Pigh (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 6 | 103,601,369 - 103,630,214 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 97,874,903 - 97,897,188 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 97,882,903 - 97,897,142 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 98,317,103 - 98,326,561 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 98,616,255 - 98,625,713 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 98,002,941 - 98,012,398 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 102,258,621 - 102,272,826 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 102,263,337 - 102,272,777 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 111,628,229 - 111,642,457 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 101,713,237 - 101,722,655 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 101,718,465 - 101,726,103 (-) | NCBI | | | | | Celera | 6 | 96,274,098 - 96,283,539 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q24 | NCBI | | | | |
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PIGH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 14 | 67,589,306 - 67,600,301 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 67,581,955 - 67,600,286 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 14 | 68,056,023 - 68,067,018 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 67,125,776 - 67,136,770 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 67,125,783 - 67,136,731 | NCBI | | | | | Celera | 14 | 48,115,088 - 48,126,092 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q24.1 | NCBI | | | | | HuRef | 14 | 48,225,764 - 48,236,772 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 67,994,670 - 68,005,668 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 61,796,426 - 61,807,421 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Pigh (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 12 | 79,127,443 - 79,136,478 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 12 | 79,127,438 - 79,136,425 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 12 | 79,080,669 - 79,089,753 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 12 | 79,080,664 - 79,089,651 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 12 | 80,181,656 - 80,190,657 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 12 | 79,999,509 - 80,008,510 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 12 | 80,545,145 - 80,554,146 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | C3 | NCBI | | | | | cM Map | 12 | 35.51 | NCBI | | | | |
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Pigh (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955466 | 2,601,394 - 2,616,255 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955466 | 2,601,368 - 2,616,255 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PIGH (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 15 | 68,690,464 - 68,708,665 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 67,906,976 - 67,925,166 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 48,160,062 - 48,178,253 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 67,038,092 - 67,056,371 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 67,045,451 - 67,056,371 (-) | Ensembl | panpan1.1 | | panPan2 | |
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PIGH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 8 | 41,557,773 - 41,565,309 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 41,557,771 - 41,565,279 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 41,249,937 - 41,258,378 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 41,785,457 - 41,793,898 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 41,786,188 - 41,793,866 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 8 | 41,404,233 - 41,412,663 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 41,477,859 - 41,486,301 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 41,837,330 - 41,845,767 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pigh (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 63,212,066 - 63,257,258 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936495 | 10,969,364 - 10,979,620 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936495 | 10,971,448 - 10,979,622 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PIGH (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 7 | 91,306,121 - 91,316,278 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 91,306,119 - 91,316,348 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 97,612,379 - 97,622,603 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PIGH (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 24 | 44,790,528 - 44,848,870 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 24 | 44,838,242 - 44,848,598 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666053 | 33,020,600 - 33,078,695 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pigh (Heterocephalus glaber - naked mole-rat) |
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