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Gene: Aff4 (ALF transcription elongation factor 4) Rattus norvegicus

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Symbol:

Aff4

Name:

ALF transcription elongation factor 4

RGD ID:

1311694

Description:

Involved in response to endoplasmic reticulum stress. Predicted to be located in euchromatin; fibrillar center; and nuclear body. Predicted to be part of super elongation complex. Orthologous to human AFF4 (ALF transcription elongation factor 4); PARTICIPATES IN RNA polymerase II transcription elongation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

AF4/FMR2 family member 4; AF4/FMR2 family, member 4; Laf4l; LOC303132; lymphoid nuclear protein related to AF4-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AFF4 (ALF transcription elongation factor 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Aff4 (AF4/FMR2 family, member 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Aff4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AFF4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AFF4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Aff4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AFF4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AFF4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Aff4 (ALF transcription elongation factor 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	MRM1 (mitochondrial rRNA methyltransferase 1)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Aff4 (AF4/FMR2 family, member 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	AFF4 (ALF transcription elongation factor 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	aff4 (AF4/FMR2 family, member 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	lilli	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	aff4	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	kcnab2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	37,998,319 - 38,080,580 (+)	NCBI		GRCr8
mRatBN7.2	10	37,498,825 - 37,579,751 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	37,498,825 - 37,579,751 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	42,191,881 - 42,272,554 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	41,681,915 - 41,762,603 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	37,185,635 - 37,266,323 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	38,692,167 - 38,773,021 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	38,692,211 - 38,773,021 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	38,473,786 - 38,555,300 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	38,798,873 - 38,883,154 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	38,805,468 - 38,883,565 (+)	NCBI
Celera	10	36,846,104 - 36,927,272 (+)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Lung Injury (IEP)

autism spectrum disorder (ISO)

bone development disease (ISO)

CHOPS Syndrome (ISO)

cognitive disorder (ISO)

colorectal cancer (ISO)

congenital heart disease (ISO)

dilated cardiomyopathy (ISO)

Facies (ISO)

familial adenomatous polyposis 1 (ISO)

genetic disease (ISO)

Growth Disorders (ISO)

Hereditary Neoplastic Syndromes (ISO)

lung disease (ISO)

Multiple Abnormalities (ISO)

Neurodevelopmental Disorders (ISO)

obesity (ISO)

skin melanoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

1-nitropyrene (ISO)

17beta-estradiol (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,4-methylenedioxymethamphetamine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

alpha-pinene (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

bortezomib (ISO)

C60 fullerene (EXP)

caffeine (ISO)

CGP 52608 (ISO)

chloroprene (EXP)

cobalt dichloride (ISO)

cocaine (EXP)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

coumestrol (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

DDE (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

dimethylarsinous acid (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (ISO)

Enterolactone (ISO)

ethyl methanesulfonate (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

geldanamycin (ISO)

gentamycin (EXP)

geraniol (ISO)

hydrogen peroxide (ISO)

indometacin (ISO)

lead(0) (ISO)

leflunomide (ISO)

mercury dichloride (ISO)

methapyrilene (EXP)

methidathion (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

oxaliplatin (EXP)

ozone (ISO)

paracetamol (EXP,ISO)

parathion (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

resveratrol (EXP,ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

Soman (EXP)

theophylline (ISO)

thimerosal (ISO)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

topotecan (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

troglitazone (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

vorinostat (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of gene expression (IBA,IEA)

response to endoplasmic reticulum stress (IEP)

spermatid development (IEA,ISO)

Cellular Component

euchromatin (IEA,ISO)

fibrillar center (IEA,ISO)

nuclear body (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

super elongation complex (IBA)

transcription elongation factor complex (IEA,ISO)

Molecular Function

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

RNA polymerase II transcription elongation pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	AFF4 Predicts the Prognosis of Colorectal Cancer Patients and Suppresses Colorectal Cancer Metastasis via Promoting CDH1 Expression.	Fang Y, etal., Front Oncol. 2022 Feb 9;12:797392. doi: 10.3389/fonc.2022.797392. eCollection 2022.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	AFF4 facilitates melanoma cell progression by regulating c-Jun activity.	Hu H, etal., Exp Cell Res. 2021 Feb 15;399(2):112445. doi: 10.1016/j.yexcr.2020.112445. Epub 2021 Jan 5.
4.	Genipin attenuates mitochondrial-dependent apoptosis, endoplasmic reticulum stress, and inflammation via the PI3K/AKT pathway in acute lung injury.	Luo X, etal., Int Immunopharmacol. 2019 Nov;76:105842. doi: 10.1016/j.intimp.2019.105842. Epub 2019 Aug 26.
5.	The super elongation complex (SEC) family in transcriptional control.	Luo Z, etal., Nat Rev Mol Cell Biol. 2012 Sep;13(9):543-7. doi: 10.1038/nrm3417. Epub 2012 Aug 16.
6.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:16024815	PMID:22195968

Genomics

Comparative Map Data

Aff4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	37,998,319 - 38,080,580 (+)	NCBI		GRCr8
mRatBN7.2	10	37,498,825 - 37,579,751 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	37,498,825 - 37,579,751 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	42,191,881 - 42,272,554 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	41,681,915 - 41,762,603 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	37,185,635 - 37,266,323 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	38,692,167 - 38,773,021 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	38,692,211 - 38,773,021 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	38,473,786 - 38,555,300 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	38,798,873 - 38,883,154 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	38,805,468 - 38,883,565 (+)	NCBI
Celera	10	36,846,104 - 36,927,272 (+)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

AFF4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	132,875,395 - 132,963,634 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	132,875,395 - 132,963,634 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	132,211,087 - 132,299,326 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	132,238,970 - 132,327,253 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	5	128,341,097 - 128,429,374 (-)	NCBI		Celera
Cytogenetic Map	5	q31.1	NCBI
HuRef	5	127,403,706 - 127,491,391 (-)	NCBI		HuRef
CHM1_1	5	131,644,358 - 131,732,653 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	133,395,153 - 133,483,382 (-)	NCBI		T2T-CHM13v2.0

Aff4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	53,240,807 - 53,312,657 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	53,241,660 - 53,312,657 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	53,350,640 - 53,421,830 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	53,350,833 - 53,421,830 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	53,164,269 - 53,235,332 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	53,194,256 - 53,265,263 (+)	NCBI		MGSCv36	mm8
Celera	11	57,930,485 - 58,001,550 (+)	NCBI		Celera
Cytogenetic Map	11	B1.3	NCBI
cM Map	11	31.93	NCBI

Aff4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	4,248,563 - 4,305,194 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	4,247,730 - 4,305,194 (-)	NCBI	ChiLan1.0	ChiLan1.0

AFF4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	128,187,965 - 128,270,350 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	126,327,517 - 126,409,615 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	128,292,700 - 128,374,511 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	134,451,740 - 134,532,517 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	134,457,398 - 134,532,625 (-)	Ensembl	panpan1.1		panPan2

AFF4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	21,157,790 - 21,218,750 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	21,163,398 - 21,218,190 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	19,960,642 - 20,053,417 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	21,945,075 - 22,033,184 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	21,947,331 - 22,033,241 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	20,663,430 - 20,751,443 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	20,511,144 - 20,599,256 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	21,153,663 - 21,241,674 (-)	NCBI		UU_Cfam_GSD_1.0

Aff4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	115,239,719 - 115,339,647 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936647	2,242,319 - 2,336,532 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936647	2,242,476 - 2,342,409 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AFF4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	135,200,076 - 135,283,675 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	135,196,067 - 135,283,931 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	140,668,525 - 140,696,941 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AFF4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	35,693,427 - 35,782,746 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	35,699,094 - 35,782,683 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	42,158,934 - 42,249,046 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aff4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	39,123,575 - 39,221,424 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	39,126,483 - 39,226,969 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Aff4
288 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	899
Count of miRNA genes:	325
Interacting mature miRNAs:	453
Transcripts:	ENSRNOT00000009440
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61441	Btemp1	Thermal response to stress QTL 1	4		body temperature trait (VT:0005535)	core body temperature (CMO:0001036)	10	35392457	63642539	Rat
9589136	Insul27	Insulin level QTL 27	10.46	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	10	11474010	56474010	Rat
152025229	Scl83	Serum cholesterol level QTL 83	4.33		blood cholesterol amount (VT:0000180)		10	35710580	68663659	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	10	31297439	76297439	Rat
631564	Apr3	Acute phase response QTL 3	3.9		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	10	15275955	60275955	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	26521957	98003205	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	743364	63851208	Rat
631557	Bp136	Blood pressure QTL 136		0.003	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	30632053	75632053	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
1578761	Stresp21	Stress response QTL 21	3.3		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	6375746	51375746	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	5801990	62146030	Rat
61332	Eau3	Experimental allergic uveoretinitis QTL 3		0.004	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	34490559	45579777	Rat
10401803	Kidm50	Kidney mass QTL 50			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	10	418344	45418344	Rat
1554317	Bmd4	Bone mineral density QTL 4	9.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	19816042	99406971	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	10	18167841	63167841	Rat
1581497	Esta1	Estrogen-induced thymic atrophy QTL 1			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	21329805	61345413	Rat
2313095	Bss62	Bone structure and strength QTL 62	1.5	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	10	5387014	50387014	Rat
724527	Bp148	Blood pressure QTL 148		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	28453136	73453136	Rat
1358897	Stresp6	Stress response QTL 6	4.17	0.022	blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	35392267	64155584	Rat
1331762	Rf40	Renal function QTL 40	3.873		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	10	29299504	64155584	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	26944628	71944628	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14487011	89062041	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		0.003	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	9658275	104670812	Rat
2313104	Bss61	Bone structure and strength QTL 61	0.9	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	10	5387014	50387014	Rat
9590310	Scort19	Serum corticosterone level QTL 19	6.3	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	11474010	56474010	Rat
10402859	Bp381	Blood pressure QTL 381		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	27606468	72606468	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14487011	107057807	Rat
6893352	Bw100	Body weight QTL 100	0.33	0.6	body mass (VT:0001259)	body weight (CMO:0000012)	1	15906665	60906665	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22427500	90627625	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6154182	73453136	Rat
2313066	Bss63	Bone structure and strength QTL 63	1.4	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	10	5387014	50387014	Rat
2313064	Bmd71	Bone mineral density QTL 71	0.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	10	5387014	50387014	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1	80676123	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15028513	60430477	Rat
6893350	Bw99	Body weight QTL 99	0.87	0.16	body mass (VT:0001259)	body weight (CMO:0000012)	1	15906665	60906665	Rat
2317043	Aia7	Adjuvant induced arthritis QTL 7	3.82		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	10	37565079	82565079	Rat
70224	Eae3	Experimental allergic encephalomyelitis QTL 3	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	26521957	61345413	Rat
2317042	Aia20	Adjuvant induced arthritis QTL 20	3.38		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	10	37565079	82565079	Rat
2313081	Bss64	Bone structure and strength QTL 64	1.3	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	10	5387014	50387014	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29299504	107211142	Rat
2313087	Bmd80	Bone mineral density QTL 80	3.2	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	10	19606483	64606483	Rat
634327	Hc4	Hypercalciuria QTL 4	2.4		urine calcium amount (VT:0002985)	urine calcium excretion rate (CMO:0000763)	10	1	38328221	Rat
1354614	Hpcl1	Hepatic cholesterol level QTL 1	3.3		liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	35392267	51793994	Rat
631532	Cm50	Cardiac mass QTL 50	6.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	17907113	51786432	Rat
1576319	Cia29	Collagen induced arthritis QTL 29			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	33973921	78973921	Rat
7411611	Foco17	Food consumption QTL 17	18.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	1	42315980	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23444813	104060283	Rat
1600371	Mcs21	Mammary carcinoma susceptibility QTL 21	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	10	28875650	52200160	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14487011	104060283	Rat
9590268	Scort13	Serum corticosterone level QTL 13	3.26	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	11474010	56474010	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	31224026	75632053	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6357896	96121100	Rat
2292441	Bp308	Blood pressure QTL 308			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	27606468	72606468	Rat
2313055	Bw96	Body weight QTL 96	3.6	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	10	19606483	64606483	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	26521957	98952741	Rat

Markers in Region

SGC32016

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	37,578,868 - 37,579,002 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	38,772,139 - 38,772,272	NCBI	Rnor6.0
Rnor_5.0	10	38,554,418 - 38,554,551	UniSTS	Rnor5.0
RGSC_v3.4	10	38,882,272 - 38,882,405	UniSTS	RGSC3.4
Celera	10	36,926,390 - 36,926,523	UniSTS
Cytogenetic Map	10	q22	UniSTS

RH142595

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	37,573,390 - 37,573,508 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	38,766,661 - 38,766,778	NCBI	Rnor6.0
Rnor_5.0	10	38,548,940 - 38,549,057	UniSTS	Rnor5.0
RGSC_v3.4	10	38,876,794 - 38,876,911	UniSTS	RGSC3.4
Celera	10	36,920,911 - 36,921,028	UniSTS
RH 3.4 Map	10	402.5	UniSTS
Cytogenetic Map	10	q22	UniSTS

AU047273

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	37,569,393 - 37,569,548 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	38,762,662 - 38,762,818	NCBI	Rnor6.0
Rnor_5.0	10	38,544,557 - 38,544,713	UniSTS	Rnor5.0
RGSC_v3.4	10	38,872,795 - 38,872,951	UniSTS	RGSC3.4
Celera	10	36,916,912 - 36,917,068	UniSTS
Cytogenetic Map	10	q22	UniSTS

stSG601610

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	37,552,129 - 37,553,740 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	38,745,401 - 38,747,011	NCBI	Rnor6.0
Rnor_5.0	10	38,527,155 - 38,528,765	UniSTS	Rnor5.0
RGSC_v3.4	10	38,854,988 - 38,856,598	UniSTS	RGSC3.4
Celera	10	36,899,569 - 36,901,181	UniSTS
Cytogenetic Map	10	q22	UniSTS

MARC_16763-16764:1020874272:1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	10	38,024,346 - 38,024,841 (+)	Marker Load Pipeline
mRatBN7.2	10	37,523,517 - 37,524,011 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	38,716,720 - 38,717,213	NCBI	Rnor6.0
Rnor_5.0	10	38,498,582 - 38,499,075	UniSTS	Rnor5.0
RGSC_v3.4	10	38,824,744 - 38,825,237	UniSTS	RGSC3.4
Celera	10	36,870,605 - 36,871,098	UniSTS
Cytogenetic Map	10	q22	UniSTS

REN72054

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	37,578,697 - 37,578,929 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	38,771,968 - 38,772,199	NCBI	Rnor6.0
Rnor_5.0	10	38,554,247 - 38,554,478	UniSTS	Rnor5.0
RGSC_v3.4	10	38,882,101 - 38,882,332	UniSTS	RGSC3.4
Celera	10	36,926,219 - 36,926,450	UniSTS
Cytogenetic Map	10	q22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246263	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009440 ⟹ ENSRNOP00000009440

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	37,498,825 - 37,579,751 (+)	Ensembl
Rnor_6.0 Ensembl	10	38,692,211 - 38,773,021 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114150 ⟹ ENSRNOP00000088228

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	37,498,825 - 37,579,751 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117466 ⟹ ENSRNOP00000086504

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	10	37,498,825 - 37,579,751 (+)	Ensembl

RefSeq Acc Id:

NM_001107001 ⟹ NP_001100471

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	37,999,654 - 38,080,580 (+)	NCBI
mRatBN7.2	10	37,498,825 - 37,579,751 (+)	NCBI
Rnor_6.0	10	38,692,211 - 38,773,021 (+)	NCBI
Rnor_5.0	10	38,473,786 - 38,555,300 (+)	NCBI
RGSC_v3.4	10	38,798,873 - 38,883,154 (+)	RGD
Celera	10	36,846,104 - 36,927,272 (+)	RGD

Sequence:

show sequence

GGACGGGGCGGGGATCTCGGTGCCAGGGCCCCGTCAGCCCGCCCCCGCCACCGCCTCAGTCAGC
CGTCCGGGGCTCGGCCGGGCCGTCATGGAGCGGGGCGGAACCATGGCGTCCGCCGTGTGAAGTG
CGCCGCCTCGGCTCCCCTTGGCCTCCGGATCCGCCGCTGCCCCTTGCCCTAGGCAGCCGGTCGC
CGCCTCCTGGGCGGGCCCGAATGCGCGTCCGGTGAAGGTGCACGCCGGGCGCCGCCGCCGCCGC
CGCCACAGCCGCGGTCGGGAGATGGTTCGGGCCTAGCGGAGCGGGGACTGGAGCAACATGAACC
GTGAAGACCGGAATGTGCTGCGCATGAAAGAAAGGGAAAGGCGGAATCAGGAAATTCAGCAGGG
TGAAGACGCCTTCCCACCTAGTTCTCCTCTCTTTGCTGAGCCGTACAAAGTTACTAGCAAAGAA
GATAAGTTATCAAGTCGTATTCAGAGTATGCTTGGAAACTACGATGAAATGAAGGATTACATAG
GAGACAGATCTATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCGACGACAACAGACGA
GAAAGCAAACCCAAATTTTTTTGAACAGAGACATGGAGGATCTCATCAGAGTAGCAAGTGGACT
CCTGTAGGACCTGCACCCAGCACCTCTCAGTCTCAGAAGCGCTCCTCTGGCTTGCAGAGTGGAC
ACAGTAGCCAGCGGAGCAGTGCAGGTGGGAGTGGCGCTAGTGGTAGTGGCCAGAGGCATGACCG
TGACTCCTACAGCAGTAGCAGGAAAAAAGGCCAGCACGGGTCAGAGCACTCCAAATCACGATCC
TCAAGCCCTGGAAAACCCCAGGCTGTTTCTTCACTAAGTTCTAGTCATTCCAGGTCTCATGGGA
ATGACCACCATAGCAAGGAACATCAGCGCTCCAAATCACCTCGGGACCCTGATGCCAACTGGGA
TTCTCCTTCCCGGGTACCTTTTTCAAGTGGGCAACATTCAAGTCAGTCTTTCCCACCTTCTTTG
ATGTCAAAATCTAGTTCAATGTTACAGAAACCCACTGCCTATGTACGGCCCATGGATGGACAGG
AGTCTGTGGAACCAAAGCTGTCCTCTGAGCACTACAGCAGCCAGTCTCATGGTAGTAACATGAC
TGAGCTGAAGCCCAGCAGCAAAGCACATCTTACCAAGCTGAAAATACCTTCCCGACCTCTGGAT
GCATCAGTTTCTGGTGATGTAAGCTGTGTGGATGAAATACTTAAAGAGATGACGCACTCATGGC
CTCCCCCTCTAACGGCTATTCATACACCATGCAAAACAGAACCTTCCAAATTTCCTTTTCCAAC
TAAGGAGTCTCAGCAGTCTAACTTTGGCTCTGGAGAACAAAAAAGATACAGTACTTCTGCTAAA
ACATCAAATGGACACCAGTCAAAATCTATGTTAAAAGATGACTTAAAACTAAGCAGCAGTGAAG
ACAGTGATGGGGAACAGGATTGTGATAAGACAATGCCAAGGAGTACACCAGGAAGTGAGGGAGC
AGATAACTCCAGGGATGACTCAAGCAGCCACAGTGGGTCTGAAAGCAGCTCTGGGTCCGACTCC
GAGAGTGAAAGCAGCTCCAGTGACAGTGAGGCAAATGAGCCATCCCAGAGCGCATCCCCTGAGC
CTGAACCACCACCAACCAACAAGTGGCAACTTGATAATTGGTTGAACAAAGTGAACCCACATAA
AGTGTCCCCAGCTTCCTCTGTAGATAGCAACATCCCATCGTCTCAAGCCTACAAGAAAGAAGGC
CGAGAGCAGGGCACTGCCAGTAACTACACAGATCCAGGTGGGGCCAAAGAAGCGAGCTCTGCCA
CTCCGGGACGAGACTCTAAAACTATCCAAAAAGGATCAGAAAGTGGCCGTGGGAGGCAGAAGTC
TCCTGCACAGAGTGACAGTACCACACAGAGGAGAACTGTTGGCAAAAAACAACCCAAAAAAACT
GAGAAGTCAGCTGCTGAAGAGCCCCGAGGAGGCCTGAAGATAGAAAGTGAGACCCCTGTGGACA
TGGCTACCAGCATGCCCTCCAGCAGGCATAAGGCAGCCACCAAGGGCTCAAGGAAACCTAACAT
CAAAAAGGAGTCGAAATCTTCCCCTCGACCTACAGCAGAGAAAAAGAAATACAAGTCAGCAAGT
AAATCCTCCCAGAAATCTCGGGAAATCATAGAAACAGATAGCTCCTCCTCAGATTCAGATGAGA
GGGAGAGCCTCCCTCCCTCCTCCCAGACTCCTAAGTACCCTGAGAGCAATAGGACTCCTGTCAA
ACCCTCCTCGGCGGAGGAAGACGATAGCTTTTTCCGGCAGCGGATGTTCTCTCCTATGGAAGAG
AAGGAGCTCCTTTCCCCACTCAGTGACCCTGATGACAGGTACCCACTCATTGTGAAGATAGACC
TGAATCTTTTGACTAGAATACCCGGGAAGCCTTACAAAGAAACAGAGCCACCCAAGGGGGAAAA
GAAAAATGTTCCAGAAAAACACTCAAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAAC
AAAGGCAAGAGGAAACACAAGAATGATGATGATAACCGAGCCAGTGAGAGCAAAAAACCCAAGA
CGGAGGACAAGAACTCATCAGCCCACAAGCCATCCAGCAGCAAAGAGTCATCGAAGCAGAGTAG
TACAAAAGAAAAGGACTTGCTACCTTCACCTGCTGGGCCTGTTCCTTCAAAAGATTCAAAAACA
GAGCATGGCTCTCGGAAGAGGACTGTCAGTCAGTCATCATCCTTAAAGTCCAGCAGTACCAGCA
ACAAAGAGAACAGTGGCAGCAGCAAGAGCACTTCCTCCACAGCAAAACAGAAGAAGACTGAAGG
GAAGGTTTCCAGCAGCTCCAAAGAGGCCAAGGAGAAGGCTCCAAATAGCTCCTCTAATTGTCCT
CCGTCTACACCAACTCCTGATTCTTCGAAGCCTCGAAGAACGAAGCTCGCCTTTGATGACAGAA
ATTATTCAGCAGACCATTATTTACAAGAAGCAAAAAAACTCAAACACAATGCAGATGCTTTGTC
TGATAGGTTTGAGAAAGCTGTGTACTACCTTGATGCCGTAGTGTCTTTCATTGAATGTGGGAAT
GCATTAGAGAAGAACGCTCAGGAATCCAAGTCTCCATTCCCTATGTACTCAGACACAGTGGAGC
TTATTAAATACACTATGAAACTAAAGAATTATTTGGCGCCAGATGCTACAGCTGCAGACAAGAG
ACTCACAGTACTTTGCCTGAGATGCCAGTCATTGTTGTACCTGAGGCTGTTCAAACTGAAGAAG
GAGAACGCTCTGAAGTACTCCAAGACGCTGACTGAGCACCTGAAGAATTCTTACAGTAATTCTC
AAGCACCTTCACCTGGCTTGGGGAGCAAAGCTGTTGGGATGCCCTCCCCTGTTTCTCCAAAGCT
GTCACCAGGCAATTCTGGAAGTTACTCTTCTGGGGGAAGTAGTGCTTCAGCAAGTGGTTCTTCG
GTGACCATTCCACAGAAAATCCACCAGATGGCAGCAAGCTATGTCCAGGTTACATCTAACTTCC
TCTATGCCACAGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAACAAAAAGAATTCTTTGC
TGAACTGGACAAAGTGATGGGCCCTCTCATCTTTAATGCAAGCATCATGACAGATCTGGCTCGT
TACACCCGGCAGGGACTGCATTGGCTTCGGCAGGATGCCAAGCTGATATCTTGAACTGAACATA
CTCTCGTTGCCTCTGATTTTTTCCACAACACTGTGTCCCATCACAAAGGAAAACTGCCATGACA
CACACCTAGTCGACACTAAGAATGAGGACTGGTTCTCTCCTCTGGTTCATGTTGTTGTTTCTAT
AGCCCAAAGCCATCTAATCAATTGACCCTTTCAATATTTCTAATGTGACTAGTATTTAAATGTT
CTAAACATGCAGTACATCACAAGATGGTTTTAGTAATTGGAATTCCAGTTGCAATTCATAAATA
ATCAAGTAAAATTCTATTTATTTTCATTTTTCAAGTTCCCAGATTGGAGCTTGTTTAAAGCTTA
GTATTTCTGCCTATAAATTTATTCTGTTGAATATTTAGCATAAATTTAATGTAAGCATTTTATT
TATATATTTTGGGAGCTGTGTTACTTAATGTCTTCTAAGATAAGAGTTGGCTTGTCCAAGACAG
GACTTGTTCTTTCTACAGCTACTCACCTGTGTTCTTTTAAGTCTTACTACAGTTCCACTATTGT
AGGGTTTATGCTTGATATTGAGGATGCTCTTCACATGTGAAAAGTCATTTAAGCATGAGGAGAT
GGCATTCTACATGGGTGCAGAGATGGGGTGGGTCTGGTTTGGTATGCATTATTTCGAAACTGTG
AATGTGTGTTGGTAACACTAGCACTCACAAGGTGACTACATTGCATCTAATGCATTACAGAAAG
CAGATTGCTAGGGAGGCACGTGATGCTGCATGGCTCCTAAAGGACAATCTTAAACTATGAGCTC
ATTAAACCTTCTATTCCTTTTTGTTTTACTCATTTGACACTTCACTGAAACAGAGTAAGTTACT
CCTAAAAACAGTGGCCCAGTTTCTGAAGGCTGCAGCCTGTATTCATTGATAATGTCTGCAGATT
TCCCCTATGGTGGAGAGATTGTGATGCTCAGATATGACAGTGCAGTAGTAACTGGAGCTGAAAG
GAGGTGTCCCAGTGTTTTAATGTGGAGATAATGAATTTCGCTTTCCAAAGATCCTCATCAACGA
TGGACACTTTTGACAGGATTGTAAAACTCACAGTAGCAGCTGGGCATGGTTGTGCATGTCTGTA
ATCCCAGCACTGGGAAGTGATGACAGGAGGGTCAGGAGGTCAGGGTCATCCTCAAGCTACATAA
AGCTAGACAGTGAGTTTGGGGCTAGCCTGAGCTACATGATCCCTCGTCACATTAAAGAAAGAAA
GAAAATATACTAGAAAAATATGTAACTTAGCTCAATATGAGCTTTCTTGGAAAGGGGGAAGTAA
TAGGGATAGTGCTTAGGAAGCCAGCTCTGTAACAATTCCTTATCAAACTACTGTTCCCGACAAG
GTGCGTATAGCAGGGAAGGGCAAGGAATGTCTCTCTTCCTCTATACTTCTTTTTAGTGACCCCC
GTCATGTCTGGTGTGCCTTAAATCTTAACTTTAAATGATAACTCTATGGATTGTTTACAGATAA
AGTTTTATGCTGGGACCAGATTAGCCATGCATGGTTGGTCCTCTACAATAATAATTTCAAATTC
TCTTTGATTTTAAATCTTCCTTTAGAGACACATTAAAATAGATTCCTTCAGAAAAGCTAGTACT
TTGATATCTGACTTAGTGTAATCAATTGGGTATAATGCTGCTTCAAAAATGGCTTTTCCTTCTC
ATTCCAAAAATTCATCCAATTAGGGAAAAGTTCCCTCTTAATAGCAGTTGATTATTGAGACTTG
AATGGAACAGGGGAAAGAGGGCTAGAAATCTTCCCTGCTCCCCTTCACTGCCTGCTCCTGAAGA
TAGTGAGCTTTGGCCTGCAGTCTCATAGTTACAGAGCTTAACTGCTTTGTGTCTCATTGTTTTT
ACATAGTGTTGAGGGTTGATATCTACAGCTTATGCTGAATTTAACACTTTTCCCTTGAAGAAAT
TGCCTCTGTACCTTTCTAGTTTAATCATAGTGTATTTAAGGAATACTTCTTCAGAGGCCGTTGT
TTCCTCTCGTGCTAGTAACCTCCGTGGTCTAACAGTTGTGTGTCCTGTCCTTGCCTCTTCTCTC
TCATGCTGGCTCCTTAATTTCAGGGAGGTCTTAGAAGTAGAACAAGCGCCCTCTATGCTTTCAG
CCTTCAGCAGCTGCAGTGCTGGGGCTCTGCTTTCCAGCTCTGGTCTGTGTGCAGCACACTCTAG
AGTGGCTCTGACTCGTGTTAAAGCAGAGTTTCCTACATGTTTATGGTGCTGCTTTAAGATGTTT
TCTCTTTAAAACTGTCAATTCTTGGAGAATGAAACTGTTAAACCTTTCATTGTGGAGGATTTTC
CTCACCAGGTAGAAATGGGCAATGGATCAAAATCCGATCCTAAGTGATTTGATGTCATAGTGTG
TGAGACTATACACTCTTTGTGTCTCTTCTCAGATGTTTTGTCTCAGTCTTGTTCAGCACATACC
TTACTCCCTTTACAAGTGATCACTCCCCCCTCTCAGTAGGCACCCTTGGTGTGTTTTAGCCATT
GAAAGATGATTTGACAAGTGGCTACAAACCTAGTCTGAAGCTTGCACTCACTGTGTAGTTAGGG
ATAGAAATAGCAGCTGTCATTAATACTCAGTTCACTGCTCTGAAGATCACATTTCTGTGCCAGG
AGGCAGCAGCATGCACCATTGGACTCTGGGCAGGCATCTCACACCTGTCACAGTGGTCCTGCCT
GGGAGAGGCTGGGCTATGGGGAGCACTCCCCTCCAGGCATTCAAGATTACACAGCCTAGCCCAT
GTCCCATTCTGGCTGGAGAGCACCCAGCCCTTTCCTTGCTCAGTGACACATTTTTTCTGGGCAA
AAAGCTATGAAGTCACTTTATTACCAGTAAGTGCTTCAAATAAAGTCACAGATATAGCCGCTAA
AGGGAGAAGATTGACCACTACTGACTTAATTCTCCACTATAAAAGCAGTTCAGAGTCGGGTGTA
CATGCGTCCACATTGCTGCTGTTGCTGCTGTTGGTTTTTTCTGGGAAGCTCTTACACTAGGGAT
TTATAGGCATCTGGGCTGCACTTTGAATGACACACTTGTGGCTTTAGAGTCGCTGTTGTTCTTT
TGTTTTAAAATTGTTCTTCGTTTCTTTTCATTAAAGGTTTAATCAGCTAGATTAGAGAGCATCA
TTTGTATTTAACAGCTGAAACTTCGGTACGTTGCCGTTTAATGAATGAACTTGCATTGTGTAGC
CAGGGCCTACAAAGGCTCTTGTCAGGAATACAAGCACTGCCTGGGGCTGGTGCTCAGAGGAGTT
TTCAGTGCAACCAGTAATAGCTCCATTGGGTGATGCCTAGCTCAGTTGAGAAGGGGGATGCTGT
ACACTTCTAGGTATGAGGGTATGCGACTTTGGATCTTAAAATTATGTACACATACACACTTTAT
ATATATGTACGTATGTATGTATGAAAACATGGAATTAGTTTGTCAAAATGTGTGTGTTTAGTAT
TTTAGCTTAGTGCAACTATTTCCACATTATTTATTAAATTGATCTAAGACACTTTGTTCTTGGC
ACCTTGAATATTAACATTCAAGGATGCAATGTGTATTCCTTTAGATTGTTAAAGCTTAATTACT
ATGATTTGTAGTAAATTAACTTTTGAAATCTATTTGAGCCCTTCTGTAGTATAATAGGGCTCTT
ACAGGGTGGGAAAGATTTTAATTTTCCAATAGCTAATTGAACAAAATGGCTTCATTGTATATTT
TGATTTATAGGAGTCTGTAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGG
TGGGTGGAATGGTGTTTAGACTATACCTAAGTGACTTGGAAAGCCAGAGCACCTTGTTCAAATC
CAGACTCCTGTAACTCCTATTCTTCCAGGATGTGGAACACAAATCCCGCCCAGCTTCACATTTC
AATTAGAGAGGCAGACTTCTTTTCCAGTAATATTGTACACCTAGTGTTGCTATGAGTGAAATCA
GTAGGAAAAAGTACTGAATGAGGGTCTGGGACGATGCACTGACCTGGCCAGCTGTCACACCTGT
AAATGTACCTTTCCCATGCCTACCAGTGGAGGCATTCAGACCAGAAAAGCAAGCCAGCAAGTAA
CATTCTTAAGGTTAGAGAAAGCCAGTTGTGCTGCTGCATACCCTGAGACAAAGAGCATCCTTTG
CCAGATAGAGAGCCTGAGACACCAGGCCACTCTCCACAAACTAGATACATTTAAAAGTTACTCG
GTCAACCAGGTGTGGTAGTGCATGCTTTAGTTCTAGTGCTTGGACTGGCAGCTCGAGACCAGCA
TGCACCACCCAGACGTCTCCCTGTGAGAAGAGCAAAGTGGAGTAAGAGGATGCTGGCCTGCAGA
ACTGTTTACATGACCCCTTGGTTGATGAAAAAGAACCTGCCGTTTGCAGACCCAGGGGACAGAA
AAGAAGCTACGCTTGCCTTGTGAATGGCGTTTAGAACAAGGTGTTCAGGTGAAGTCTCAGTAGC
CAGAGGTTTCAGCAGCTTCAATTGCTAACATTTAAGAAGTTGATTTTCAGGAATGTCTGCATGC
GCCTCTCCTTGCTGTCATTGATCAGCTCAGCAGAATCATCATCCTTAAATATGGAGAAAGCTCT
CAGATGAACGTGGACAAGCTCCTACCCAGAAACCCTAACCATACTTGGTTTTGACTGTGCTGCT
TCTGTGTGAGGTTTCTTCTCAGCTTTTAGCCACTGGGGTTTTCTGCCTGTTCTGTACCTCTCTG
GAAGATGTCGATTTGGAAGTGCTGCCTTTCAAACCAGTGCCACAGCGTCCGTATGGTTGAGCTT
GTCGCTGATTCAGAGGTGTCCCCATTATGCTCACACCTGGCACATCACTGATGTGAGCATTTGA
CAGTACGTGGGCGAGGGTAGGGGTGGCGCTAGCCAACAGCGCTGGCTTAATTGGCAGGGCCTGC
AAAGGCCCCACTTGAGGGCCAGACACTAGGTTGGTTAAGCACAGTTAGGGAAATTTCTACCTAG
CCTCCGTTTTGAATGACTCTGAGAAATTTTATATATGGAGGATGGAAATGCGTATATATTTATT
GAAGATCTTTTTATTTGAAATTAAAATCCTTTGGTAAATAATGGTTTGATATTTGGGGAGGGTT
TTGGAGGGGAAGTAACACAGTTGATAAAGTACAGGCCTGGTGACTCTTCTGAAAGGCTCTGTTG
CTGGTAGGAGAGGCCTTTATCTTGTACATGATCCAAGCGTTGTCTTATGTTTCTTTTATCCAAA
ATATCTAGGCATCTGACACTTTGAACCAAAATTTCAATTGTATACTGTGATTTTTATTTGTTGC
AATATGTTAAATTTCAGAGGTACTTTGGGGCTCAAAAGCTAGGGTTTCTAAGTCAGTATGTGCA
TTCACATAACGAGCTGTTAATGGTGAGCAAAGTATTACATACTAACTAGATTTTCCACATCTGT
ATAGTATATTATATGTATTTTGTGGTATCGAGATTATAGAGAGTTTAGAGTGTCAAACATGCGT
TTAATGTGTATTTTTAAACAAATTTATGGCAATTAAAATATTTGGAGACAAGGGTATCACATTT
CAATTTGTAAAACTCTTTTTAACTCTACTGTGTCATTATGATGCTTTGTATAATGCCAAACCAT
AGCTGGAGAAACTAAGTTTAATAAATATCAGATAGCTTTTCTGTATAACGTTTATATGCACTGT
GCTCTCACTTCTTCAGCTCCTATCGTGGTCTTTTTGTGTAGTTGCTCTTTGTGTCTTAGGGGGT
CCAGTCTGACTCTGTAAAGGTCTGGTCCCACCAGCACAGGTCTCATTTTTTGGTTACAGAAATT
TTGGACTCAGGACTGGAGAGATGGCTTAGAAGTTAAGGGCATGGGGCTGGGGATTTAGCTCAGT
GGTAGAGCGCTTACCTAGGAAACTCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAGAA
CCAAAAAAAAAGAAGAAGTTAAGGGCACTGCCTGCTGCTCTTCCAGAGGACCCAGGTTCAAGTC
TCAGCACTTATATGGTGGCTCACAGCTGTCTGTGACTACAGTTCCTGGGAATCTAACACCCTTA
CACAGACATGAATACAGAGAAAACACCAATGCACATAAAATAAATTTTTTAAAAAATGTTGGCC
TCATGGCCATGGGTCCTGTCCATGAATCTCAGTTGTCCTACACCAACAGACATCTTCAGTCTTT
CTTGATGCTCTGAAGACATAAACTATTGTTTATTTTTACTATTTATTTATTTGGGTTTTTTTTT
TTTTGGTTTGGTTTTGTTTTGTTTTCCTTAGACAGGTCTCACTGTGTAGCCCTGGCTAGCCTGA
AACTCACTGTATAGACCTGACTTTCCTTGAACCTATGGAGATCAGCCTGCCTCTGCC

