Slc43a3 (solute carrier family 43, member 3) - Rat Genome Database

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Gene: Slc43a3 (solute carrier family 43, member 3) Rattus norvegicus
Analyze
Symbol: Slc43a3
Name: solute carrier family 43, member 3
RGD ID: 1312016
Description: Predicted to enable fatty acid transmembrane transporter activity; purine nucleobase transmembrane transporter activity; and xenobiotic transmembrane transporter activity. Predicted to be involved in hypoxanthine transport. Predicted to be located in basolateral plasma membrane. Orthologous to human SLC43A3 (solute carrier family 43 member 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: equilibrative nucleobase transporter 1; LOC311170; solute carrier family 43 member 3
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8390,414,822 - 90,450,654 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl390,415,977 - 90,436,976 (+)EnsemblGRCr8
mRatBN7.2370,008,160 - 70,030,324 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl370,009,313 - 70,029,749 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx373,391,526 - 73,411,746 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0381,990,201 - 82,010,421 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0379,748,446 - 79,768,650 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0372,328,912 - 72,351,039 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl372,329,967 - 72,351,111 (+)Ensemblrn6Rnor6.0
Rnor_5.0378,844,067 - 78,866,170 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4368,152,750 - 68,173,186 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera369,362,503 - 69,382,667 (+)NCBICelera
RGSC_v3.1368,048,657 - 68,059,519 (+)NCBI
Cytogenetic Map3q24NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dinitrotoluene  (EXP)
3-iodothyronamine  (ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (EXP)
6alpha-methylprednisolone  (ISO)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
amphetamine  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
cytarabine  (ISO)
DDE  (ISO)
disodium selenite  (ISO)
doxorubicin  (ISO)
entinostat  (ISO)
folic acid  (ISO)
furan  (EXP)
gemcitabine  (ISO)
GSK-J4  (ISO)
inulin  (ISO)
isobutanol  (ISO)
isoprenaline  (ISO)
lipopolysaccharide  (ISO)
methylmercury chloride  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nitrofen  (EXP)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
pentanal  (ISO)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (ISO)
potassium chromate  (ISO)
prednisolone  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
serpentine asbestos  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Slc43a3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8390,414,822 - 90,450,654 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl390,415,977 - 90,436,976 (+)EnsemblGRCr8
mRatBN7.2370,008,160 - 70,030,324 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl370,009,313 - 70,029,749 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx373,391,526 - 73,411,746 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0381,990,201 - 82,010,421 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0379,748,446 - 79,768,650 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0372,328,912 - 72,351,039 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl372,329,967 - 72,351,111 (+)Ensemblrn6Rnor6.0
Rnor_5.0378,844,067 - 78,866,170 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4368,152,750 - 68,173,186 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera369,362,503 - 69,382,667 (+)NCBICelera
RGSC_v3.1368,048,657 - 68,059,519 (+)NCBI
Cytogenetic Map3q24NCBI
SLC43A3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381157,406,954 - 57,427,580 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1157,406,954 - 57,429,035 (-)Ensemblhg38GRCh38
GRCh371157,174,427 - 57,195,053 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361156,931,003 - 56,951,629 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1154,531,012 - 54,551,638 (-)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1153,523,533 - 53,544,157 (-)NCBIHuRef
CHM1_11157,040,482 - 57,061,097 (-)NCBICHM1_1
T2T-CHM13v2.01157,357,133 - 57,377,747 (-)NCBIT2T-CHM13v2.0
Slc43a3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39284,766,943 - 84,788,853 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl284,766,923 - 84,788,853 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38284,936,545 - 84,958,509 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl284,936,579 - 84,958,509 (+)Ensemblmm10GRCm38
MGSCv37284,776,813 - 84,798,666 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36284,737,499 - 84,758,782 (+)NCBIMGSCv36mm8
Celera286,535,187 - 86,557,192 (+)NCBICelera
Cytogenetic Map2DNCBI
cM Map249.45NCBI
SLC43A3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2958,563,421 - 58,583,924 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11159,580,410 - 59,600,587 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01152,647,840 - 52,668,017 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13160,138,345 - 160,158,525 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3160,138,345 - 160,158,459 (-)EnsemblpanPan2panpan1.1
