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Gene: Ccl21 (C-C motif chemokine ligand 21) Rattus norvegicus
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Symbol: Ccl21
Name: C-C motif chemokine ligand 21
RGD ID: 1311996
Description: Predicted to have CCR chemokine receptor binding activity and chemokine activity. Predicted to be involved in several processes, including leukocyte chemotaxis; positive regulation of intracellular signal transduction; and regulation of leukocyte migration. Predicted to localize to extracellular space. Orthologous to human CCL21 (C-C motif chemokine ligand 21); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: C-C motif chemokine 21; Ccl21b; chemokine (C-C motif) ligand 21; chemokine (C-C motif) ligand 21B; chemokine (C-C motif) ligand 21b (serine); LOC298006; MGC105669; small inducible cytokine A21
Orthologs:
Homo sapiens (human) : CCL21 (C-C motif chemokine ligand 21)  HGNC  Alliance
Mus musculus (house mouse) : Ccl21a (chemokine (C-C motif) ligand 21A (serine))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ccl21 (C-C motif chemokine ligand 21)
Pan paniscus (bonobo/pygmy chimpanzee) : CCL21 (C-C motif chemokine ligand 21)
Canis lupus familiaris (dog) : CCL21 (C-C motif chemokine ligand 21)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ccl21 (C-C motif chemokine ligand 21)
Sus scrofa (pig) : CCL21 (C-C motif chemokine ligand 21)
Heterocephalus glaber (naked mole-rat) : Ccl21 (C-C motif chemokine ligand 21)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0558,197,678 - 58,198,782 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl558,197,680 - 58,198,782 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0562,722,614 - 62,723,718 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4559,238,897 - 59,240,001 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1559,239,077 - 59,240,180 (-)NCBI
Celera555,572,689 - 55,573,793 (-)NCBICelera
Cytogenetic Map5q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ccl21
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311996
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-09-01
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.