Advanced Search (OLGA)

Gene: Camta2 (calmodulin binding transcription activator 2) Rattus norvegicus

Analyze

Symbol:

Camta2

Name:

calmodulin binding transcription activator 2

RGD ID:

1311296

Description:

Predicted to enable several functions, including DNA binding activity; histone deacetylase binding activity; and transcription coactivator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within cardiac muscle hypertrophy in response to stress and positive regulation of transcription by RNA polymerase II. Predicted to be located in chromatin. Predicted to be active in nucleus. Orthologous to human CAMTA2 (calmodulin binding transcription activator 2); INTERACTS WITH 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

calmodulin-binding transcription activator 2; LOC287462

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CAMTA2 (calmodulin binding transcription activator 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Camta2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Camta2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CAMTA2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CAMTA2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Camta2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CAMTA2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CAMTA2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Camta2 (calmodulin binding transcription activator 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	CAMTA2 (calmodulin binding transcription activator 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Camta2 (calmodulin binding transcription activator 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Camta	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Camta	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	camt-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	camt-1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	camta2	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	55,882,071 - 55,900,575 (-)	NCBI		GRCr8
GRCr8 Ensembl	10	55,882,071 - 55,900,179 (-)	Ensembl		GRCr8 Ensembl
mRatBN7.2	10	55,383,450 - 55,401,838 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	55,383,450 - 55,401,558 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	60,064,109 - 60,082,109 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	59,552,616 - 59,570,616 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	55,051,723 - 55,069,723 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	57,291,192 - 57,309,638 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	57,291,192 - 57,309,298 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	57,036,786 - 57,055,094 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	57,549,855 - 57,567,958 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	54,529,008 - 54,547,113 (-)	NCBI		Celera
RGSC_v3.1	10	57,563,476 - 57,581,579 (-)	NCBI
Cytogenetic Map	10	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

congenital myasthenic syndrome 4A (ISO)

spastic ataxia 2 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

buta-1,3-diene (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

cyclosporin A (ISO)

diazinon (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

fenthion (ISO)

fonofos (ISO)

fulvestrant (ISO)

gentamycin (EXP)

inulin (ISO)

manganese(II) chloride (EXP)

methamphetamine (ISO)

methidathion (ISO)

N-methyl-4-phenylpyridinium (EXP)

ozone (ISO)

p-toluidine (EXP)

parathion (ISO)

perfluorooctane-1-sulfonic acid (ISO)

quercetin (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

tamibarotene (ISO)

terbufos (ISO)

testosterone (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cardiac muscle hypertrophy in response to stress (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

Cellular Component

chromatin (IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

chromatin binding (IEA,ISO)

DNA binding (IEA)

double-stranded DNA binding (IBA)

histone deacetylase binding (IEA,ISO)

protein binding (ISO)

sequence-specific DNA binding (IEA,ISO)

transcription coactivator activity (IEA,ISO)

transcription coregulator activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:16678093	PMID:25049392

Genomics

Comparative Map Data

Camta2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	55,882,071 - 55,900,575 (-)	NCBI		GRCr8
GRCr8 Ensembl	10	55,882,071 - 55,900,179 (-)	Ensembl		GRCr8 Ensembl
mRatBN7.2	10	55,383,450 - 55,401,838 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	55,383,450 - 55,401,558 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	60,064,109 - 60,082,109 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	59,552,616 - 59,570,616 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	55,051,723 - 55,069,723 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	57,291,192 - 57,309,638 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	57,291,192 - 57,309,298 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	57,036,786 - 57,055,094 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	57,549,855 - 57,567,958 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	54,529,008 - 54,547,113 (-)	NCBI		Celera
RGSC_v3.1	10	57,563,476 - 57,581,579 (-)	NCBI
Cytogenetic Map	10	q24	NCBI

CAMTA2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	4,967,997 - 4,987,675 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	4,967,992 - 4,987,675 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	4,871,292 - 4,890,970 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	4,812,017 - 4,831,655 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	4,812,016 - 4,831,655	NCBI
Celera	17	4,886,098 - 4,905,775 (-)	NCBI		Celera
Cytogenetic Map	17	p13.2	NCBI
HuRef	17	4,758,910 - 4,778,803 (-)	NCBI		HuRef
CHM1_1	17	4,880,598 - 4,900,277 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	4,858,321 - 4,878,006 (-)	NCBI		T2T-CHM13v2.0

Camta2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	70,560,288 - 70,578,966 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	70,560,289 - 70,578,931 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	70,669,463 - 70,688,145 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	70,669,463 - 70,688,105 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	70,482,968 - 70,501,436 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	70,485,661 - 70,504,129 (-)	NCBI		MGSCv36	mm8
Celera	11	78,220,399 - 78,238,873 (-)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	43.21	NCBI

Camta2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	10,375,017 - 10,392,363 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	10,375,017 - 10,391,546 (-)	NCBI	ChiLan1.0	ChiLan1.0

CAMTA2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	12,577,938 - 12,598,550 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	14,546,302 - 14,566,459 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	5,016,065 - 5,036,216 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	5,003,898 - 5,024,036 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	5,004,607 - 5,024,238 (-)	Ensembl	panpan1.1		panPan2

CAMTA2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	31,632,064 - 31,657,537 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	31,631,838 - 31,657,792 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	31,781,327 - 31,795,878 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	31,746,735 - 31,761,285 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	31,747,049 - 31,761,286 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	31,713,272 - 31,727,822 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	31,673,027 - 31,687,545 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	31,849,362 - 31,863,912 (+)	NCBI		UU_Cfam_GSD_1.0