SLC43A3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11838,723,146 - 38,745,048 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1838,723,534 - 38,744,636 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1838,268,524 - 38,290,640 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01839,404,270 - 39,426,360 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1839,403,948 - 39,442,057 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11838,986,907 - 39,008,994 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01838,560,424 - 38,582,494 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01839,191,102 - 39,213,228 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Slc43a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494714,948,555 - 14,972,927 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365815,062,448 - 5,086,703 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365815,062,412 - 5,086,733 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC43A3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl213,490,897 - 13,516,120 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1213,490,913 - 13,514,518 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC43A3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1115,810,837 - 15,831,932 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl115,810,938 - 15,831,967 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666038113,156,930 - 113,177,941 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc43a3
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1562,302,572 - 62,322,783 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Slc43a3
151 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:22
Count of miRNA genes:20
Interacting mature miRNAs:22
Transcripts:ENSRNOT00000057622
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300178Hrtrt4Heart rate QTL 43.74heart pumping trait (VT:2000009)heart rate (CMO:0000002)351490129111359995Rat
61377Edpm3Estrogen-dependent pituitary mass QTL 37.050.038pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)373592611110333156Rat
1358293Bw38Body weight QTL 3860.0000031body mass (VT:0001259)body weight (CMO:0000012)374364268119364268Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)373592512136118980Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
1354589Bw31Body weight QTL 313.3body mass (VT:0001259)body weight (CMO:0000012)35365182698651826Rat
2303593Gluco46Glucose level QTL 463blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)34887661993876619Rat
1354590Despr11Despair related QTL 110.000031locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)34887661993876619Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)33540319997383526Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)358601291153936591Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)34790417292904172Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)349872657138829559Rat
1582218Bw74Body weight QTL 743.90.0021body mass (VT:0001259)body weight (CMO:0000012)373592512136118980Rat
1582221Kidm30Kidney mass QTL 303.50.0008kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)385062224136118980Rat
631647Bp122Blood pressure QTL 1226.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)35109256196092561Rat
1582210Bw71Body weight QTL 713.30.0012body mass (VT:0001259)body weight (CMO:0000012)385062224136118980Rat
9590286Uminl1Urine mineral level QTL 13.50.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)34865774493657744Rat
1300111Rf12Renal function QTL 123.78renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)381425008141509147Rat
724523Tsu1Thymus enlargement suppressive QTL 13.84thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)370845569136091483Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
2292613Ept16Estrogen-induced pituitary tumorigenesis QTL 168.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat
738019Anxrr10Anxiety related response QTL 103.9exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)358925062103925062Rat
631841Niddm39Non-insulin dependent diabetes mellitus QTL 393.36blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)370311536115311536Rat
631200Cm25Cardiac mass QTL 254.80.0001heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)381541464126563126Rat
9590136Scort3Serum corticosterone level QTL 323.370.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)34865774493657744Rat
61419Cia11Collagen induced arthritis QTL 115.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)35076614595766145Rat
61356Bp37Blood pressure QTL 373blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)35109256196092561Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)336721849110333156Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)35076614595766145Rat
8694196Abfw2Abdominal fat weight QTL 216.580.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)34865774493657744Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31141509147Rat
1354597Kidm13Kidney mass QTL 132.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)342158111124558371Rat
8552950Pigfal12Plasma insulin-like growth factor 1 level QTL 127.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)34865774493657744Rat
8694386Bw159Body weight QTL 1594.520.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)34865774493657744Rat
1354604Bw36Body weight QTL 362.9body mass (VT:0001259)body weight (CMO:0000012)342158111124558371Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)35675975141509147Rat
1358186Ept2Estrogen-induced pituitary tumorigenesis QTL 28.3pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)367641995130815812Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 66 164 91 90 59 90 59 6 351 189 11 143 79 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000090256   ⟹   ENSRNOP00000071799
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,415,977 - 90,436,976 (+)Ensembl
mRatBN7.2 Ensembl370,009,313 - 70,029,749 (+)Ensembl
Rnor_6.0 Ensembl372,329,967 - 72,351,111 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113415   ⟹   ENSRNOP00000083320
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,415,977 - 90,436,976 (+)Ensembl
