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Gene: Tmcc2 (transmembrane and coiled-coil domain family 2) Rattus norvegicus
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Symbol: Tmcc2
Name: transmembrane and coiled-coil domain family 2
RGD ID: 1311960
Description: Predicted to be involved in amyloid precursor protein metabolic process. Predicted to localize to endoplasmic reticulum. Orthologous to human TMCC2 (transmembrane and coiled-coil domain family 2); INTERACTS WITH 1,2-dimethylhydrazine; 3,7-dihydropurine-6-thione; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC305095; RGD1311960; similar to RIKEN cDNA 1110063G11; transmembrane and coiled-coil domains 2; transmembrane and coiled-coil domains protein 2
Orthologs:
Homo sapiens (human) : TMCC2 (transmembrane and coiled-coil domain family 2)  HGNC  Alliance
Mus musculus (house mouse) : Tmcc2 (transmembrane and coiled-coil domains 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tmcc2 (transmembrane and coiled-coil domain family 2)
Pan paniscus (bonobo/pygmy chimpanzee) : TMCC2 (transmembrane and coiled-coil domain family 2)
Canis lupus familiaris (dog) : TMCC2 (transmembrane and coiled-coil domain family 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tmcc2 (transmembrane and coiled-coil domain family 2)
Sus scrofa (pig) : TMCC2 (transmembrane and coiled-coil domain family 2)
Chlorocebus sabaeus (African green monkey) : TMCC2 (transmembrane and coiled-coil domain family 2)
Heterocephalus glaber (naked mole-rat) : Tmcc2 (transmembrane and coiled-coil domain family 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01349,132,685 - 49,169,771 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1349,132,667 - 49,169,918 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01354,201,418 - 54,238,775 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41345,246,328 - 45,283,883 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11345,261,566 - 45,297,926 (-)NCBI
Celera1344,128,734 - 44,166,110 (-)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tmcc2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311960
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.