Camta2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	53,153,567 - 53,168,758 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936677	2,730,874 - 2,747,406 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936677	2,732,223 - 2,747,408 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CAMTA2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	51,931,802 - 51,948,705 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	51,931,794 - 51,948,703 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	54,000,816 - 54,017,405 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CAMTA2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	4,448,126 - 4,468,616 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	4,447,849 - 4,467,159 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666059	17,163,552 - 17,184,382 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Camta2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	8,820,170 - 8,836,703 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	8,820,062 - 8,836,711 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Camta2
271 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	97
Count of miRNA genes:	79
Interacting mature miRNAs:	87
Transcripts:	ENSRNOT00000056622
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61441	Btemp1	Thermal response to stress QTL 1	4		body temperature trait (VT:0005535)	core body temperature (CMO:0001036)	10	35893451	64140567	Rat
1549846	Scl47	Serum cholesterol level QTL 47	3.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	10	51071897	96071897	Rat
152025229	Scl83	Serum cholesterol level QTL 83	4.33		blood cholesterol amount (VT:0000180)		10	36211556	69161158	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	10	31796281	76796281	Rat
152025227	Bw195	Body weight QTL 195	5.73		body mass (VT:0001259)		10	47489017	69161158	Rat
631564	Apr3	Acute phase response QTL 3	3.9		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	10	15776754	60776754	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	10	27023535	98502431	Rat
2293669	Bmd33	Bone mineral density QTL 33	4.5	0.0001	femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	10	27443787	72443787	Rat
152025224	Bw193	Body weight QTL 193	6.47		body mass (VT:0001259)		10	52162433	75582749	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	0.0002	aorta elastic tissue integrity trait (VT:0010556)	artery internal elastic lamina non-tumorous lesion count (CMO:0001913)	10	35509383	91417879	Rat
631554	Bp133	Blood pressure QTL 133		0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	1250554	64349221	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293679	Bmd30	Bone mineral density QTL 30	3.5	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
1298078	Stresp5	Stress response QTL 5	2.99	0.00025	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	10	42546145	107713808	Rat
1578762	Toxo1	Toxoplasma gondii resistance QTL 1			brain integrity trait (VT:0010579)	percentage of study population displaying Toxoplasma gondii brain cysts at a point in time (CMO:0002028)	10	52699004	59876693	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	10	19939207	64939207	Rat
61332	Eau3	Experimental allergic uveoretinitis QTL 3		0.004	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	18035782	63035782	Rat
70164	Bw21	Body weight QTL 21	4.36	0.00005	body mass (VT:0001259)	body weight (CMO:0000012)	10	54296336	99451733	Rat
61463	Bp12	Blood pressure QTL 12	6.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	41831278	86831278	Rat
1579919	Bp281	Blood pressure QTL 281		0.01	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50464802	95464802	Rat
8694173	Bw149	Body weight QTL 149	4.38	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	10	44939359	89939359	Rat
2300218	Hpcl2	Hepatic cholesterol level QTL 2			liver cholesterol amount (VT:0010498)	liver cholesterol level (CMO:0001597)	10	45529164	96099749	Rat
70171	Cari1	Carrageenan-induced inflammation QTL 1	4.9	0.0005	hypodermis integrity trait (VT:0010550)	inflammatory exudate volume (CMO:0001429)	10	54296227	107713808	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	10	18668419	63668419	Rat
1581497	Esta1	Estrogen-induced thymic atrophy QTL 1			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	10	21833758	61843633	Rat
10450493	Bp382	Blood pressure QTL 382		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50860288	95860288	Rat
724527	Bp148	Blood pressure QTL 148		0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	28950353	73950353	Rat
1358897	Stresp6	Stress response QTL 6	4.17	0.022	blood norepinephrine amount (VT:0005663)	plasma norepinephrine level (CMO:0001010)	10	35893263	64653589	Rat
1331762	Rf40	Renal function QTL 40	3.873		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	10	29800910	64653589	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	10	27443787	72443787	Rat
61354	Pia10	Pristane induced arthritis QTL 10		0.01	joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	10	14991535	86964295	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.864		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	1	42823274	87823274	Rat
9589030	Epfw9	Epididymal fat weight QTL 9	19.24	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	10	44939359	89939359	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	10	14991535	107556066	Rat
2293652	Bmd22	Bone mineral density QTL 22	4.9	0.0001	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	10	27443787	72443787	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	42823274	87823274	Rat
2306787	Ean3	Experimental allergic neuritis QTL 3	3.1		nervous system integrity trait (VT:0010566)	body weight loss (CMO:0001399)	10	54296227	67476781	Rat
724556	Pur2	Proteinuria QTL 2	5.5		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	10	22931373	91127454	Rat
8662860	Vetf10	Vascular elastic tissue fragility QTL 10			artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	10	6660923	73950353	Rat
2306792	Ean4	Experimental allergic neuritis QTL 4	4		nervous system integrity trait (VT:0010566)	IFNG-secreting splenocyte count (CMO:0002122)	10	49495492	94495492	Rat
61387	Bp1	Blood pressure QTL 1	5.1		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	52269185	107713808	Rat
1354585	Eae18a	Experimental allergic encephalomyelitis QTL 18a	7.5	0.0004	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	10	54296227	58944345	Rat
70223	Bp57	Blood pressure QTL 57	5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	14653541	59653541	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	10	15533012	73695498	Rat
634329	Pia15	Pristane induced arthritis QTL 15	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	24662123	73695339	Rat
70224	Eae3	Experimental allergic encephalomyelitis QTL 3	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	10	27023535	61843633	Rat
2298480	Eau7	Experimental allergic uveoretinitis QTL 7		0.0049	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	10	35509383	80509383	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	10	29800910	91417879	Rat
2298495	Eae23	Experimental allergic encephalomyelitis QTL 23	16.93		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis duration (CMO:0001424)	10	16175525	61175525	Rat
2313087	Bmd80	Bone mineral density QTL 80	3.2	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	10	20110614	65110614	Rat
631530	Tls3	T-lymphoma susceptibility QTL 3	0	0.0001	thymus integrity trait (VT:0010555)	percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)	10	27587226	96099902	Rat
2289985	Bp305	Blood pressure QTL 305			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	29076978	74076978	Rat
1354608	Cm33	Cardiac mass QTL 33	2.8		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	10	55307972	93608131	Rat
631532	Cm50	Cardiac mass QTL 50	6.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	10	18035782	63035782	Rat
8552805	Bw145	Body weight QTL 145	2.2		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	10	43608793	88608793	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	23948641	107713808	Rat
2293705	Bmd25	Bone mineral density QTL 25	7.1	0.0001	femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	10	27443787	72443787	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
1576308	Schws1	Schwannoma susceptibility QTL 1		0.0041	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	10	40535708	107713808	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	14991535	107713808	Rat
7207811	Bmd90	Bone mineral density QTL 90	5.2		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	10	49943710	94943710	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	31129113	76129113	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	40535708	107713808	Rat
7411614	Foco18	Food consumption QTL 18		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	10	44939359	89939359	Rat
631547	Bp87	Blood pressure QTL 87	4.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	47869129	92869129	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	10	6864618	96620484	Rat
12880050	Am10	Aortic mass QTL 10		0.016	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	10	39503487	84503487	Rat
2292436	Bp310	Blood pressure QTL 310			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	10	50604677	95604677	Rat
6893342	Cm78	Cardiac mass QTL 78	0.1	0.88	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	10	35509383	88177745	Rat
2313055	Bw96	Body weight QTL 96	3.6	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	10	20110614	65110614	Rat
631542	Bp82	Blood pressure QTL 82	6.8		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	10	27023535	99451848	Rat

Markers in Region

RH132691

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	10	55,402,015 - 55,402,201 (+)	MAPPER	mRatBN7.2
Rnor_6.0	10	57,309,756 - 57,309,941	NCBI	Rnor6.0
Rnor_5.0	10	57,055,350 - 57,055,535	UniSTS	Rnor5.0
RGSC_v3.4	10	57,568,414 - 57,568,599	UniSTS	RGSC3.4
Celera	10	54,547,571 - 54,547,756	UniSTS
Cytogenetic Map	10	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	11	49	113	91	90	59	25	59	6	218	97	11	93	45	60	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001105801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006246665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039085487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063268663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC119116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000056622 ⟹ ENSRNOP00000053461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	55,882,071 - 55,900,179 (-)	Ensembl
mRatBN7.2 Ensembl	10	55,383,450 - 55,401,558 (-)	Ensembl
Rnor_6.0 Ensembl	10	57,291,192 - 57,309,298 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095887 ⟹ ENSRNOP00000080026

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	55,882,071 - 55,900,179 (-)	Ensembl
mRatBN7.2 Ensembl	10	55,383,450 - 55,401,558 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109888 ⟹ ENSRNOP00000086530

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	55,882,071 - 55,900,179 (-)	Ensembl
mRatBN7.2 Ensembl	10	55,383,450 - 55,401,558 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116547 ⟹ ENSRNOP00000086676

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	55,882,071 - 55,899,512 (-)	Ensembl
mRatBN7.2 Ensembl	10	55,383,450 - 55,399,035 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117371 ⟹ ENSRNOP00000090701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	10	55,882,071 - 55,900,167 (-)	Ensembl
mRatBN7.2 Ensembl	10	55,383,450 - 55,401,546 (-)	Ensembl

RefSeq Acc Id:

NM_001105801 ⟹ NP_001099271

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,900,179 (-)	NCBI
mRatBN7.2	10	55,383,450 - 55,401,558 (-)	NCBI
Rnor_6.0	10	57,291,192 - 57,309,298 (-)	NCBI
Rnor_5.0	10	57,036,786 - 57,055,094 (-)	NCBI
RGSC_v3.4	10	57,549,855 - 57,567,958 (-)	RGD
Celera	10	54,529,008 - 54,547,113 (-)	NCBI

Sequence:

show sequence

GTTTGGGGTAGAATGGCCGCTGCCGCCGTCACCCGCGGGACCCCGGGAGCACAGACTCCCCCTC
CCCCCGGCCCCTCAGGCCGGGGGTGACCTTGCCCCCTGGAACCTTCACTATGAATACCAAGGAC
ACCACTGAGGTTGCTGAGAACAGCCACCACCTGAAGATCTTCCTCCCCAAGAAACTGCTGGAGT
GTCTTCCTCGATGCCCACTGCTGCCTCCAGAGCGGCTCCGATGGAATACAAATGAGGAGATTGC
ATCCTACCTGATCACCTTTGAGAAACATGATGAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCT
CAAAATGGCTCCATTATCCTCTACAATCGTAAGAAGGTGAAATACCGGAAGGATGGTTACCTTT
GGAAGAAGCGGAAAGATGGGAAGACTACCCGAGAAGACCACATGAAACTCAAGGTCCAGGGCAT
GGAGTGTCTCTATGGCTGCTACGTTCACTCTTCCATCGTCCCCACATTCCATCGGCGCTGCTAT
TGGCTGCTCCAGAACCCTGACATCGTCCTTGTGCACTACCTGAATGTCCCAGCCCTGGAGGATT
GTGGAAAGGGCTGTAGCCCCATCTTTTGTTCCATTAGTAGCGACCGGCGAGAATGGCTGAAGTG
GTCACGTGAGGAGCTATTGGGACAGCTGAAGCCCATGTTTCATGGCATCAAGTGGAGCTGTGGG
AATGGGTTGGAGGAATTCTCTGTGGAACAGTTGGTGCAGCAGATCTTGGACACCCATCCAACCA
AACCAGCACCCCGAACCCATGCTTGTCTCTGCAGTGGGGGCCTTGGTTCTGGGAGCCTTACCCA
CAAATGCAGTAGCACGAAACACCGCATCATCTCTCCTAAAGTGGAGCCTCGAGCTTTAACCTTG
GCTTCTATCTCCCACTCCAAGCCCCCTGAACCTCCACCACTGATAGCTCCACTTCCTCCCGAGC
TCCCCAAGGCACATACCTCCCCATCTTCCTCCTCTTCTTCCTCCTCCTCAGGATTTGCAGAACC
CCTAGAAATCAGACCTAGCCCTCCTACCTCTCGAGGGGGTTCATCTCGAGGAGGCACTGCCATT
CTTCTCCTAACGGGACTAGAGCAGCGTGCTGGGGGCCTGACACCCACCAGACACTTGGCTTCAC
AGGCTGAGCCTAGACCTCCTGTGAGCTTGGCTGTGGTTGTAGGTTCTGAGCCTTCTGCCCCGCC
AGCTCCTCCCAGCCCTGCCTTTGACCCTGATCGTTTTCTCAACAGTCCCCAAAGGGGCCAGACA
TATGGAGGGGGCCAAGGGGTGAATCCGGACTTCCCTGAGGCAGAGGGCACTCACACTCCCTGCC
CTGCCCTAGAACCTGCTGCTGCCTTGGAGCCCCAGGCCGCTGCACGGGGTCTCCCTCCACAGTC
GGGAGCAAGTGGGAGAAGAGGAAACAAATTCTTTATCCAAGATGATGATAGTGGGGAGGAACTC
AAGGGTCCAGGAACAGTGCCACCTGTCCCTTCACCCCCTCCCTCATCCCCATCCTCTCCTGCTG
CCTTGCAGCCGTCAGGCAGGGCTACAAGAGGAGAAACCTTGTTTGGAGGCTCTGCTGGCAGCAC
CAGTGAGCTAGAGCCCTTCAGTCTTTCATCATTCCCAGACCTTATGGGAGAACTCATCACTGAT
GAAGCCCCAGGTGTCCCTGCCCCAAGCCCCCAGCTTTCTCCTGTGCTTAACACCATCACAGACT
TTTCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAGGTGCTCATCACAGGCCCTTGGACAGA
GGCCGCAGAGCATTACTCCTGTGTCTTCGATCACATCGCAGTGCCGGCCTCCCTGGTCCAGCCT
GGTGTCTTACGCTGTTACTGTCCTGCCCATGAGGTAGGGCTGGTGTCTTTGCAGGTAGCAGGGC
GGGAAGGCCCACTCTCTGCTTCTGTGCTCTTTGAGTATCGAGCTCGCCGGTTCCTGTCTCTGCC
TAGTACACAGCTTGACTGGTTGTCACTGGATGACAGCCAGTTCCGGATGTCCATCCTAGAGCGG
CTGGAGCAGATGGAGAAGCGGATGGCAGAGATCGCAGCAGCTGGACAGGCACCTGGCCAGGGTC
CAGAGGCTCCTCCAATTCAGGATGAAGGCCAGGGCCCTGGCTTCGAAGCACGGGTGGTGGTCTT
GGTAGAGAGCATGATCCCACGGTCCACTTGGAGGGGTCCTGAACGTCTGATGCATGGAAGCCCC
TTCCGGGGCATGAGCCTTCTGCATCTGGCTGCTGCACAGGGCTACGCTCGGCTCATTGAGACTC
TGAGCCAGTGGCGGAGTGTGGAAACGGGAAGCCTGGACTTAGAGCAAGAGGCTGACCCGCTCAA
TGTGGACCATTTCTCTTGCACCCCTCTGATGTGGGCGTGTGCTCTGGGACACTTAGAAGCAGCT
GTGCTCCTTTTCTGTTGGAACCGACAAGCACTGAGCATTCCTGACTCTCTGGGCCGGCTACCCC
TATCTGTGGCTCATTCTCGGGGTCATGTGCGCCTTGCCCGCTGCCTTGAAGAACTACAGAGACA
GGAGCTTTCAGTTGAGCACCCACTCGCTCTATCTCCACAGTCTTCGAGCCCAGACACTGGCCTG
AGCAGCGTCTCTTCACCCTCGGAGCTGTCAGATGGTACTTTCTCTGTGACATCAGCTTACTCAA
GTGCCCCAGATGGCAGTCCTCCCCCTGCTCCCATGCTGGCCTCTGAAATTTCTATGGAGACCAT
CCCAGGCCAGCTTTCTTTTGGTGCCCCTGAGACACCCTTACTCCTCATGGACTACGAAGCCACT
AACTCCAAAGAATCTGCTCCCTCCCCTTCTGGCCTCCCTCTAGCCCAGGATGACAGGGCTGCTC
CAGAGGATGCTGACAGCCCACCAGCTGTGGATGTGATCCCGGTGGACATGATCTCACTGGCCAA
GCAGATCATCGAAGCCACACCGGAACGGATTAAACGAGAGGACTTCTCAGAGTTACCTGAAGCT
GGAGCCTCACCAAGGGAGCACACAGGCACTGTGGGGCTCAGTGAGACCATGTCCTGGCTAGCCA
GTTACCTGGAGAATGTGGACCATTTCCCCAGCTCAGCCTTTCCTAGTGAACTGCCCTTTGAACG
AGGTCGCCCAGCTATCCCTCCAGCACCTTCCTGGGCAGAGTTCCTCTCTGCATCTACCAGTGGC
AAGATGGAAAGTGACTTTGCCCTCCTGACACTCTCAGATCATGAGCAGCGGGAACTGTATGAGG
CAGCACGAGTCATCCAGACGGCTTTTCGAAAGTATAAGGGTCGGAGGTTGAAGGAACAGCAGGA
GGTAGCCGCAGCGGTGATTCAGCGTTGTTATCGGAAGTACAAGCAGCTGACCTGGATTGCACTT
AAGTTTGCACTCTATAAGAAAATGACTCAGGCAGCCATCCTGATTCAGAGCAAGTTCCGAAGCT
ACTATGAACAGAAGAGGTTTCAGCAGAGCCGCCGAGCAGCTGTGCTTATCCAGCAGCACTACCG
CTCCTACCGCCGCAGGCCGGGGCCTCCTCACCGGCCCTCAGGCCCCCTTCCTTCTCGAAACAAG
GGCACCTTTCTCACGAAGAAGCAGGACCAGGCAGCCCGGAAAATAATGAGGTTCCTGCGGCGCT
GCCGACACAGAATGAGGGAACTGAAGCAGAACCAGGAGCTGGAGGGGCTGCCCCAGCCAGGACT
GGCCACCTGACCTCTCTACCGCCTTTCTCCACACCCTGGGGGCCCCTTCTGGCTGTCTAAACAA
GGAGAGGGCTTTCGGGACTAGGGGAGCCCCCTGTCGGCAGCTCTTCCCCCTTCACCTTTTTGGG
AGCCCTTCGTAGAATCCCCGCCCCTATTCCCAGCCTTACACGTTTCCCCCCTACTGGTCGTGCC
TCCTCTTTTGGTCCCTGGCTCCAGAAGACCCGTGCCCCACATATCTGCATCTTCAGCTGTGACT
ATGGAGCCCTGCCTGCACCTTCTCCATAACCCCGTTCCTGCCTGCACTTGACTCGGACCTTCCT
GACTTGCCTTATTTATTTGTTCGACGAGTCTCTGATGAATGTATCCGCCTCGGTCCCCACCGCT
GCCTTCGCTGCGCGCGCCCTCGTGTTTCAGGGGTGACTCTGCCCCACCCTGACTCCGCATGTTT
GCGTCTGTTTCCTCCTTTCCTGGCCCTGTCTTCCCCATCACCCTGACTCTGGTCACCCACTTAG
GGGCCAAAGAGGAGGGGGTGTACATAGGATCGCGAGGCGGAGTCCCGCTCCCGTGGGGAGGGGT
TTGTACATAACTGTAACATACAGAGTATAGTGAAGAATCTATTTAAGGCGCTGCGCGGCGGGAG
CCCCCCGGGCTGGCTCCACGAGCACTTTCTACTTGTGCATGGGCTTGGTTTATACGAATTGCCA
TTAAACGTCTCTGCACCAGTTA

hide sequence

RefSeq Acc Id:

XM_017597100 ⟹ XP_017452589

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,900,575 (-)	NCBI
mRatBN7.2	10	55,383,450 - 55,401,838 (-)	NCBI
Rnor_6.0	10	57,291,192 - 57,309,638 (-)	NCBI

Sequence:

show sequence

AGGTCCCCAAATTTGCCGAGTCTCGCCCGAGGCCAGAAGAGTTCTGCATTCTCAAGCATTCTCA
TTTGCCTCCAGGGCTCTGGCTCTGGACCTTTGCCCACGCCCCATCCTCCTGCGCCCACAGTCAC
GTCAATCCGCCGCGCTTCCGCCTCCGGATCCCGGTTCCTCACCGCTATTGCCTCTTTAGGGACG
GTCCAGCAGCGCGTCTCACAGACTGGCCCAGAGCCCCAAGTGTGCTGACCCCAGGTTCCCTTCC
CGACCCCCGTTCCCTTAATTGGGAGGCCCCGCCCCGTGCGCACTGACGTCGAACGCCACTGTCA
GCCGGCGCTAGGGGGGGTCGGTTTGGGGTAGAATGGCCGCTGCCGCCGTCACCCGCGGGACCCC
GGGAGCACAGACTCCCCCTCCCCCCGGCCCCTCAGGCCGGGGGTGACCTTGCCCCCTGGAACCT
TCACTATGAATACCAAGGACACCACTGAGGTTGCTGAGAACAGCCACCACCTGAAGATCTTCCT
CCCCAAGAAACTGCTGGAGTGTCTTCCTCGATGCCCACTGCTGCCTCCAGAGCGGCTCCGATGG
AATACAAATGAGGAGATTGCATCCTACCTGATCACCTTTGAGAAACATGATGAGTGGCTGTCTT
GTGCCCCAAAGACAAGGCCTCAAAATGGCTCCATTATCCTCTACAATCGTAAGAAGGTGAAATA
CCGGAAGGATGGTTACCTTTGGAAGAAGCGGAAAGATGGGAAGACTACCCGAGAAGACCACATG
AAACTCAAGGTCCAGGGCATGGAGCCTGTCTCCTGGCAGTGTCTCTATGGCTGCTACGTTCACT
CTTCCATCGTCCCCACATTCCATCGGCGCTGCTATTGGCTGCTCCAGAACCCTGACATCGTCCT
TGTGCACTACCTGAATGTCCCAGCCCTGGAGGATTGTGGAAAGGGCTGTAGCCCCATCTTTTGT
TCCATTAGTAGCGACCGGCGAGAATGGCTGAAGTGGTCACGTGAGGAGCTATTGGGACAGCTGA
AGCCCATGTTTCATGGCATCAAGTGGAGCTGTGGGAATGGGTTGGAGGAATTCTCTGTGGAACA
GTTGGTGCAGCAGATCTTGGACACCCATCCAACCAAACCAGCACCCCGAACCCATGCTTGTCTC
TGCAGTGGGGGCCTTGGTTCTGGGAGCCTTACCCACAAATGCAGTAGCACGAAACACCGCATCA
TCTCTCCTAAAGTGGAGCCTCGAGCTTTAACCTTGGCTTCTATCTCCCACTCCAAGCCCCCTGA
ACCTCCACCACTGATAGCTCCACTTCCTCCCGAGCTCCCCAAGGCACATACCTCCCCATCTTCC
TCCTCTTCTTCCTCCTCCTCAGGATTTGCAGAACCCCTAGAAATCAGACCTAGCCCTCCTACCT
CTCGAGGGGGTTCATCTCGAGGAGGCACTGCCATTCTTCTCCTAACGGGACTAGAGCAGCGTGC
TGGGGGCCTGACACCCACCAGACACTTGGCTTCACAGGCTGAGCCTAGACCTCCTGTGAGCTTG
GCTGTGGTTGTAGGTTCTGAGCCTTCTGCCCCGCCAGCTCCTCCCAGCCCTGCCTTTGACCCTG
ATCGTTTTCTCAACAGTCCCCAAAGGGGCCAGACATATGGAGGGGGCCAAGGGGTGAATCCGGA
CTTCCCTGAGGCAGAGGGCACTCACACTCCCTGCCCTGCCCTAGAACCTGCTGCTGCCTTGGAG
CCCCAGGCCGCTGCACGGGGTCTCCCTCCACAGTCGGGAGCAAGTGGGAGAAGAGGAAACAAAT
TCTTTATCCAAGATGATGATAGTGGGGAGGAACTCAAGGGTCCAGGAACAGTGCCACCTGTCCC
TTCACCCCCTCCCTCATCCCCATCCTCTCCTGCTGCCTTGCAGCCGTCAGGCAGGGCTACAAGA
GGAGAAACCTTGTTTGGAGGCTCTGCTGGCAGCACCAGTGAGCTAGAGCCCTTCAGTCTTTCAT
CATTCCCAGACCTTATGGGAGAACTCATCACTGATGAAGCCCCAGGTGTCCCTGCCCCAAGCCC
CCAGCTTTCTCCTGTGCTTAACACCATCACAGACTTTTCCCCAGAGTGGTCCTACCCAGAGGGT
GGGGTCAAGGTGCTCATCACAGGCCCTTGGACAGAGGCCGCAGAGCATTACTCCTGTGTCTTCG
ATCACATCGCAGTGCCGGCCTCCCTGGTCCAGCCTGGTGTCTTACGCTGTTACTGTCCTGCCCA
TGAGGTAGGGCTGGTGTCTTTGCAGGTAGCAGGGCGGGAAGGCCCACTCTCTGCTTCTGTGCTC
TTTGAGTATCGAGCTCGCCGGTTCCTGTCTCTGCCTAGTACACAGCTTGACTGGTTGTCACTGG
ATGACAGCCAGTTCCGGATGTCCATCCTAGAGCGGCTGGAGCAGATGGAGAAGCGGATGGCAGA
GATCGCAGCAGCTGGACAGGCACCTGGCCAGGGTCCAGAGGCTCCTCCAATTCAGGATGAAGGC
CAGGGCCCTGGCTTCGAAGCACGGGTGGTGGTCTTGGTAGAGAGCATGATCCCACGGTCCACTT
GGAGGGGTCCTGAACGTCTGATGCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCATCTGGC
TGCTGCACAGGGCTACGCTCGGCTCATTGAGACTCTGAGCCAGTGGCGGAGTGTGGAAACGGGA
AGCCTGGACTTAGAGCAAGAGGCTGACCCGCTCAATGTGGACCATTTCTCTTGCACCCCTCTGA
TGTGGGCGTGTGCTCTGGGACACTTAGAAGCAGCTGTGCTCCTTTTCTGTTGGAACCGACAAGC
ACTGAGCATTCCTGACTCTCTGGGCCGGCTACCCCTATCTGTGGCTCATTCTCGGGGTCATGTG
CGCCTTGCCCGCTGCCTTGAAGAACTACAGAGACAGGAGCTTTCAGTTGAGCACCCACTCGCTC
TATCTCCACAGTCTTCGAGCCCAGACACTGGCCTGAGCAGCGTCTCTTCACCCTCGGAGCTGTC
AGATGGTACTTTCTCTGTGACATCAGCTTACTCAAGTGCCCCAGATGGCAGTCCTCCCCCTGCT
CCCATGCTGGCCTCTGAAATTTCTATGGAGACCATCCCAGGCCAGCTTTCTTTTGGTGCCCCTG
AGACACCCTTACTCCTCATGGACTACGAAGCCACTAACTCCAAAGAATCTGCTCCCTCCCCTTC
TGGCCTCCCTCTAGCCCAGGATGACAGGGCTGCTCCAGAGGATGCTGACAGCCCACCAGCTGTG
GATGTGATCCCGGTGGACATGATCTCACTGGCCAAGCAGATCATCGAAGCCACACCGGAACGGA
TTAAACGAGAGGACTTCTCAGAGTTACCTGAAGCTGGAGCCTCACCAAGGGAGCACACAGGCAC
TGTGGGGCTCAGTGAGACCATGTCCTGGCTAGCCAGTTACCTGGAGAATGTGGACCATTTCCCC
AGCTCAGCCTTTCCTAGTGAACTGCCCTTTGAACGAGGTCGCCCAGCTATCCCTCCAGCACCTT
CCTGGGCAGAGTTCCTCTCTGCATCTACCAGTGGCAAGATGGAAAGTGACTTTGCCCTCCTGAC
ACTCTCAGATCATGAGCAGCGGGAACTGTATGAGGCAGCACGAGTCATCCAGACGGCTTTTCGA
AAGTATAAGGGTCGGAGGTTGAAGGAACAGCAGGAGGTAGCCGCAGCGGTGATTCAGCGTTGTT
ATCGGAAGTACAAGCAGCTGACCTGGATTGCACTTAAGTTTGCACTCTATAAGAAAATGACTCA
GGCAGCCATCCTGATTCAGAGCAAGTTCCGAAGCTACTATGAACAGAAGAGGTTTCAGCAGAGC
CGCCGAGCAGCTGTGCTTATCCAGCAGCACTACCGCTCCTACCGCCGCAGGCCGGGGCCTCCTC
ACCGGCCCTCAGGCCCCCTTCCTTCTCGAAACAAGGGCACCTTTCTCACGAAGAAGCAGGACCA
GGCAGCCCGGAAAATAATGAGGTTCCTGCGGCGCTGCCGACACAGAATGAGGGAACTGAAGCAG
AACCAGGAGCTGGAGGGGCTGCCCCAGCCAGGACTGGCCACCTGACCTCTCTACCGCCTTTCTC
CACACCCTGGGGGCCCCTTCTGGCTGTCTAAACAAGGAGAGGGCTTTCGGGACTAGGGGAGCCC
CCTGTCGGCAGCTCTTCCCCCTTCACCTTTTTGGGAGCCCTTCGTAGAATCCCCGCCCCTATTC
CCAGCCTTACACGTTTCCCCCCTACTGGTCGTGCCTCCTCTTTTGGTCCCTGGCTCCAGAAGAC
CCGTGCCCCACATATCTGCATCTTCAGCTGTGACTATGGAGCCCTGCCTGCACCTTCTCCATAA
CCCCGTTCCTGCCTGCACTTGACTCGGACCTTCCTGACTTGCCTTATTTATTTGTTCGACGAGT
CTCTGATGAATGTATCCGCCTCGGTCCCCACCGCTGCCTTCGCTGCGCGCGCCCTCGTGTTTCA
GGGGTGACTCTGCCCCACCCTGACTCCGCATGTTTGCGTCTGTTTCCTCCTTTCCTGGCCCTGT
CTTCCCCATCACCCTGACTCTGGTCACCCACTTAGGGGCCAAAGAGGAGGGGGTGTACATAGGA
TCGCGAGGCGGAGTCCCGCTCCCGTGGGGAGGGGTTTGTACATAACTGTAACATACAGAGTATA
GTGAAGAATCTATTTAAGGCGCTGCGCGGCGGGAGCCCCCCGGGCTGGCTCCACGAGCACTTTC
TACTTGTGCATGGGCTTGGTTTATACGAATTGCCATTAAACGTCTCTGCACCAGTTA