mRatBN7.2 Ensembl370,009,313 - 70,029,749 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000115037   ⟹   ENSRNOP00000084517
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,415,977 - 90,436,976 (+)Ensembl
mRatBN7.2 Ensembl370,009,313 - 70,029,749 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000148051   ⟹   ENSRNOP00000104917
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl390,416,282 - 90,436,976 (+)Ensembl
RefSeq Acc Id: NM_001107743   ⟹   NP_001101213
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,970 - 90,436,403 (+)NCBI
mRatBN7.2370,009,313 - 70,029,749 (+)NCBI
Rnor_6.0372,330,031 - 72,350,464 (+)NCBI
Rnor_5.0378,844,067 - 78,866,170 (+)NCBI
RGSC_v3.4368,152,750 - 68,173,186 (+)RGD
Celera369,362,503 - 69,382,667 (+)RGD
Sequence:
RefSeq Acc Id: XM_006234467   ⟹   XP_006234529
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,966 - 90,436,978 (+)NCBI
mRatBN7.2370,009,309 - 70,030,324 (+)NCBI
Rnor_6.0372,330,027 - 72,351,039 (+)NCBI
Rnor_5.0378,844,067 - 78,866,170 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234468   ⟹   XP_006234530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,414,822 - 90,436,978 (+)NCBI
mRatBN7.2370,008,160 - 70,030,324 (+)NCBI
Rnor_6.0372,328,912 - 72,351,039 (+)NCBI
Rnor_5.0378,844,067 - 78,866,170 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006234470   ⟹   XP_006234532
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,868 - 90,436,978 (+)NCBI
mRatBN7.2370,009,210 - 70,030,324 (+)NCBI
Rnor_6.0372,329,961 - 72,351,039 (+)NCBI
Rnor_5.0378,844,067 - 78,866,170 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008761991   ⟹   XP_008760213
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,924 - 90,436,978 (+)NCBI
mRatBN7.2370,009,262 - 70,030,324 (+)NCBI
Rnor_6.0372,329,968 - 72,351,039 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017591713   ⟹   XP_017447202
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,868 - 90,436,978 (+)NCBI
mRatBN7.2370,009,210 - 70,030,324 (+)NCBI
Rnor_6.0372,329,961 - 72,351,039 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039104886   ⟹   XP_038960814
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,867 - 90,433,987 (+)NCBI
mRatBN7.2370,009,210 - 70,027,333 (+)NCBI
RefSeq Acc Id: XM_039104888   ⟹   XP_038960816
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,422,756 - 90,436,978 (+)NCBI
mRatBN7.2370,016,101 - 70,030,324 (+)NCBI
RefSeq Acc Id: XM_063283653   ⟹   XP_063139723
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8390,415,867 - 90,450,654 (+)NCBI
RefSeq Acc Id: NP_001101213   ⟸   NM_001107743
- UniProtKB: A6HMS4 (UniProtKB/TrEMBL),   A0A8I6G8S9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234530   ⟸   XM_006234468
- Peptide Label: isoform X1
- UniProtKB: D4A832 (UniProtKB/TrEMBL),   A0A8I6G8S9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234532   ⟸   XM_006234470
- Peptide Label: isoform X1
- UniProtKB: D4A832 (UniProtKB/TrEMBL),   A0A8I6G8S9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006234529   ⟸   XM_006234467
- Peptide Label: isoform X1
- UniProtKB: D4A832 (UniProtKB/TrEMBL),   A0A8I6G8S9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008760213   ⟸   XM_008761991
- Peptide Label: isoform X1
- UniProtKB: D4A832 (UniProtKB/TrEMBL),   A0A8I6G8S9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017447202   ⟸   XM_017591713
- Peptide Label: isoform X2
- UniProtKB: A0A8I5ZXF0 (UniProtKB/TrEMBL),   A0A8I6G8S9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000071799   ⟸   ENSRNOT00000090256
RefSeq Acc Id: XP_038960814   ⟸   XM_039104886
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038960816   ⟸   XM_039104888
- Peptide Label: isoform X5
Ensembl Acc Id: ENSRNOP00000083320   ⟸   ENSRNOT00000113415
Ensembl Acc Id: ENSRNOP00000084517   ⟸   ENSRNOT00000115037
RefSeq Acc Id: XP_063139723   ⟸   XM_063283653
- Peptide Label: isoform X3
- UniProtKB: A0A8I6G8S9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000104917   ⟸   ENSRNOT00000148051

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A832-F1-model_v2 AlphaFold D4A832 1-499 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13692187
Promoter ID:EPDNEW_R2712
Type:multiple initiation site
Name:Slc43a3_1
Description:solute carrier family 43, member 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0372,329,977 - 72,330,037EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1312016 AgrOrtholog
BioCyc Gene G2FUF-49144 BioCyc
Ensembl Genes ENSRNOG00000061768 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000090256 ENTREZGENE
  ENSRNOT00000090256.3 UniProtKB/TrEMBL
  ENSRNOT00000113415 ENTREZGENE
  ENSRNOT00000113415.2 UniProtKB/TrEMBL
  ENSRNOT00000115037 ENTREZGENE
  ENSRNOT00000115037.2 UniProtKB/TrEMBL
  ENSRNOT00000148051 ENTREZGENE
  ENSRNOT00000148051.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro MFS UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
  SLC43A3 UniProtKB/TrEMBL
KEGG Report rno:311170 UniProtKB/TrEMBL
NCBI Gene 311170 ENTREZGENE
PANTHER PTHR20765 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 43 MEMBER 3 UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/TrEMBL
PhenoGen Slc43a3 PhenoGen
RatGTEx ENSRNOG00000061768 RatGTEx
Superfamily-SCOP MFS_gen_substrate_transporter UniProtKB/TrEMBL
UniProt A0A8I5ZXF0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G8S9 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LPJ3_RAT UniProtKB/TrEMBL
  A6HMS4 ENTREZGENE, UniProtKB/TrEMBL
  D4A832 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Slc43a3  solute carrier family 43, member 3   Slc43a3_predicted  solute carrier family 43, member 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Slc43a3_predicted  solute carrier family 43, member 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED