Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Tyw5 (tRNA-yW synthesizing protein 5) Rattus norvegicus
Analyze
Symbol: Tyw5
Name: tRNA-yW synthesizing protein 5
Description: Predicted to have several functions, including iron ion binding activity; protein homodimerization activity; and tRNA binding activity. Predicted to be involved in wybutosine biosynthetic process. Orthologous to human TYW5 (tRNA-yW synthesizing protein 5); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: C2orf60; hypothetical protein LOC301419; LOC301419; RGD1311269; similar to hypothetical protein FLJ37953; tRNA wybutosine-synthesizing protein 5; uncharacterized protein LOC301419
Orthologs:
Homo sapiens (human) : TYW5 (tRNA-yW synthesizing protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Tyw5 (tRNA-yW synthesizing protein 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tyw5 (tRNA-yW synthesizing protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TYW5 (tRNA-yW synthesizing protein 5)
Canis lupus familiaris (dog) : TYW5 (tRNA-yW synthesizing protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tyw5 (tRNA-yW synthesizing protein 5)
Sus scrofa (pig) : TYW5 (tRNA-yW synthesizing protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0964,077,841 - 64,096,265 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl964,077,845 - 64,096,265 (-)Ensembl
Rnor_5.0963,883,688 - 63,901,784 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4956,283,826 - 56,302,571 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1956,430,812 - 56,449,222 (-)NCBI
Celera956,407,437 - 56,425,095 (-)NCBICelera
Cytogenetic Map9q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tyw5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311269
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.