [RCV000052511] Chr10:58436466..74415216 [GRCh38]
Chr10:60196226..76174974 [GRCh37]
Chr10:59866232..75844980 [NCBI36]
Chr10:10q21.1-22.2
pathogenic
GRCh38/hg38 10q21.3-22.3(chr10:67196567-79422057)x3 copy number gain See cases [RCV000135438] Chr10:67196567..79422057 [GRCh38]
Chr10:68956325..81181813 [GRCh37]
Chr10:68626331..80851819 [NCBI36]
Chr10:10q21.3-22.3
pathogenic
GRCh38/hg38 10q21.3-22.2(chr10:63402579-75296099)x1 copy number loss See cases [RCV000136658] Chr10:63402579..75296099 [GRCh38]
Chr10:65162339..77055857 [GRCh37]
Chr10:64832345..76725863 [NCBI36]
Chr10:10q21.3-22.2
pathogenic|likely benign
GRCh38/hg38 10q11.23-23.2(chr10:50729367-87147204)x3 copy number gain See cases [RCV000138007] Chr10:50729367..87147204 [GRCh38]
Chr10:52489127..88906961 [GRCh37]
Chr10:52159133..88896941 [NCBI36]
Chr10:10q11.23-23.2
pathogenic
NM_003635.4(NDST2):c.25C>T (p.Arg9Cys) single nucleotide variant Anophthalmia-microphthalmia syndrome [RCV000207388] Chr10:73808364 [GRCh38]
Chr10:75568122 [GRCh37]
Chr10:10q22.2
likely benign
NM_003635.4(NDST2):c.199C>T (p.Arg67Trp) single nucleotide variant Anophthalmia-microphthalmia syndrome [RCV000207423] Chr10:73808190 [GRCh38]
Chr10:75567948 [GRCh37]
Chr10:10q22.2
likely benign
GRCh37/hg19 10q22.2-22.3(chr10:75542067-79428995)x1 copy number loss See cases [RCV000447510] Chr10:75542067..79428995 [GRCh37]
Chr10:10q22.2-22.3
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3 copy number gain See cases [RCV000448750] Chr10:93297..135378918 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143) copy number gain See cases [RCV000511389] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic|uncertain significance
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3 copy number gain See cases [RCV000510861] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10q22.2(chr10:75179409-76009153)x3 copy number gain See cases [RCV000511191] Chr10:75179409..76009153 [GRCh37]
Chr10:10q22.2
uncertain significance
GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1 copy number loss PARP Inhibitor response [RCV000626438] Chr10:42347406..135534747 [GRCh37]
Chr10:10q11.21-26.3
drug response
GRCh37/hg19 10q21.3-23.32(chr10:69040366-93194993)x3 copy number gain not provided [RCV000683289] Chr10:69040366..93194993 [GRCh37]
Chr10:10q21.3-23.32
pathogenic
GRCh37/hg19 10q22.2(chr10:75251395-75763287)x1 copy number loss not provided [RCV000849346] Chr10:75251395..75763287 [GRCh37]
Chr10:10q22.2
uncertain significance
GRCh37/hg19 10p15.3-q26.3(chr10:73232-135524321)x3 copy number gain not provided [RCV000749464] Chr10:73232..135524321 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:98087-135477883)x3 copy number gain not provided [RCV000749465] Chr10:98087..135477883 [GRCh37]
Chr10:10p15.3-q26.3
pathogenic

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:7681 AgrOrtholog
COSMIC NDST2 COSMIC
Ensembl Genes ENSG00000166507 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSG00000272916 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSP00000299641 UniProtKB/Swiss-Prot
  ENSP00000310657 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000392733 UniProtKB/TrEMBL
  ENSP00000475031 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000476336 UniProtKB/TrEMBL
Ensembl Transcript ENST00000299641 UniProtKB/Swiss-Prot
  ENST00000309979 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000398701 ENTREZGENE
  ENST00000429742 UniProtKB/TrEMBL
  ENST00000603027 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000603706 UniProtKB/TrEMBL
GTEx ENSG00000166507 GTEx
  ENSG00000272916 GTEx
HGNC ID HGNC:7681 ENTREZGENE
Human Proteome Map NDST2 Human Proteome Map
InterPro Heparan_SO4_deacetylase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NST/OST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfotransferase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:8509 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 8509 ENTREZGENE
OMIM 603268 OMIM
PANTHER PTHR10605 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam HSNSD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfotransfer_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA31487 PharmGKB
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B4DU70 ENTREZGENE, UniProtKB/TrEMBL
  B4E139 ENTREZGENE, UniProtKB/TrEMBL
  H7C032_HUMAN UniProtKB/TrEMBL
  NDST2_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  S4R438 ENTREZGENE, UniProtKB/TrEMBL
  V9GY34_HUMAN UniProtKB/TrEMBL
UniProt Secondary Q2TB32 UniProtKB/Swiss-Prot
  Q59H89 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-19 NDST2  N-deacetylase and N-sulfotransferase 2    N-deacetylase/N-sulfotransferase 2  Symbol and/or name change 5135510 APPROVED
2016-02-02 NDST2  N-deacetylase/N-sulfotransferase 2    N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2  Symbol and/or name change 5135510 APPROVED
2011-09-01 NDST2  N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2  NDST2  N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2  Symbol and/or name change 5135510 APPROVED