hide sequence

RefSeq Acc Id:

XM_039085483 ⟹ XP_038941411

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,899,330 (-)	NCBI
mRatBN7.2	10	55,383,450 - 55,400,709 (-)	NCBI

RefSeq Acc Id:

XM_039085484 ⟹ XP_038941412

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,900,012 (-)	NCBI
mRatBN7.2	10	55,383,450 - 55,400,709 (-)	NCBI

RefSeq Acc Id:

XM_039085486 ⟹ XP_038941414

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,900,007 (-)	NCBI
mRatBN7.2	10	55,383,450 - 55,400,708 (-)	NCBI

RefSeq Acc Id:

XM_039085487 ⟹ XP_038941415

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,899,330 (-)	NCBI
mRatBN7.2	10	55,383,450 - 55,400,709 (-)	NCBI

RefSeq Acc Id:

XM_063268662 ⟹ XP_063124732

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,898,702 (-)	NCBI

RefSeq Acc Id:

XM_063268663 ⟹ XP_063124733

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	10	55,882,071 - 55,898,702 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001099271	(Get FASTA)	NCBI Sequence Viewer
	XP_017452589	(Get FASTA)	NCBI Sequence Viewer
	XP_038941411	(Get FASTA)	NCBI Sequence Viewer
	XP_038941412	(Get FASTA)	NCBI Sequence Viewer
	XP_038941414	(Get FASTA)	NCBI Sequence Viewer
	XP_038941415	(Get FASTA)	NCBI Sequence Viewer
	XP_063124732	(Get FASTA)	NCBI Sequence Viewer
	XP_063124733	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM05046	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000053461
	ENSRNOP00000053461.4
	ENSRNOP00000080026
	ENSRNOP00000080026.1
	ENSRNOP00000086530
	ENSRNOP00000086530.1
	ENSRNOP00000086676
	ENSRNOP00000086676.1
	ENSRNOP00000090701.1

RefSeq Acc Id:

NP_001099271 ⟸ NM_001105801

- UniProtKB:

A0A8I6GE51 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNTKDTTEVAENSHHLKIFLPKKLLECLPRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCA
PKTRPQNGSIILYNRKKVKYRKDGYLWKKRKDGKTTREDHMKLKVQGMECLYGCYVHSSIVPTF
HRRCYWLLQNPDIVLVHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKPMFHGI
KWSCGNGLEEFSVEQLVQQILDTHPTKPAPRTHACLCSGGLGSGSLTHKCSSTKHRIISPKVEP
RALTLASISHSKPPEPPPLIAPLPPELPKAHTSPSSSSSSSSSGFAEPLEIRPSPPTSRGGSSR
GGTAILLLTGLEQRAGGLTPTRHLASQAEPRPPVSLAVVVGSEPSAPPAPPSPAFDPDRFLNSP
QRGQTYGGGQGVNPDFPEAEGTHTPCPALEPAAALEPQAAARGLPPQSGASGRRGNKFFIQDDD
SGEELKGPGTVPPVPSPPPSSPSSPAALQPSGRATRGETLFGGSAGSTSELEPFSLSSFPDLMG
ELITDEAPGVPAPSPQLSPVLNTITDFSPEWSYPEGGVKVLITGPWTEAAEHYSCVFDHIAVPA
SLVQPGVLRCYCPAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPSTQLDWLSLDDSQFRM
SILERLEQMEKRMAEIAAAGQAPGQGPEAPPIQDEGQGPGFEARVVVLVESMIPRSTWRGPERL
MHGSPFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLDLEQEADPLNVDHFSCTPLMWACALG
HLEAAVLLFCWNRQALSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQELSVEHPLALSPQSSS
PDTGLSSVSSPSELSDGTFSVTSAYSSAPDGSPPPAPMLASEISMETIPGQLSFGAPETPLLLM
DYEATNSKESAPSPSGLPLAQDDRAAPEDADSPPAVDVIPVDMISLAKQIIEATPERIKREDFS
ELPEAGASPREHTGTVGLSETMSWLASYLENVDHFPSSAFPSELPFERGRPAIPPAPSWAEFLS
ASTSGKMESDFALLTLSDHEQRELYEAARVIQTAFRKYKGRRLKEQQEVAAAVIQRCYRKYKQL
TWIALKFALYKKMTQAAILIQSKFRSYYEQKRFQQSRRAAVLIQQHYRSYRRRPGPPHRPSGPL
PSRNKGTFLTKKQDQAARKIMRFLRRCRHRMRELKQNQELEGLPQPGLAT