hide sequence

RefSeq Acc Id:

XM_006246263 ⟹ XP_006246325

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	37,998,319 - 38,079,873 (+)	NCBI
mRatBN7.2	10	37,498,825 - 37,579,044 (+)	NCBI
Rnor_6.0	10	38,692,167 - 38,772,314 (+)	NCBI
Rnor_5.0	10	38,473,786 - 38,555,300 (+)	NCBI

Sequence:

show sequence

CCGGCTGCGGGAGTCGAGTCGTCGTCGCCGCCGCCGCCCCCAGCGGACGGGGCGGGGATCTCGG
TGCCAGGGCCCCGTCAGCCCGCCCCCGCCACCGCCTCAGTCAGCCGTCCGGGGCTCGGCCGGGC
CGTCATGGAGCGGGGCGGAACCATGGCGTCCGCCGTGTGAAGTGCGCCGCCTCGGCTCCCCTTG
GCCTCCGGATCCGCCGCTGCCCCTTGCCCTAGGCAGCCGGTCGCCGCCTCCTGGGCGGGCCCGA
ATGCGCGTCCGGTGAAGGTGCACGCCGGGCGCCGCCGCCGCCGCCGCCACAGCCGCGGTCGGGA
GATGGTTCGGGCCTAGCGGAGCGGGGACTGGAGCAACATGAACCGTGAAGACCGGAATGTGCTG
CGCATGAAAGAAAGGGAAAGGCGGAATCAGGAAATTCAGCAGGGTGAAGACGCCTTCCCACCTA
GTTCTCCTCTCTTTGCTGAGCCGTACAAAGTTACTAGCAAAGAAGATAAGTTATCAAGTCGTAT
TCAGAGTATGCTTGGAAACTACGATGAAATGAAGGATTACATAGGAGACAGATCTATACCAAAG
CTTGTTGCAATTCCCAAGCCTGCAGTACCGACGACAACAGACGAGAAAGCAAACCCAAATTTTT
TTGAACAGAGACATGGAGGATCTCATCAGAGTAGCAAGTGGACTCCTGTAGGACCTGCACCCAG
CACCTCTCAGTCTCAGAAGCGCTCCTCTGGCTTGCAGAGTGGACACAGTAGCCAGCGGAGCAGT
GCAGGTGGGAGTGGCGCTAGTGGTAGTGGCCAGAGGCATGACCGTGACTCCTACAGCAGTAGCA
GGAAAAAAGGCCAGCACGGGTCAGAGCACTCCAAATCACGATCCTCAAGCCCTGGAAAACCCCA
GGCTGTTTCTTCACTAAGTTCTAGTCATTCCAGGTCTCATGGGAATGACCACCATAGCAAGGAA
CATCAGCGCTCCAAATCACCTCGGGACCCTGATGCCAACTGGGATTCTCCTTCCCGGGTACCTT
TTTCAAGTGGGCAACATTCAAGTCAGTCTTTCCCACCTTCTTTGATGTCAAAATCTAGTTCAAT
GTTACAGAAACCCACTGCCTATGTACGGCCCATGGATGGACAGGAGTCTGTGGAACCAAAGCTG
TCCTCTGAGCACTACAGCAGCCAGTCTCATGGTAGTAACATGACTGAGCTGAAGCCCAGCAGCA
AAGCACATCTTACCAAGCTGAAAATACCTTCCCGACCTCTGGATGCATCAGTTTCTGGTGATGT
AAGCTGTGTGGATGAAATACTTAAAGAGATGACGCACTCATGGCCTCCCCCTCTAACGGCTATT
CATACACCATGCAAAACAGAACCTTCCAAATTTCCTTTTCCAACTAAGGAGTCTCAGCAGTCTA
ACTTTGGCTCTGGAGAACAAAAAAGATACAGTACTTCTGCTAAAACATCAAATGGACACCAGTC
AAAATCTATGTTAAAAGATGACTTAAAACTAAGCAGCAGTGAAGACAGTGATGGGGAACAGGAT
TGTGATAAGACAATGCCAAGGAGTACACCAGGAAGTAACTCTGAGCCTTCACACCATAATAGTG
AGGGAGCAGATAACTCCAGGGATGACTCAAGCAGCCACAGTGGGTCTGAAAGCAGCTCTGGGTC
CGACTCCGAGAGTGAAAGCAGCTCCAGTGACAGTGAGGCAAATGAGCCATCCCAGAGCGCATCC
CCTGAGCCTGAACCACCACCAACCAACAAGTGGCAACTTGATAATTGGTTGAACAAAGTGAACC
CACATAAAGTGTCCCCAGCTTCCTCTGTAGATAGCAACATCCCATCGTCTCAAGCCTACAAGAA
AGAAGGCCGAGAGCAGGGCACTGCCAGTAACTACACAGATCCAGGTGGGGCCAAAGAAGCGAGC
TCTGCCACTCCGGGACGAGACTCTAAAACTATCCAAAAAGGATCAGAAAGTGGCCGTGGGAGGC
AGAAGTCTCCTGCACAGAGTGACAGTACCACACAGAGGAGAACTGTTGGCAAAAAACAACCCAA
AAAAACTGAGAAGTCAGCTGCTGAAGAGCCCCGAGGAGGCCTGAAGATAGAAAGTGAGACCCCT
GTGGACATGGCTACCAGCATGCCCTCCAGCAGGCATAAGGCAGCCACCAAGGGCTCAAGGAAAC
CTAACATCAAAAAGGAGTCGAAATCTTCCCCTCGACCTACAGCAGAGAAAAAGAAATACAAGTC
AGCAAGTAAATCCTCCCAGAAATCTCGGGAAATCATAGAAACAGATAGCTCCTCCTCAGATTCA
GATGAGAGGGAGAGCCTCCCTCCCTCCTCCCAGACTCCTAAGTACCCTGAGAGCAATAGGACTC
CTGTCAAACCCTCCTCGGCGGAGGAAGACGATAGCTTTTTCCGGCAGCGGATGTTCTCTCCTAT
GGAAGAGAAGGAGCTCCTTTCCCCACTCAGTGACCCTGATGACAGGTACCCACTCATTGTGAAG
ATAGACCTGAATCTTTTGACTAGAATACCCGGGAAGCCTTACAAAGAAACAGAGCCACCCAAGG
GGGAAAAGAAAAATGTTCCAGAAAAACACTCAAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGC
TTCCAACAAAGGCAAGAGGAAACACAAGAATGATGATGATAACCGAGCCAGTGAGAGCAAAAAA
CCCAAGACGGAGGACAAGAACTCATCAGCCCACAAGCCATCCAGCAGCAAAGAGTCATCGAAGC
AGAGTAGTACAAAAGAAAAGGACTTGCTACCTTCACCTGCTGGGCCTGTTCCTTCAAAAGATTC
AAAAACAGAGCATGGCTCTCGGAAGAGGACTGTCAGTCAGTCATCATCCTTAAAGTCCAGCAGT
ACCAGCAACAAAGAGAACAGTGGCAGCAGCAAGAGCACTTCCTCCACAGCAAAACAGAAGAAGA
CTGAAGGGAAGGTTTCCAGCAGCTCCAAAGAGGCCAAGGAGAAGGCTCCAAATAGCTCCTCTAA
TTGTCCTCCGTCTACACCAACTCCTGATTCTTCGAAGCCTCGAAGAACGAAGCTCGCCTTTGAT
GACAGAAATTATTCAGCAGACCATTATTTACAAGAAGCAAAAAAACTCAAACACAATGCAGATG
CTTTGTCTGATAGGTTTGAGAAAGCTGTGTACTACCTTGATGCCGTAGTGTCTTTCATTGAATG
TGGGAATGCATTAGAGAAGAACGCTCAGGAATCCAAGTCTCCATTCCCTATGTACTCAGACACA
GTGGAGCTTATTAAATACACTATGAAACTAAAGAATTATTTGGCGCCAGATGCTACAGCTGCAG
ACAAGAGACTCACAGTACTTTGCCTGAGATGCCAGTCATTGTTGTACCTGAGGCTGTTCAAACT
GAAGAAGGAGAACGCTCTGAAGTACTCCAAGACGCTGACTGAGCACCTGAAGAATTCTTACAGT
AATTCTCAAGCACCTTCACCTGGCTTGGGGAGCAAAGCTGTTGGGATGCCCTCCCCTGTTTCTC
CAAAGCTGTCACCAGGCAATTCTGGAAGTTACTCTTCTGGGGGAAGTAGTGCTTCAGCAAGTGG
TTCTTCGGTGACCATTCCACAGAAAATCCACCAGATGGCAGCAAGCTATGTCCAGGTTACATCT
AACTTCCTCTATGCCACAGAAATTTGGGACCAAGCTGAACAGCTTTCCAAAGAACAAAAAGAAT
TCTTTGCTGAACTGGACAAAGTGATGGGCCCTCTCATCTTTAATGCAAGCATCATGACAGATCT
GGCTCGTTACACCCGGCAGGGACTGCATTGGCTTCGGCAGGATGCCAAGCTGATATCTTGAACT
GAACATACTCTCGTTGCCTCTGATTTTTTCCACAACACTGTGTCCCATCACAAAGGAAAACTGC
CATGACACACACCTAGTCGACACTAAGAATGAGGACTGGTTCTCTCCTCTGGTTCATGTTGTTG
TTTCTATAGCCCAAAGCCATCTAATCAATTGACCCTTTCAATATTTCTAATGTGACTAGTATTT
AAATGTTCTAAACATGCAGTACATCACAAGATGGTTTTAGTAATTGGAATTCCAGTTGCAATTC
ATAAATAATCAAGTAAAATTCTATTTATTTTCATTTTTCAAGTTCCCAGATTGGAGCTTGTTTA
AAGCTTAGTATTTCTGCCTATAAATTTATTCTGTTGAATATTTAGCATAAATTTAATGTAAGCA
TTTTATTTATATATTTTGGGAGCTGTGTTACTTAATGTCTTCTAAGATAAGAGTTGGCTTGTCC
AAGACAGGACTTGTTCTTTCTACAGCTACTCACCTGTGTTCTTTTAAGTCTTACTACAGTTCCA
CTATTGTAGGGTTTATGCTTGATATTGAGGATGCTCTTCACATGTGAAAAGTCATTTAAGCATG
AGGAGATGGCATTCTACATGGGTGCAGAGATGGGGTGGGTCTGGTTTGGTATGCATTATTTCGA
AACTGTGAATGTGTGTTGGTAACACTAGCACTCACAAGGTGACTACATTGCATCTAATGCATTA
CAGAAAGCAGATTGCTAGGGAGGCACGTGATGCTGCATGGCTCCTAAAGGACAATCTTAAACTA
TGAGCTCATTAAACCTTCTATTCCTTTTTGTTTTACTCATTTGACACTTCACTGAAACAGAGTA
AGTTACTCCTAAAAACAGTGGCCCAGTTTCTGAAGGCTGCAGCCTGTATTCATTGATAATGTCT
GCAGATTTCCCCTATGGTGGAGAGATTGTGATGCTCAGATATGACAGTGCAGTAGTAACTGGAG
CTGAAAGGAGGTGTCCCAGTGTTTTAATGTGGAGATAATGAATTTCGCTTTCCAAAGATCCTCA
TCAACGATGGACACTTTTGACAGGATTGTAAAACTCACAGTAGCAGCTGGGCATGGTTGTGCAT
GTCTGTAATCCCAGCACTGGGAAGTGATGACAGGAGGGTCAGGAGGTCAGGGTCATCCTCAAGC
TACATAAAGCTAGACAGTGAGTTTGGGGCTAGCCTGAGCTACATGATCCCTCGTCACATTAAAG
AAAGAAAGAAAATATACTAGAAAAATATGTAACTTAGCTCAATATGAGCTTTCTTGGAAAGGGG
GAAGTAATAGGGATAGTGCTTAGGAAGCCAGCTCTGTAACAATTCCTTATCAAACTACTGTTCC
CGACAAGGTGCGTATAGCAGGGAAGGGCAAGGAATGTCTCTCTTCCTCTATACTTCTTTTTAGT
GACCCCCGTCATGTCTGGTGTGCCTTAAATCTTAACTTTAAATGATAACTCTATGGATTGTTTA
CAGATAAAGTTTTATGCTGGGACCAGATTAGCCATGCATGGTTGGTCCTCTACAATAATAATTT
CAAATTCTCTTTGATTTTAAATCTTCCTTTAGAGACACATTAAAATAGATTCCTTCAGAAAAGC
TAGTACTTTGATATCTGACTTAGTGTAATCAATTGGGTATAATGCTGCTTCAAAAATGGCTTTT
CCTTCTCATTCCAAAAATTCATCCAATTAGGGAAAAGTTCCCTCTTAATAGCAGTTGATTATTG
AGACTTGAATGGAACAGGGGAAAGAGGGCTAGAAATCTTCCCTGCTCCCCTTCACTGCCTGCTC
CTGAAGATAGTGAGCTTTGGCCTGCAGTCTCATAGTTACAGAGCTTAACTGCTTTGTGTCTCAT
TGTTTTTACATAGTGTTGAGGGTTGATATCTACAGCTTATGCTGAATTTAACACTTTTCCCTTG
AAGAAATTGCCTCTGTACCTTTCTAGTTTAATCATAGTGTATTTAAGGAATACTTCTTCAGAGG
CCGTTGTTTCCTCTCGTGCTAGTAACCTCCGTGGTCTAACAGTTGTGTGTCCTGTCCTTGCCTC
TTCTCTCTCATGCTGGCTCCTTAATTTCAGGGAGGTCTTAGAAGTAGAACAAGCGCCCTCTATG
CTTTCAGCCTTCAGCAGCTGCAGTGCTGGGGCTCTGCTTTCCAGCTCTGGTCTGTGTGCAGCAC
ACTCTAGAGTGGCTCTGACTCGTGTTAAAGCAGAGTTTCCTACATGTTTATGGTGCTGCTTTAA
GATGTTTTCTCTTTAAAACTGTCAATTCTTGGAGAATGAAACTGTTAAACCTTTCATTGTGGAG
GATTTTCCTCACCAGGTAGAAATGGGCAATGGATCAAAATCCGATCCTAAGTGATTTGATGTCA
TAGTGTGTGAGACTATACACTCTTTGTGTCTCTTCTCAGATGTTTTGTCTCAGTCTTGTTCAGC
ACATACCTTACTCCTTTACAAGTGATCACTCCCCCCTCTCAGTAGGCACCCTTGGTGTGTTTTA
GCCATTGAAAGATGATTTGACAAGTGGCTACAAACCTAGTCTGAAGCTTGCACTCACTGTGTAG
TTAGGGATAGAAATAGCAGCTGTCATTAATACTCAGTTCACTGCTCTGAAGATCACATTTCTGT
GCCAGGAGGCAGCAGCATGCACCATTGGACTCTGGGCAGGCATCTCACACCTGTCACAGTGGTC
CTGCCTGGGAGAGGCTGGGCTATGGGGAGCACTCCCCTCCAGGCATTCAAGATTACACAGCCTA
GCCCATGTCCCATTCTGGCTGGAGAGCACCCAGCCCTTTCCTTGCTCAGTGACACATTTTTTCT
GGGCAAAAAGCTATGAAGTCACTTTATTACCAGTAAGTGCTTCAAATAAAGTCACAGATATAGC
CGCTAAAGGGAGAAGATTGACCACTACTGACTTAATTCTCCACTATAAAAGCAGTTCAGAGTCG
GGTGTACATGCGTCCACATTGCTGCTGTTGCTGCTGTTGGTTTTTTCTGGGAAGCTCTTACACT
AGGGATTTATAGGCATCTGGGCTGCACTTTGAATGACACACTTGTGGCTTTAGAGTCGCTGTTG
TTCTTTTGTTTTAAAATTGTTCTTCGTTTCTTTTCATTAAAGGTTTAATCAGCTAGATTAGAGA
GCATCATTTGTATTTAACAGCTGAAACTTCGGTACGTTGCCGTTTAATGAATGAACTTGCATTG
TGTAGCCAGGGCCTACAAAGGCTCTTGTCAGGAATACAAGCACTGCCTGGGGCTGGTGCTCAGA
GGAGTTTTCAGTGCAACCAGTAATAGCTCCATTGGGTGATGCCTAGCTCAGTTGAGAAGGGGGA
TGCTGTACACTTCTAGGTATGAGGGTATGCGACTTTGGATCTTAAAATTATGTACACATACACA
CTTTATATATATGTACGTATGTATGTATGAAAACATGGAATTAGTTTGTCAAAATGTGTGTGTT
TAGTATTTTAGCTTAGTGCAACTATTTCCACATTATTTATTAAATTGATCTAAGACACTTTGTT
CTTGGCACCTTGAATATTAACATTCAAGGATGCAATGTGTATTCCTTTAGATTGTTAAAGCTTA
ATTACTATGATTTGTAGTAAATTAACTTTTGAAATCTATTTGAGCCCTTCTGTAGTATAATAGG
GCTCTTACAGGGTGGGAAAGATTTTAATTTTCCAATAGCTAATTGAACAAAATGGCTTCATTGT
ATATTTTGATTTATAGGAGTCTGTAGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGT
TTTAGGTGGGTGGAATGGTGTTTAGACTATACCTAAGTGACTTGGAAAGCCAGAGCACCTTGTT
CAAATCCAGACTCCTGTAACTCCTATTCTTCCAGGATGTGGAACACAAATCCCGCCCAGCTTCA
CATTTCAATTAGAGAGGCAGACTTCTTTTCCAGTAATATTGTACACCTAGTGTTGCTATGAGTG
AAATCAGTAGGAAAAAGTACTGAATGAGGGTCTGGGACGATGCACTGACCTGGCCAGCTGTCAC
ACCTGTAAATGTACCTTTCCCATGCCTACCAGTGGAGGCATTCAGACCAGAAAAGCAAGCCAGC
AAGTAACATTCTTAAGGTTAGAGAAAGCCAGTTGTGCTGCTGCATACCCTGAGACAAAGAGCAT
CCTTTGCCAGATAGAGAGCCTGAGACACCAGGCCACTCTCCACAAACTAGATACATTTAAAAGT
TACTCGGTCAACCAGGTGTGGTAGTGCATGCTTTAGTTCTAGTGCTTGGACTGGCAGCTCGAGA
CCAGCATGCACCACCCAGACGTCTCCCTGTGAGAAGAGCAAAGTGGAGTAAGAGGATGCTGGCC
TGCAGAACTGTTTACATGACCCCTTGGTTGATGAAAAAGAACCTGCCGTTTGCAGACCCAGGGG
ACAGAAAAGAAGCTACGCTTGCCTTGTGAATGGCGTTTAGAACAAGGTGTTCAGGTGAAGTCTC
AGTAGCCAGAGGTTTCAGCAGCTTCAATTGCTAACATTTAAGAAGTTGATTTTCAGGAATGTCT
GCATGCGCCTCTCCTTGCTGTCATTGATCAGCTCAGCAGAATCATCATCCTTAAATATGGAGAA
AGCTCTCAGATGAACGTGGACAAGCTCCTACCCAGAAACCCTAACCATACTTGGTTTTGACTGT
GCTGCTTCTGTGTGAGGTTTCTTCTCAGCTTTTAGCCACTGGGGTTTTCTGCCTGTTCTGTACC
TCTCTGGAAGATGTCGATTTGGAAGTGCTGCCTTTCAAACCAGTGCCACAGCGTCCGTATGGTT
GAGCTTGTCGCTGATTCAGAGGTGTCCCCATTATGCTCACACCTGGCACATCACTGATGTGAGC
ATTTGACAGTACGTGGGCGAGGGTAGGGGTGGCGCTAGCCAACAGCGCTGGCTTAATTGGCAGG
GCCTGCAAAGGCCCCACTTGAGGGCCAGACACTAGGTTGGTTAAGCACAGTTAGGGAAATTTCT
ACCTAGCCTCCGTTTTGAATGACTCTGAGAAATTTTATATATGGAGGATGGAAATGCGTATATA
TTTATTGAAGATCTTTTTATTTGAAATTAAAATCCTTTGGTAAATAATGGTTTGATATTTGGGG
AGGGTTTTGGAGGGGAAGTAACACAGTTGATAAAGTACAGGCCTGGTGACTCTTCTGAAAGGCT
CTGTTGCTGGTAGGAGAGGCCTTTATCTTGTACATGATCCAAGCGTTGTCTTATGTTTCTTTTA
TCCAAAATATCTAGGCATCTGACACTTTGAACCAAAATTTCAATTGTATACTGTGATTTTTATT
TGTTGCAATATGTTAAATTTCAGAGGTACTTTGGGGCTCAAAAGCTAGGGTTTCTAAGTCAGTA
TGTGCATTCACATAACGAGCTGTTAATGGTGAGCAAAGTATTACATACTAACTAGATTTTCCAC
ATCTGTATAGTATATTATATGTATTTTGTGGTATCGAGATTATAGAGAGTTTAGAGTGTCAAAC
ATGCGTTTAATGTGTATTTTTAAACAAATTTATGGCAATTAAAATATTTGGAGACAAGGGTATC
ACATTTCAATTTGTAAAACTCTTTTTAACTCTACTGTGTCATTATGATGCTTTGTATAATGCCA
AACCATAGCTGGAGAAACTAAGTTTAATAAATATCAGATAGCTTTTCTGTATAACGTTTA

hide sequence

RefSeq Acc Id:

XM_006246264 ⟹ XP_006246326

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	37,998,319 - 38,079,873 (+)	NCBI
mRatBN7.2	10	37,498,998 - 37,579,044 (+)	NCBI
Rnor_6.0	10	38,692,232 - 38,772,314 (+)	NCBI
Rnor_5.0	10	38,473,786 - 38,555,300 (+)	NCBI

Sequence:

show sequence

GCCAGGGCCCCGTCAGCCCGCCCCCGCCACCGCCTCAGTCAGCCGTCCGGGGCTCGGCCGGGCC
GTCATGGAGCGGGGCGGAACCATGGCGTCCGCCGTGTGAAGTGCGCCGCCTCGGCTCCCCTTGG
CCTCCGGATCCGCCGCTGCCCCTTGCCCTAGGCAGCCGGTCGCCGCCTCCTGGGCGGGCCCGAA
TGCGCGTCCGGTGAAGGTGCACGCCGGGCGCCGCCGCCGCCGCCGCCACAGCCGCGGTCGGGAG
ATGGTTCGGGCCTAGCGGAGCGGGGACTGGAGCAACATGAACCGTGAAGACCGGAATGTGCTGC
GCATGAAAGAAAGGGAAAGGCGGAATCAGGAAATTCAGCAGGGTGAAGACGCCTTCCCACCTAG
TTCTCCTCTCTTTGCTGAGCCGTACAAAGTTACTAGCAAAGAAGATAAGTTATCAAGTCGTATT
CAGAGTATGCTTGGAAACTACGATGAAATGAAGGATTACATAGGAGACAGATCTATACCAAAGC
TTGTTGCAATTCCCAAGCCTGCAGTACCGACGACAACAGACGAGAAAGCAAACCCAAATTTTTT
TGAACAGAGACATGGAGGATCTCATCAGAGTAGCAAGTGGACTCCTGTAGGACCTGCACCCAGC
ACCTCTCAGTCTCAGAAGCGCTCCTCTGGCTTGCAGAGTGGACACAGTAGCCAGCGGAGCAGTG
CAGGTGGGAGTGGCGCTAGTGGTAGTGGCCAGAGGCATGACCGTGACTCCTACAGCAGTAGCAG
GAAAAAAGGCCAGCACGGGTCAGAGCACTCCAAATCACGATCCTCAAGCCCTGGAAAACCCCAG
GCTGTTTCTTCACTAAGTTCTAGTCATTCCAGGTCTCATGGGAATGACCACCATAGCAAGGAAC
ATCAGCGCTCCAAATCACCTCGGGACCCTGATGCCAACTGGGATTCTCCTTCCCGGGTACCTTT
TTCAAGTGGGCAACATTCAAGTCAGTCTTTCCCACCTTCTTTGATGTCAAAATCTAGTTCAATG
TTACAGAAACCCACTGCCTATGTACGGCCCATGGATGGACAGGAGTCTGTGGAACCAAAGCTGT
CCTCTGAGCACTACAGCAGCCAGTCTCATGGTAGTAACATGACTGAGCTGAAGCCCAGCAGCAA
AGCACATCTTACCAAGCTGAAAATACCTTCCCGACCTCTGGATGCATCAGTTTCTGGTGATGTA
AGCTGTGTGGATGAAATACTTAAAGAGTCTCAGCAGTCTAACTTTGGCTCTGGAGAACAAAAAA
GATACAGTACTTCTGCTAAAACATCAAATGGACACCAGTCAAAATCTATGTTAAAAGATGACTT
AAAACTAAGCAGCAGTGAAGACAGTGATGGGGAACAGGATTGTGATAAGACAATGCCAAGGAGT
ACACCAGGAAGTAACTCTGAGCCTTCACACCATAATAGTGAGGGAGCAGATAACTCCAGGGATG
ACTCAAGCAGCCACAGTGGGTCTGAAAGCAGCTCTGGGTCCGACTCCGAGAGTGAAAGCAGCTC
CAGTGACAGTGAGGCAAATGAGCCATCCCAGAGCGCATCCCCTGAGCCTGAACCACCACCAACC
AACAAGTGGCAACTTGATAATTGGTTGAACAAAGTGAACCCACATAAAGTGTCCCCAGCTTCCT
CTGTAGATAGCAACATCCCATCGTCTCAAGCCTACAAGAAAGAAGGCCGAGAGCAGGGCACTGC
CAGTAACTACACAGATCCAGGTGGGGCCAAAGAAGCGAGCTCTGCCACTCCGGGACGAGACTCT
AAAACTATCCAAAAAGGATCAGAAAGTGGCCGTGGGAGGCAGAAGTCTCCTGCACAGAGTGACA
GTACCACACAGAGGAGAACTGTTGGCAAAAAACAACCCAAAAAAACTGAGAAGTCAGCTGCTGA
AGAGCCCCGAGGAGGCCTGAAGATAGAAAGTGAGACCCCTGTGGACATGGCTACCAGCATGCCC
TCCAGCAGGCATAAGGCAGCCACCAAGGGCTCAAGGAAACCTAACATCAAAAAGGAGTCGAAAT
CTTCCCCTCGACCTACAGCAGAGAAAAAGAAATACAAGTCAGCAAGTAAATCCTCCCAGAAATC
TCGGGAAATCATAGAAACAGATAGCTCCTCCTCAGATTCAGATGAGAGGGAGAGCCTCCCTCCC
TCCTCCCAGACTCCTAAGTACCCTGAGAGCAATAGGACTCCTGTCAAACCCTCCTCGGCGGAGG
AAGACGATAGCTTTTTCCGGCAGCGGATGTTCTCTCCTATGGAAGAGAAGGAGCTCCTTTCCCC
ACTCAGTGACCCTGATGACAGGTACCCACTCATTGTGAAGATAGACCTGAATCTTTTGACTAGA
ATACCCGGGAAGCCTTACAAAGAAACAGAGCCACCCAAGGGGGAAAAGAAAAATGTTCCAGAAA
AACACTCAAGAGAGGTGCAGAAGCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAAACA
CAAGAATGATGATGATAACCGAGCCAGTGAGAGCAAAAAACCCAAGACGGAGGACAAGAACTCA
TCAGCCCACAAGCCATCCAGCAGCAAAGAGTCATCGAAGCAGAGTAGTACAAAAGAAAAGGACT
TGCTACCTTCACCTGCTGGGCCTGTTCCTTCAAAAGATTCAAAAACAGAGCATGGCTCTCGGAA
GAGGACTGTCAGTCAGTCATCATCCTTAAAGTCCAGCAGTACCAGCAACAAAGAGAACAGTGGC
AGCAGCAAGAGCACTTCCTCCACAGCAAAACAGAAGAAGACTGAAGGGAAGGTTTCCAGCAGCT
CCAAAGAGGCCAAGGAGAAGGCTCCAAATAGCTCCTCTAATTGTCCTCCGTCTACACCAACTCC
TGATTCTTCGAAGCCTCGAAGAACGAAGCTCGCCTTTGATGACAGAAATTATTCAGCAGACCAT
TATTTACAAGAAGCAAAAAAACTCAAACACAATGCAGATGCTTTGTCTGATAGGTTTGAGAAAG
CTGTGTACTACCTTGATGCCGTAGTGTCTTTCATTGAATGTGGGAATGCATTAGAGAAGAACGC
TCAGGAATCCAAGTCTCCATTCCCTATGTACTCAGACACAGTGGAGCTTATTAAATACACTATG
AAACTAAAGAATTATTTGGCGCCAGATGCTACAGCTGCAGACAAGAGACTCACAGTACTTTGCC
TGAGATGCCAGTCATTGTTGTACCTGAGGCTGTTCAAACTGAAGAAGGAGAACGCTCTGAAGTA
CTCCAAGACGCTGACTGAGCACCTGAAGAATTCTTACAGTAATTCTCAAGCACCTTCACCTGGC
TTGGGGAGCAAAGCTGTTGGGATGCCCTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCTG
GAAGTTACTCTTCTGGGGGAAGTAGTGCTTCAGCAAGTGGTTCTTCGGTGACCATTCCACAGAA
AATCCACCAGATGGCAGCAAGCTATGTCCAGGTTACATCTAACTTCCTCTATGCCACAGAAATT
TGGGACCAAGCTGAACAGCTTTCCAAAGAACAAAAAGAATTCTTTGCTGAACTGGACAAAGTGA
TGGGCCCTCTCATCTTTAATGCAAGCATCATGACAGATCTGGCTCGTTACACCCGGCAGGGACT
GCATTGGCTTCGGCAGGATGCCAAGCTGATATCTTGAACTGAACATACTCTCGTTGCCTCTGAT
TTTTTCCACAACACTGTGTCCCATCACAAAGGAAAACTGCCATGACACACACCTAGTCGACACT
AAGAATGAGGACTGGTTCTCTCCTCTGGTTCATGTTGTTGTTTCTATAGCCCAAAGCCATCTAA
TCAATTGACCCTTTCAATATTTCTAATGTGACTAGTATTTAAATGTTCTAAACATGCAGTACAT
CACAAGATGGTTTTAGTAATTGGAATTCCAGTTGCAATTCATAAATAATCAAGTAAAATTCTAT
TTATTTTCATTTTTCAAGTTCCCAGATTGGAGCTTGTTTAAAGCTTAGTATTTCTGCCTATAAA
TTTATTCTGTTGAATATTTAGCATAAATTTAATGTAAGCATTTTATTTATATATTTTGGGAGCT
GTGTTACTTAATGTCTTCTAAGATAAGAGTTGGCTTGTCCAAGACAGGACTTGTTCTTTCTACA
GCTACTCACCTGTGTTCTTTTAAGTCTTACTACAGTTCCACTATTGTAGGGTTTATGCTTGATA
TTGAGGATGCTCTTCACATGTGAAAAGTCATTTAAGCATGAGGAGATGGCATTCTACATGGGTG
CAGAGATGGGGTGGGTCTGGTTTGGTATGCATTATTTCGAAACTGTGAATGTGTGTTGGTAACA
CTAGCACTCACAAGGTGACTACATTGCATCTAATGCATTACAGAAAGCAGATTGCTAGGGAGGC
ACGTGATGCTGCATGGCTCCTAAAGGACAATCTTAAACTATGAGCTCATTAAACCTTCTATTCC
TTTTTGTTTTACTCATTTGACACTTCACTGAAACAGAGTAAGTTACTCCTAAAAACAGTGGCCC
AGTTTCTGAAGGCTGCAGCCTGTATTCATTGATAATGTCTGCAGATTTCCCCTATGGTGGAGAG
ATTGTGATGCTCAGATATGACAGTGCAGTAGTAACTGGAGCTGAAAGGAGGTGTCCCAGTGTTT
TAATGTGGAGATAATGAATTTCGCTTTCCAAAGATCCTCATCAACGATGGACACTTTTGACAGG
ATTGTAAAACTCACAGTAGCAGCTGGGCATGGTTGTGCATGTCTGTAATCCCAGCACTGGGAAG
TGATGACAGGAGGGTCAGGAGGTCAGGGTCATCCTCAAGCTACATAAAGCTAGACAGTGAGTTT
GGGGCTAGCCTGAGCTACATGATCCCTCGTCACATTAAAGAAAGAAAGAAAATATACTAGAAAA
ATATGTAACTTAGCTCAATATGAGCTTTCTTGGAAAGGGGGAAGTAATAGGGATAGTGCTTAGG
AAGCCAGCTCTGTAACAATTCCTTATCAAACTACTGTTCCCGACAAGGTGCGTATAGCAGGGAA
GGGCAAGGAATGTCTCTCTTCCTCTATACTTCTTTTTAGTGACCCCCGTCATGTCTGGTGTGCC
TTAAATCTTAACTTTAAATGATAACTCTATGGATTGTTTACAGATAAAGTTTTATGCTGGGACC
AGATTAGCCATGCATGGTTGGTCCTCTACAATAATAATTTCAAATTCTCTTTGATTTTAAATCT
TCCTTTAGAGACACATTAAAATAGATTCCTTCAGAAAAGCTAGTACTTTGATATCTGACTTAGT
GTAATCAATTGGGTATAATGCTGCTTCAAAAATGGCTTTTCCTTCTCATTCCAAAAATTCATCC
AATTAGGGAAAAGTTCCCTCTTAATAGCAGTTGATTATTGAGACTTGAATGGAACAGGGGAAAG
AGGGCTAGAAATCTTCCCTGCTCCCCTTCACTGCCTGCTCCTGAAGATAGTGAGCTTTGGCCTG
CAGTCTCATAGTTACAGAGCTTAACTGCTTTGTGTCTCATTGTTTTTACATAGTGTTGAGGGTT
GATATCTACAGCTTATGCTGAATTTAACACTTTTCCCTTGAAGAAATTGCCTCTGTACCTTTCT
AGTTTAATCATAGTGTATTTAAGGAATACTTCTTCAGAGGCCGTTGTTTCCTCTCGTGCTAGTA
ACCTCCGTGGTCTAACAGTTGTGTGTCCTGTCCTTGCCTCTTCTCTCTCATGCTGGCTCCTTAA
TTTCAGGGAGGTCTTAGAAGTAGAACAAGCGCCCTCTATGCTTTCAGCCTTCAGCAGCTGCAGT
GCTGGGGCTCTGCTTTCCAGCTCTGGTCTGTGTGCAGCACACTCTAGAGTGGCTCTGACTCGTG
TTAAAGCAGAGTTTCCTACATGTTTATGGTGCTGCTTTAAGATGTTTTCTCTTTAAAACTGTCA
ATTCTTGGAGAATGAAACTGTTAAACCTTTCATTGTGGAGGATTTTCCTCACCAGGTAGAAATG
GGCAATGGATCAAAATCCGATCCTAAGTGATTTGATGTCATAGTGTGTGAGACTATACACTCTT
TGTGTCTCTTCTCAGATGTTTTGTCTCAGTCTTGTTCAGCACATACCTTACTCCTTTACAAGTG
ATCACTCCCCCCTCTCAGTAGGCACCCTTGGTGTGTTTTAGCCATTGAAAGATGATTTGACAAG
TGGCTACAAACCTAGTCTGAAGCTTGCACTCACTGTGTAGTTAGGGATAGAAATAGCAGCTGTC
ATTAATACTCAGTTCACTGCTCTGAAGATCACATTTCTGTGCCAGGAGGCAGCAGCATGCACCA
TTGGACTCTGGGCAGGCATCTCACACCTGTCACAGTGGTCCTGCCTGGGAGAGGCTGGGCTATG
GGGAGCACTCCCCTCCAGGCATTCAAGATTACACAGCCTAGCCCATGTCCCATTCTGGCTGGAG
AGCACCCAGCCCTTTCCTTGCTCAGTGACACATTTTTTCTGGGCAAAAAGCTATGAAGTCACTT
TATTACCAGTAAGTGCTTCAAATAAAGTCACAGATATAGCCGCTAAAGGGAGAAGATTGACCAC
TACTGACTTAATTCTCCACTATAAAAGCAGTTCAGAGTCGGGTGTACATGCGTCCACATTGCTG
CTGTTGCTGCTGTTGGTTTTTTCTGGGAAGCTCTTACACTAGGGATTTATAGGCATCTGGGCTG
CACTTTGAATGACACACTTGTGGCTTTAGAGTCGCTGTTGTTCTTTTGTTTTAAAATTGTTCTT
CGTTTCTTTTCATTAAAGGTTTAATCAGCTAGATTAGAGAGCATCATTTGTATTTAACAGCTGA
AACTTCGGTACGTTGCCGTTTAATGAATGAACTTGCATTGTGTAGCCAGGGCCTACAAAGGCTC
TTGTCAGGAATACAAGCACTGCCTGGGGCTGGTGCTCAGAGGAGTTTTCAGTGCAACCAGTAAT
AGCTCCATTGGGTGATGCCTAGCTCAGTTGAGAAGGGGGATGCTGTACACTTCTAGGTATGAGG
GTATGCGACTTTGGATCTTAAAATTATGTACACATACACACTTTATATATATGTACGTATGTAT
GTATGAAAACATGGAATTAGTTTGTCAAAATGTGTGTGTTTAGTATTTTAGCTTAGTGCAACTA
TTTCCACATTATTTATTAAATTGATCTAAGACACTTTGTTCTTGGCACCTTGAATATTAACATT
CAAGGATGCAATGTGTATTCCTTTAGATTGTTAAAGCTTAATTACTATGATTTGTAGTAAATTA
ACTTTTGAAATCTATTTGAGCCCTTCTGTAGTATAATAGGGCTCTTACAGGGTGGGAAAGATTT
TAATTTTCCAATAGCTAATTGAACAAAATGGCTTCATTGTATATTTTGATTTATAGGAGTCTGT
AGGTGTCTGGGTCCCAAGGACATCTACTGAGGATGACTGTTTTAGGTGGGTGGAATGGTGTTTA
GACTATACCTAAGTGACTTGGAAAGCCAGAGCACCTTGTTCAAATCCAGACTCCTGTAACTCCT
ATTCTTCCAGGATGTGGAACACAAATCCCGCCCAGCTTCACATTTCAATTAGAGAGGCAGACTT
CTTTTCCAGTAATATTGTACACCTAGTGTTGCTATGAGTGAAATCAGTAGGAAAAAGTACTGAA
TGAGGGTCTGGGACGATGCACTGACCTGGCCAGCTGTCACACCTGTAAATGTACCTTTCCCATG
CCTACCAGTGGAGGCATTCAGACCAGAAAAGCAAGCCAGCAAGTAACATTCTTAAGGTTAGAGA
AAGCCAGTTGTGCTGCTGCATACCCTGAGACAAAGAGCATCCTTTGCCAGATAGAGAGCCTGAG
ACACCAGGCCACTCTCCACAAACTAGATACATTTAAAAGTTACTCGGTCAACCAGGTGTGGTAG
TGCATGCTTTAGTTCTAGTGCTTGGACTGGCAGCTCGAGACCAGCATGCACCACCCAGACGTCT
CCCTGTGAGAAGAGCAAAGTGGAGTAAGAGGATGCTGGCCTGCAGAACTGTTTACATGACCCCT
TGGTTGATGAAAAAGAACCTGCCGTTTGCAGACCCAGGGGACAGAAAAGAAGCTACGCTTGCCT
TGTGAATGGCGTTTAGAACAAGGTGTTCAGGTGAAGTCTCAGTAGCCAGAGGTTTCAGCAGCTT
CAATTGCTAACATTTAAGAAGTTGATTTTCAGGAATGTCTGCATGCGCCTCTCCTTGCTGTCAT
TGATCAGCTCAGCAGAATCATCATCCTTAAATATGGAGAAAGCTCTCAGATGAACGTGGACAAG
CTCCTACCCAGAAACCCTAACCATACTTGGTTTTGACTGTGCTGCTTCTGTGTGAGGTTTCTTC
TCAGCTTTTAGCCACTGGGGTTTTCTGCCTGTTCTGTACCTCTCTGGAAGATGTCGATTTGGAA
GTGCTGCCTTTCAAACCAGTGCCACAGCGTCCGTATGGTTGAGCTTGTCGCTGATTCAGAGGTG
TCCCCATTATGCTCACACCTGGCACATCACTGATGTGAGCATTTGACAGTACGTGGGCGAGGGT
AGGGGTGGCGCTAGCCAACAGCGCTGGCTTAATTGGCAGGGCCTGCAAAGGCCCCACTTGAGGG
CCAGACACTAGGTTGGTTAAGCACAGTTAGGGAAATTTCTACCTAGCCTCCGTTTTGAATGACT
CTGAGAAATTTTATATATGGAGGATGGAAATGCGTATATATTTATTGAAGATCTTTTTATTTGA
AATTAAAATCCTTTGGTAAATAATGGTTTGATATTTGGGGAGGGTTTTGGAGGGGAAGTAACAC
AGTTGATAAAGTACAGGCCTGGTGACTCTTCTGAAAGGCTCTGTTGCTGGTAGGAGAGGCCTTT
ATCTTGTACATGATCCAAGCGTTGTCTTATGTTTCTTTTATCCAAAATATCTAGGCATCTGACA
CTTTGAACCAAAATTTCAATTGTATACTGTGATTTTTATTTGTTGCAATATGTTAAATTTCAGA
GGTACTTTGGGGCTCAAAAGCTAGGGTTTCTAAGTCAGTATGTGCATTCACATAACGAGCTGTT
AATGGTGAGCAAAGTATTACATACTAACTAGATTTTCCACATCTGTATAGTATATTATATGTAT
TTTGTGGTATCGAGATTATAGAGAGTTTAGAGTGTCAAACATGCGTTTAATGTGTATTTTTAAA
CAAATTTATGGCAATTAAAATATTTGGAGACAAGGGTATCACATTTCAATTTGTAAAACTCTTT
TTAACTCTACTGTGTCATTATGATGCTTTGTATAATGCCAAACCATAGCTGGAGAAACTAAGTT
TAATAAATATCAGATAGCTTTTCTGTATAACGTTTA

hide sequence

RefSeq Acc Id:

XM_008767684 ⟹ XP_008765906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	38,010,545 - 38,079,873 (+)	NCBI
mRatBN7.2	10	37,511,407 - 37,579,044 (+)	NCBI
Rnor_6.0	10	38,704,315 - 38,772,314 (+)	NCBI

Sequence:

show sequence

TGAGCTAAACCCCCAACCCCTTGTTAGTGCTTTTATTGACTAATAATGGTTTTAGGAAAAGCCT
TACCTCTCACTTTTCTCAGATGTCTGTGGTAGAGAAGCAGAGTGATGTGTTCTGAACCCAGCCT
TAGTGAGTACTCCTGATATATTATCTGTCTTCTGAGGCAGTAACACTTCAGTTGTGACTTTTAT
GAAAATCAGTTTGTTTGGAATTTCTGTATGCTAGTCACTGAGTTAAAGCATTGGAGGGAAGAAA
GTAAAACTTAAAATAATAACCATGTACTTGTTCTCCAGTGCCTGTGATGTGGGAATGCGTTCCT
ACTAAGGAGATGGAGTGATAGTAAATATAGTAACTCTGCTGGAGGGAAGTGCAACATGAACCGT
GAAGACCGGAATGTGCTGCGCATGAAAGAAAGGGAAAGGCGGAATCAGGAAATTCAGCAGGGTG
AAGACGCCTTCCCACCTAGTTCTCCTCTCTTTGCTGAGCCGTACAAAGTTACTAGCAAAGAAGA
TAAGTTATCAAGTCGTATTCAGAGTATGCTTGGAAACTACGATGAAATGAAGGATTACATAGGA
GACAGATCTATACCAAAGCTTGTTGCAATTCCCAAGCCTGCAGTACCGACGACAACAGACGAGA
AAGCAAACCCAAATTTTTTTGAACAGAGACATGGAGGATCTCATCAGAGTAGCAAGTGGACTCC
TGTAGGACCTGCACCCAGCACCTCTCAGTCTCAGAAGCGCTCCTCTGGCTTGCAGAGTGGACAC
AGTAGCCAGCGGAGCAGTGCAGGTGGGAGTGGCGCTAGTGGTAGTGGCCAGAGGCATGACCGTG
ACTCCTACAGCAGTAGCAGGAAAAAAGGCCAGCACGGGTCAGAGCACTCCAAATCACGATCCTC
AAGCCCTGGAAAACCCCAGGCTGTTTCTTCACTAAGTTCTAGTCATTCCAGGTCTCATGGGAAT
GACCACCATAGCAAGGAACATCAGCGCTCCAAATCACCTCGGGACCCTGATGCCAACTGGGATT
CTCCTTCCCGGGTACCTTTTTCAAGTGGGCAACATTCAAGTCAGTCTTTCCCACCTTCTTTGAT
GTCAAAATCTAGTTCAATGTTACAGAAACCCACTGCCTATGTACGGCCCATGGATGGACAGGAG
TCTGTGGAACCAAAGCTGTCCTCTGAGCACTACAGCAGCCAGTCTCATGGTAGTAACATGACTG
AGCTGAAGCCCAGCAGCAAAGCACATCTTACCAAGCTGAAAATACCTTCCCGACCTCTGGATGC
ATCAGTTTCTGGTGATGTAAGCTGTGTGGATGAAATACTTAAAGAGATGACGCACTCATGGCCT
CCCCCTCTAACGGCTATTCATACACCATGCAAAACAGAACCTTCCAAATTTCCTTTTCCAACTA
AGGAGTCTCAGCAGTCTAACTTTGGCTCTGGAGAACAAAAAAGATACAGTACTTCTGCTAAAAC
ATCAAATGGACACCAGTCAAAATCTATGTTAAAAGATGACTTAAAACTAAGCAGCAGTGAAGAC
AGTGATGGGGAACAGGATTGTGATAAGACAATGCCAAGGAGTACACCAGGAAGTAACTCTGAGC
CTTCACACCATAATAGTGAGGGAGCAGATAACTCCAGGGATGACTCAAGCAGCCACAGTGGGTC
TGAAAGCAGCTCTGGGTCCGACTCCGAGAGTGAAAGCAGCTCCAGTGACAGTGAGGCAAATGAG
CCATCCCAGAGCGCATCCCCTGAGCCTGAACCACCACCAACCAACAAGTGGCAACTTGATAATT
GGTTGAACAAAGTGAACCCACATAAAGTGTCCCCAGCTTCCTCTGTAGATAGCAACATCCCATC
GTCTCAAGCCTACAAGAAAGAAGGCCGAGAGCAGGGCACTGCCAGTAACTACACAGATCCAGGT
GGGGCCAAAGAAGCGAGCTCTGCCACTCCGGGACGAGACTCTAAAACTATCCAAAAAGGATCAG
AAAGTGGCCGTGGGAGGCAGAAGTCTCCTGCACAGAGTGACAGTACCACACAGAGGAGAACTGT
TGGCAAAAAACAACCCAAAAAAACTGAGAAGTCAGCTGCTGAAGAGCCCCGAGGAGGCCTGAAG
ATAGAAAGTGAGACCCCTGTGGACATGGCTACCAGCATGCCCTCCAGCAGGCATAAGGCAGCCA
CCAAGGGCTCAAGGAAACCTAACATCAAAAAGGAGTCGAAATCTTCCCCTCGACCTACAGCAGA
GAAAAAGAAATACAAGTCAGCAAGTAAATCCTCCCAGAAATCTCGGGAAATCATAGAAACAGAT
AGCTCCTCCTCAGATTCAGATGAGAGGGAGAGCCTCCCTCCCTCCTCCCAGACTCCTAAGTACC
CTGAGAGCAATAGGACTCCTGTCAAACCCTCCTCGGCGGAGGAAGACGATAGCTTTTTCCGGCA
GCGGATGTTCTCTCCTATGGAAGAGAAGGAGCTCCTTTCCCCACTCAGTGACCCTGATGACAGG
TACCCACTCATTGTGAAGATAGACCTGAATCTTTTGACTAGAATACCCGGGAAGCCTTACAAAG
AAACAGAGCCACCCAAGGGGGAAAAGAAAAATGTTCCAGAAAAACACTCAAGAGAGGTGCAGAA
GCAAGCCTCAGAAAAGGCTTCCAACAAAGGCAAGAGGAAACACAAGAATGATGATGATAACCGA
GCCAGTGAGAGCAAAAAACCCAAGACGGAGGACAAGAACTCATCAGCCCACAAGCCATCCAGCA
GCAAAGAGTCATCGAAGCAGAGTAGTACAAAAGAAAAGGACTTGCTACCTTCACCTGCTGGGCC
TGTTCCTTCAAAAGATTCAAAAACAGAGCATGGCTCTCGGAAGAGGACTGTCAGTCAGTCATCA
TCCTTAAAGTCCAGCAGTACCAGCAACAAAGAGAACAGTGGCAGCAGCAAGAGCACTTCCTCCA
CAGCAAAACAGAAGAAGACTGAAGGGAAGGTTTCCAGCAGCTCCAAAGAGGCCAAGGAGAAGGC
TCCAAATAGCTCCTCTAATTGTCCTCCGTCTACACCAACTCCTGATTCTTCGAAGCCTCGAAGA
ACGAAGCTCGCCTTTGATGACAGAAATTATTCAGCAGACCATTATTTACAAGAAGCAAAAAAAC
TCAAACACAATGCAGATGCTTTGTCTGATAGGTTTGAGAAAGCTGTGTACTACCTTGATGCCGT
AGTGTCTTTCATTGAATGTGGGAATGCATTAGAGAAGAACGCTCAGGAATCCAAGTCTCCATTC
CCTATGTACTCAGACACAGTGGAGCTTATTAAATACACTATGAAACTAAAGAATTATTTGGCGC
CAGATGCTACAGCTGCAGACAAGAGACTCACAGTACTTTGCCTGAGATGCCAGTCATTGTTGTA
CCTGAGGCTGTTCAAACTGAAGAAGGAGAACGCTCTGAAGTACTCCAAGACGCTGACTGAGCAC
CTGAAGAATTCTTACAGTAATTCTCAAGCACCTTCACCTGGCTTGGGGAGCAAAGCTGTTGGGA
TGCCCTCCCCTGTTTCTCCAAAGCTGTCACCAGGCAATTCTGGAAGTTACTCTTCTGGGGGAAG
TAGTGCTTCAGCAAGTGGTTCTTCGGTGACCATTCCACAGAAAATCCACCAGATGGCAGCAAGC
TATGTCCAGGTTACATCTAACTTCCTCTATGCCACAGAAATTTGGGACCAAGCTGAACAGCTTT
CCAAAGAACAAAAAGAATTCTTTGCTGAACTGGACAAAGTGATGGGCCCTCTCATCTTTAATGC
AAGCATCATGACAGATCTGGCTCGTTACACCCGGCAGGGACTGCATTGGCTTCGGCAGGATGCC
AAGCTGATATCTTGAACTGAACATACTCTCGTTGCCTCTGATTTTTTCCACAACACTGTGTCCC
ATCACAAAGGAAAACTGCCATGACACACACCTAGTCGACACTAAGAATGAGGACTGGTTCTCTC
CTCTGGTTCATGTTGTTGTTTCTATAGCCCAAAGCCATCTAATCAATTGACCCTTTCAATATTT
CTAATGTGACTAGTATTTAAATGTTCTAAACATGCAGTACATCACAAGATGGTTTTAGTAATTG
GAATTCCAGTTGCAATTCATAAATAATCAAGTAAAATTCTATTTATTTTCATTTTTCAAGTTCC
CAGATTGGAGCTTGTTTAAAGCTTAGTATTTCTGCCTATAAATTTATTCTGTTGAATATTTAGC
ATAAATTTAATGTAAGCATTTTATTTATATATTTTGGGAGCTGTGTTACTTAATGTCTTCTAAG
ATAAGAGTTGGCTTGTCCAAGACAGGACTTGTTCTTTCTACAGCTACTCACCTGTGTTCTTTTA
AGTCTTACTACAGTTCCACTATTGTAGGGTTTATGCTTGATATTGAGGATGCTCTTCACATGTG
AAAAGTCATTTAAGCATGAGGAGATGGCATTCTACATGGGTGCAGAGATGGGGTGGGTCTGGTT
TGGTATGCATTATTTCGAAACTGTGAATGTGTGTTGGTAACACTAGCACTCACAAGGTGACTAC
ATTGCATCTAATGCATTACAGAAAGCAGATTGCTAGGGAGGCACGTGATGCTGCATGGCTCCTA
AAGGACAATCTTAAACTATGAGCTCATTAAACCTTCTATTCCTTTTTGTTTTACTCATTTGACA
CTTCACTGAAACAGAGTAAGTTACTCCTAAAAACAGTGGCCCAGTTTCTGAAGGCTGCAGCCTG
TATTCATTGATAATGTCTGCAGATTTCCCCTATGGTGGAGAGATTGTGATGCTCAGATATGACA
GTGCAGTAGTAACTGGAGCTGAAAGGAGGTGTCCCAGTGTTTTAATGTGGAGATAATGAATTTC
GCTTTCCAAAGATCCTCATCAACGATGGACACTTTTGACAGGATTGTAAAACTCACAGTAGCAG
CTGGGCATGGTTGTGCATGTCTGTAATCCCAGCACTGGGAAGTGATGACAGGAGGGTCAGGAGG
TCAGGGTCATCCTCAAGCTACATAAAGCTAGACAGTGAGTTTGGGGCTAGCCTGAGCTACATGA
TCCCTCGTCACATTAAAGAAAGAAAGAAAATATACTAGAAAAATATGTAACTTAGCTCAATATG
AGCTTTCTTGGAAAGGGGGAAGTAATAGGGATAGTGCTTAGGAAGCCAGCTCTGTAACAATTCC
TTATCAAACTACTGTTCCCGACAAGGTGCGTATAGCAGGGAAGGGCAAGGAATGTCTCTCTTCC
TCTATACTTCTTTTTAGTGACCCCCGTCATGTCTGGTGTGCCTTAAATCTTAACTTTAAATGAT
AACTCTATGGATTGTTTACAGATAAAGTTTTATGCTGGGACCAGATTAGCCATGCATGGTTGGT
CCTCTACAATAATAATTTCAAATTCTCTTTGATTTTAAATCTTCCTTTAGAGACACATTAAAAT
AGATTCCTTCAGAAAAGCTAGTACTTTGATATCTGACTTAGTGTAATCAATTGGGTATAATGCT
GCTTCAAAAATGGCTTTTCCTTCTCATTCCAAAAATTCATCCAATTAGGGAAAAGTTCCCTCTT
AATAGCAGTTGATTATTGAGACTTGAATGGAACAGGGGAAAGAGGGCTAGAAATCTTCCCTGCT
CCCCTTCACTGCCTGCTCCTGAAGATAGTGAGCTTTGGCCTGCAGTCTCATAGTTACAGAGCTT
AACTGCTTTGTGTCTCATTGTTTTTACATAGTGTTGAGGGTTGATATCTACAGCTTATGCTGAA
TTTAACACTTTTCCCTTGAAGAAATTGCCTCTGTACCTTTCTAGTTTAATCATAGTGTATTTAA
GGAATACTTCTTCAGAGGCCGTTGTTTCCTCTCGTGCTAGTAACCTCCGTGGTCTAACAGTTGT
GTGTCCTGTCCTTGCCTCTTCTCTCTCATGCTGGCTCCTTAATTTCAGGGAGGTCTTAGAAGTA
GAACAAGCGCCCTCTATGCTTTCAGCCTTCAGCAGCTGCAGTGCTGGGGCTCTGCTTTCCAGCT
CTGGTCTGTGTGCAGCACACTCTAGAGTGGCTCTGACTCGTGTTAAAGCAGAGTTTCCTACATG
TTTATGGTGCTGCTTTAAGATGTTTTCTCTTTAAAACTGTCAATTCTTGGAGAATGAAACTGTT
AAACCTTTCATTGTGGAGGATTTTCCTCACCAGGTAGAAATGGGCAATGGATCAAAATCCGATC
CTAAGTGATTTGATGTCATAGTGTGTGAGACTATACACTCTTTGTGTCTCTTCTCAGATGTTTT
GTCTCAGTCTTGTTCAGCACATACCTTACTCCTTTACAAGTGATCACTCCCCCCTCTCAGTAGG
CACCCTTGGTGTGTTTTAGCCATTGAAAGATGATTTGACAAGTGGCTACAAACCTAGTCTGAAG
CTTGCACTCACTGTGTAGTTAGGGATAGAAATAGCAGCTGTCATTAATACTCAGTTCACTGCTC
TGAAGATCACATTTCTGTGCCAGGAGGCAGCAGCATGCACCATTGGACTCTGGGCAGGCATCTC
ACACCTGTCACAGTGGTCCTGCCTGGGAGAGGCTGGGCTATGGGGAGCACTCCCCTCCAGGCAT
TCAAGATTACACAGCCTAGCCCATGTCCCATTCTGGCTGGAGAGCACCCAGCCCTTTCCTTGCT
CAGTGACACATTTTTTCTGGGCAAAAAGCTATGAAGTCACTTTATTACCAGTAAGTGCTTCAAA
TAAAGTCACAGATATAGCCGCTAAAGGGAGAAGATTGACCACTACTGACTTAATTCTCCACTAT
AAAAGCAGTTCAGAGTCGGGTGTACATGCGTCCACATTGCTGCTGTTGCTGCTGTTGGTTTTTT
CTGGGAAGCTCTTACACTAGGGATTTATAGGCATCTGGGCTGCACTTTGAATGACACACTTGTG
GCTTTAGAGTCGCTGTTGTTCTTTTGTTTTAAAATTGTTCTTCGTTTCTTTTCATTAAAGGTTT
AATCAGCTAGATTAGAGAGCATCATTTGTATTTAACAGCTGAAACTTCGGTACGTTGCCGTTTA
ATGAATGAACTTGCATTGTGTAGCCAGGGCCTACAAAGGCTCTTGTCAGGAATACAAGCACTGC
CTGGGGCTGGTGCTCAGAGGAGTTTTCAGTGCAACCAGTAATAGCTCCATTGGGTGATGCCTAG
CTCAGTTGAGAAGGGGGATGCTGTACACTTCTAGGTATGAGGGTATGCGACTTTGGATCTTAAA
ATTATGTACACATACACACTTTATATATATGTACGTATGTATGTATGAAAACATGGAATTAGTT
TGTCAAAATGTGTGTGTTTAGTATTTTAGCTTAGTGCAACTATTTCCACATTATTTATTAAATT
GATCTAAGACACTTTGTTCTTGGCACCTTGAATATTAACATTCAAGGATGCAATGTGTATTCCT
TTAGATTGTTAAAGCTTAATTACTATGATTTGTAGTAAATTAACTTTTGAAATCTATTTGAGCC
CTTCTGTAGTATAATAGGGCTCTTACAGGGTGGGAAAGATTTTAATTTTCCAATAGCTAATTGA
ACAAAATGGCTTCATTGTATATTTTGATTTATAGGAGTCTGTAGGTGTCTGGGTCCCAAGGACA
TCTACTGAGGATGACTGTTTTAGGTGGGTGGAATGGTGTTTAGACTATACCTAAGTGACTTGGA
AAGCCAGAGCACCTTGTTCAAATCCAGACTCCTGTAACTCCTATTCTTCCAGGATGTGGAACAC
AAATCCCGCCCAGCTTCACATTTCAATTAGAGAGGCAGACTTCTTTTCCAGTAATATTGTACAC
CTAGTGTTGCTATGAGTGAAATCAGTAGGAAAAAGTACTGAATGAGGGTCTGGGACGATGCACT
GACCTGGCCAGCTGTCACACCTGTAAATGTACCTTTCCCATGCCTACCAGTGGAGGCATTCAGA
CCAGAAAAGCAAGCCAGCAAGTAACATTCTTAAGGTTAGAGAAAGCCAGTTGTGCTGCTGCATA
CCCTGAGACAAAGAGCATCCTTTGCCAGATAGAGAGCCTGAGACACCAGGCCACTCTCCACAAA
CTAGATACATTTAAAAGTTACTCGGTCAACCAGGTGTGGTAGTGCATGCTTTAGTTCTAGTGCT
TGGACTGGCAGCTCGAGACCAGCATGCACCACCCAGACGTCTCCCTGTGAGAAGAGCAAAGTGG
AGTAAGAGGATGCTGGCCTGCAGAACTGTTTACATGACCCCTTGGTTGATGAAAAAGAACCTGC
CGTTTGCAGACCCAGGGGACAGAAAAGAAGCTACGCTTGCCTTGTGAATGGCGTTTAGAACAAG
GTGTTCAGGTGAAGTCTCAGTAGCCAGAGGTTTCAGCAGCTTCAATTGCTAACATTTAAGAAGT
TGATTTTCAGGAATGTCTGCATGCGCCTCTCCTTGCTGTCATTGATCAGCTCAGCAGAATCATC
ATCCTTAAATATGGAGAAAGCTCTCAGATGAACGTGGACAAGCTCCTACCCAGAAACCCTAACC
ATACTTGGTTTTGACTGTGCTGCTTCTGTGTGAGGTTTCTTCTCAGCTTTTAGCCACTGGGGTT
TTCTGCCTGTTCTGTACCTCTCTGGAAGATGTCGATTTGGAAGTGCTGCCTTTCAAACCAGTGC
CACAGCGTCCGTATGGTTGAGCTTGTCGCTGATTCAGAGGTGTCCCCATTATGCTCACACCTGG
CACATCACTGATGTGAGCATTTGACAGTACGTGGGCGAGGGTAGGGGTGGCGCTAGCCAACAGC
GCTGGCTTAATTGGCAGGGCCTGCAAAGGCCCCACTTGAGGGCCAGACACTAGGTTGGTTAAGC
ACAGTTAGGGAAATTTCTACCTAGCCTCCGTTTTGAATGACTCTGAGAAATTTTATATATGGAG
GATGGAAATGCGTATATATTTATTGAAGATCTTTTTATTTGAAATTAAAATCCTTTGGTAAATA
ATGGTTTGATATTTGGGGAGGGTTTTGGAGGGGAAGTAACACAGTTGATAAAGTACAGGCCTGG
TGACTCTTCTGAAAGGCTCTGTTGCTGGTAGGAGAGGCCTTTATCTTGTACATGATCCAAGCGT
TGTCTTATGTTTCTTTTATCCAAAATATCTAGGCATCTGACACTTTGAACCAAAATTTCAATTG
TATACTGTGATTTTTATTTGTTGCAATATGTTAAATTTCAGAGGTACTTTGGGGCTCAAAAGCT
AGGGTTTCTAAGTCAGTATGTGCATTCACATAACGAGCTGTTAATGGTGAGCAAAGTATTACAT
ACTAACTAGATTTTCCACATCTGTATAGTATATTATATGTATTTTGTGGTATCGAGATTATAGA
GAGTTTAGAGTGTCAAACATGCGTTTAATGTGTATTTTTAAACAAATTTATGGCAATTAAAATA
TTTGGAGACAAGGGTATCACATTTCAATTTGTAAAACTCTTTTTAACTCTACTGTGTCATTATG
ATGCTTTGTATAATGCCAAACCATAGCTGGAGAAACTAAGTTTAATAAATATCAGATAGCTTTT
CTGTATAACGTTTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001100471	(Get FASTA)	NCBI Sequence Viewer
	XP_006246325	(Get FASTA)	NCBI Sequence Viewer
	XP_006246326	(Get FASTA)	NCBI Sequence Viewer
	XP_008765906	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM04379	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009440
	ENSRNOP00000009440.7
	ENSRNOP00000086504
	ENSRNOP00000086504.1
	ENSRNOP00000088228
	ENSRNOP00000088228.1

RefSeq Acc Id:

NP_001100471 ⟸ NM_001107001

- UniProtKB:

A6HEC4 (UniProtKB/TrEMBL), A0A8I6GGV9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMKD
YIGDRSIPKLVAIPKPAVPTTTDEKANPNFFEQRHGGSHQSSKWTPVGPAPSTSQSQKRSSGLQ
SGHSSQRSSAGGSGASGSGQRHDRDSYSSSRKKGQHGSEHSKSRSSSPGKPQAVSSLSSSHSRS
HGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSSQSFPPSLMSKSSSMLQKPTAYVRPMD
GQESVEPKLSSEHYSSQSHGSNMTELKPSSKAHLTKLKIPSRPLDASVSGDVSCVDEILKEMTH
SWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGSGEQKRYSTSAKTSNGHQSKSMLKDDLKLSS
SEDSDGEQDCDKTMPRSTPGSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSAS
PEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQAYKKEGREQGTASNYTDPGGAKEAS
SATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKKTEKSAAEEPRGGLKIESETP
VDMATSMPSSRHKAATKGSRKPNIKKESKSSPRPTAEKKKYKSASKSSQKSREIIETDSSSSDS
DERESLPPSSQTPKYPESNRTPVKPSSAEEDDSFFRQRMFSPMEEKELLSPLSDPDDRYPLIVK
IDLNLLTRIPGKPYKETEPPKGEKKNVPEKHSREVQKQASEKASNKGKRKHKNDDDNRASESKK
PKTEDKNSSAHKPSSSKESSKQSSTKEKDLLPSPAGPVPSKDSKTEHGSRKRTVSQSSSLKSSS
TSNKENSGSSKSTSSTAKQKKTEGKVSSSSKEAKEKAPNSSSNCPPSTPTPDSSKPRRTKLAFD
DRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSDT
VELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKENALKYSKTLTEHLKNSYS
NSQAPSPGLGSKAVGMPSPVSPKLSPGNSGSYSSGGSSASASGSSVTIPQKIHQMAASYVQVTS
NFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASIMTDLARYTRQGLHWLRQDAKLIS

hide sequence

RefSeq Acc Id:	XP_006246325 ⟸ XM_006246263
- Peptide Label:	isoform X1
- UniProtKB:	D3ZSX2 (UniProtKB/TrEMBL), A0A8I6GGV9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMKD YIGDRSIPKLVAIPKPAVPTTTDEKANPNFFEQRHGGSHQSSKWTPVGPAPSTSQSQKRSSGLQ SGHSSQRSSAGGSGASGSGQRHDRDSYSSSRKKGQHGSEHSKSRSSSPGKPQAVSSLSSSHSRS HGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSSQSFPPSLMSKSSSMLQKPTAYVRPMD GQESVEPKLSSEHYSSQSHGSNMTELKPSSKAHLTKLKIPSRPLDASVSGDVSCVDEILKEMTH SWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGSGEQKRYSTSAKTSNGHQSKSMLKDDLKLSS SEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSE ANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQAYKKEGREQGTASNYT DPGGAKEASSATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKKTEKSAAEEPRG GLKIESETPVDMATSMPSSRHKAATKGSRKPNIKKESKSSPRPTAEKKKYKSASKSSQKSREII ETDSSSSDSDERESLPPSSQTPKYPESNRTPVKPSSAEEDDSFFRQRMFSPMEEKELLSPLSDP DDRYPLIVKIDLNLLTRIPGKPYKETEPPKGEKKNVPEKHSREVQKQASEKASNKGKRKHKNDD DNRASESKKPKTEDKNSSAHKPSSSKESSKQSSTKEKDLLPSPAGPVPSKDSKTEHGSRKRTVS QSSSLKSSSTSNKENSGSSKSTSSTAKQKKTEGKVSSSSKEAKEKAPNSSSNCPPSTPTPDSSK PRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESK SPFPMYSDTVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKENALKYSKTL TEHLKNSYSNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGSYSSGGSSASASGSSVTIPQKIHQM AASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASIMTDLARYTRQGLHWLR QDAKLIS hide sequence

RefSeq Acc Id:	XP_006246326 ⟸ XM_006246264
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6GE44 (UniProtKB/TrEMBL), A0A8I6GGV9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMKD YIGDRSIPKLVAIPKPAVPTTTDEKANPNFFEQRHGGSHQSSKWTPVGPAPSTSQSQKRSSGLQ SGHSSQRSSAGGSGASGSGQRHDRDSYSSSRKKGQHGSEHSKSRSSSPGKPQAVSSLSSSHSRS HGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSSQSFPPSLMSKSSSMLQKPTAYVRPMD GQESVEPKLSSEHYSSQSHGSNMTELKPSSKAHLTKLKIPSRPLDASVSGDVSCVDEILKESQQ SNFGSGEQKRYSTSAKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHN SEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKV NPHKVSPASSVDSNIPSSQAYKKEGREQGTASNYTDPGGAKEASSATPGRDSKTIQKGSESGRG RQKSPAQSDSTTQRRTVGKKQPKKTEKSAAEEPRGGLKIESETPVDMATSMPSSRHKAATKGSR KPNIKKESKSSPRPTAEKKKYKSASKSSQKSREIIETDSSSSDSDERESLPPSSQTPKYPESNR TPVKPSSAEEDDSFFRQRMFSPMEEKELLSPLSDPDDRYPLIVKIDLNLLTRIPGKPYKETEPP KGEKKNVPEKHSREVQKQASEKASNKGKRKHKNDDDNRASESKKPKTEDKNSSAHKPSSSKESS KQSSTKEKDLLPSPAGPVPSKDSKTEHGSRKRTVSQSSSLKSSSTSNKENSGSSKSTSSTAKQK KTEGKVSSSSKEAKEKAPNSSSNCPPSTPTPDSSKPRRTKLAFDDRNYSADHYLQEAKKLKHNA DALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSDTVELIKYTMKLKNYLAPDATA ADKRLTVLCLRCQSLLYLRLFKLKKENALKYSKTLTEHLKNSYSNSQAPSPGLGSKAVGMPSPV SPKLSPGNSGSYSSGGSSASASGSSVTIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQK EFFAELDKVMGPLIFNASIMTDLARYTRQGLHWLRQDAKLIS hide sequence

RefSeq Acc Id:	XP_008765906 ⟸ XM_008767684
- Peptide Label:	isoform X1
- UniProtKB:	D3ZSX2 (UniProtKB/TrEMBL), A0A8I6GGV9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMKD YIGDRSIPKLVAIPKPAVPTTTDEKANPNFFEQRHGGSHQSSKWTPVGPAPSTSQSQKRSSGLQ SGHSSQRSSAGGSGASGSGQRHDRDSYSSSRKKGQHGSEHSKSRSSSPGKPQAVSSLSSSHSRS HGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSSQSFPPSLMSKSSSMLQKPTAYVRPMD GQESVEPKLSSEHYSSQSHGSNMTELKPSSKAHLTKLKIPSRPLDASVSGDVSCVDEILKEMTH SWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGSGEQKRYSTSAKTSNGHQSKSMLKDDLKLSS SEDSDGEQDCDKTMPRSTPGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSE ANEPSQSASPEPEPPPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQAYKKEGREQGTASNYT DPGGAKEASSATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKKTEKSAAEEPRG GLKIESETPVDMATSMPSSRHKAATKGSRKPNIKKESKSSPRPTAEKKKYKSASKSSQKSREII ETDSSSSDSDERESLPPSSQTPKYPESNRTPVKPSSAEEDDSFFRQRMFSPMEEKELLSPLSDP DDRYPLIVKIDLNLLTRIPGKPYKETEPPKGEKKNVPEKHSREVQKQASEKASNKGKRKHKNDD DNRASESKKPKTEDKNSSAHKPSSSKESSKQSSTKEKDLLPSPAGPVPSKDSKTEHGSRKRTVS QSSSLKSSSTSNKENSGSSKSTSSTAKQKKTEGKVSSSSKEAKEKAPNSSSNCPPSTPTPDSSK PRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESK SPFPMYSDTVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKENALKYSKTL TEHLKNSYSNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGSYSSGGSSASASGSSVTIPQKIHQM AASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNASIMTDLARYTRQGLHWLR QDAKLIS hide sequence

Ensembl Acc Id:

ENSRNOP00000009440 ⟸ ENSRNOT00000009440

Ensembl Acc Id:

ENSRNOP00000086504 ⟸ ENSRNOT00000117466

Ensembl Acc Id:

ENSRNOP00000088228 ⟸ ENSRNOT00000114150

Protein Domains

AF4/FMR2 C-terminal homology

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZSX2-F1-model_v2	AlphaFold	D3ZSX2	1-1150	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697174

Promoter ID:

EPDNEW_R7699

Type:

multiple initiation site

Name:

Aff4_1

Description:

AF4/FMR2 family, member 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	38,692,268 - 38,692,328	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311694	AgrOrtholog
BioCyc Gene	G2FUF-25145	BioCyc
Ensembl Genes	ENSRNOG00000006965	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009440	ENTREZGENE
	ENSRNOT00000009440.7	UniProtKB/TrEMBL
	ENSRNOT00000114150	ENTREZGENE
	ENSRNOT00000114150.1	UniProtKB/TrEMBL
	ENSRNOT00000117466	ENTREZGENE
	ENSRNOT00000117466.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.250.2670	UniProtKB/TrEMBL
InterPro	AF-4	UniProtKB/TrEMBL
	AF4/FMR2_C	UniProtKB/TrEMBL
	AF4_int	UniProtKB/TrEMBL
KEGG Report	rno:303132	UniProtKB/TrEMBL
NCBI Gene	303132	ENTREZGENE
PANTHER	AF-4	UniProtKB/TrEMBL
	AF4/FMR2 FAMILY MEMBER 4	UniProtKB/TrEMBL
Pfam	AF-4	UniProtKB/TrEMBL
	AF-4_C	UniProtKB/TrEMBL
	AF4_int	UniProtKB/TrEMBL
PhenoGen	Aff4	PhenoGen
RatGTEx	ENSRNOG00000006965	RatGTEx
UniProt	A0A8I6GE44	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GGV9	ENTREZGENE, UniProtKB/TrEMBL
	A6HEC4	ENTREZGENE, UniProtKB/TrEMBL
	D3ZSX2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-07-05	Aff4	ALF transcription elongation factor 4	Aff4	AF4/FMR2 family, member 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Aff4	AF4/FMR2 family, member 4	Aff4_predicted	AF4/FMR2 family, member 4 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Aff4_predicted	AF4/FMR2 family, member 4 (predicted)	Laf4l_predicted	lymphoid nuclear protein related to AF4-like (predicted)	Symbol and Name updated	1299863	APPROVED
2005-01-12	Laf4l_predicted	lymphoid nuclear protein related to AF4-like (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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