hide sequence

RefSeq Acc Id:	XP_017452589 ⟸ XM_017597100
- Peptide Label:	isoform X5
- UniProtKB:	D3ZLG1 (UniProtKB/TrEMBL), A0A8I6GE51 (UniProtKB/TrEMBL)
- Sequence:	show sequence MNTKDTTEVAENSHHLKIFLPKKLLECLPRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCA PKTRPQNGSIILYNRKKVKYRKDGYLWKKRKDGKTTREDHMKLKVQGMEPVSWQCLYGCYVHSS IVPTFHRRCYWLLQNPDIVLVHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKP MFHGIKWSCGNGLEEFSVEQLVQQILDTHPTKPAPRTHACLCSGGLGSGSLTHKCSSTKHRIIS PKVEPRALTLASISHSKPPEPPPLIAPLPPELPKAHTSPSSSSSSSSSGFAEPLEIRPSPPTSR GGSSRGGTAILLLTGLEQRAGGLTPTRHLASQAEPRPPVSLAVVVGSEPSAPPAPPSPAFDPDR FLNSPQRGQTYGGGQGVNPDFPEAEGTHTPCPALEPAAALEPQAAARGLPPQSGASGRRGNKFF IQDDDSGEELKGPGTVPPVPSPPPSSPSSPAALQPSGRATRGETLFGGSAGSTSELEPFSLSSF PDLMGELITDEAPGVPAPSPQLSPVLNTITDFSPEWSYPEGGVKVLITGPWTEAAEHYSCVFDH IAVPASLVQPGVLRCYCPAHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPSTQLDWLSLDD SQFRMSILERLEQMEKRMAEIAAAGQAPGQGPEAPPIQDEGQGPGFEARVVVLVESMIPRSTWR GPERLMHGSPFRGMSLLHLAAAQGYARLIETLSQWRSVETGSLDLEQEADPLNVDHFSCTPLMW ACALGHLEAAVLLFCWNRQALSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQELSVEHPLALS PQSSSPDTGLSSVSSPSELSDGTFSVTSAYSSAPDGSPPPAPMLASEISMETIPGQLSFGAPET PLLLMDYEATNSKESAPSPSGLPLAQDDRAAPEDADSPPAVDVIPVDMISLAKQIIEATPERIK REDFSELPEAGASPREHTGTVGLSETMSWLASYLENVDHFPSSAFPSELPFERGRPAIPPAPSW AEFLSASTSGKMESDFALLTLSDHEQRELYEAARVIQTAFRKYKGRRLKEQQEVAAAVIQRCYR KYKQLTWIALKFALYKKMTQAAILIQSKFRSYYEQKRFQQSRRAAVLIQQHYRSYRRRPGPPHR PSGPLPSRNKGTFLTKKQDQAARKIMRFLRRCRHRMRELKQNQELEGLPQPGLAT hide sequence

Ensembl Acc Id:

ENSRNOP00000053461 ⟸ ENSRNOT00000056622

RefSeq Acc Id:	XP_038941415 ⟸ XM_039085487
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I6GE51 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038941412 ⟸ XM_039085484
- Peptide Label:	isoform X2
- UniProtKB:	A6HG91 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038941411 ⟸ XM_039085483
- Peptide Label:	isoform X1
- UniProtKB:	A6HG91 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038941414 ⟸ XM_039085486
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5ZPC9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000080026 ⟸ ENSRNOT00000095887

Ensembl Acc Id:

ENSRNOP00000090701 ⟸ ENSRNOT00000117371

Ensembl Acc Id:

ENSRNOP00000086676 ⟸ ENSRNOT00000116547

Ensembl Acc Id:

ENSRNOP00000086530 ⟸ ENSRNOT00000109888

RefSeq Acc Id:	XP_063124733 ⟸ XM_063268663
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5ZPC9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063124732 ⟸ XM_063268662
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZPC9 (UniProtKB/TrEMBL)

Protein Domains

CG-1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZLG1-F1-model_v2	AlphaFold	D3ZLG1	1-1202	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13697375

Promoter ID:

EPDNEW_R7898

Type:

initiation region

Name:

Camta2_1

Description:

calmodulin binding transcription activator 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	10	57,309,325 - 57,309,385	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1311296	AgrOrtholog
BioCyc Gene	G2FUF-24436	BioCyc
Ensembl Genes	ENSRNOG00000004283	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000056622	ENTREZGENE
	ENSRNOT00000056622.4	UniProtKB/TrEMBL
	ENSRNOT00000095887	ENTREZGENE
	ENSRNOT00000095887.1	UniProtKB/TrEMBL
	ENSRNOT00000109888	ENTREZGENE
	ENSRNOT00000109888.1	UniProtKB/TrEMBL
	ENSRNOT00000116547	ENTREZGENE
	ENSRNOT00000116547.1	UniProtKB/TrEMBL
	ENSRNOT00000117371.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.190	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	CG-1	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	IPT_TIG_rcpt	UniProtKB/TrEMBL
	IQ_motif_EF-hand-BS	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
NCBI Gene	287462	ENTREZGENE
PANTHER	CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA	UniProtKB/TrEMBL
	PTHR23335:SF9	UniProtKB/TrEMBL
Pfam	CG-1	UniProtKB/TrEMBL
	TIG	UniProtKB/TrEMBL
PhenoGen	Camta2	PhenoGen
PROSITE	CG_1	UniProtKB/TrEMBL
	PS50096	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004283	RatGTEx
SMART	CG-1	UniProtKB/TrEMBL
	SM00015	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
	Ig_E-set	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8I5ZPC9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A2R7_RAT	UniProtKB/TrEMBL
	A0A8I6AEB2_RAT	UniProtKB/TrEMBL
	A0A8I6GE51	ENTREZGENE, UniProtKB/TrEMBL
	A6HG91	ENTREZGENE, UniProtKB/TrEMBL
	D3ZLG1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Camta2	calmodulin binding transcription activator 2	Camta2_predicted	calmodulin binding transcription activator 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Camta2_predicted	calmodulin binding transcription activator 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar