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Gene: Slc47a1 (solute carrier family 47 member 1) Rattus norvegicus
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Symbol: Slc47a1
Name: solute carrier family 47 member 1
Description: Exhibits amide transmembrane transporter activity and xenobiotic transmembrane transporter activity. Involved in cation transmembrane transport and organic cation transport. Localizes to vesicle. Orthologous to human SLC47A1 (solute carrier family 47 member 1); PARTICIPATES IN cisplatin response pathway; metformin pharmacokinetics pathway; INTERACTS WITH bisphenol A; C60 fullerene; hexane.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: H+/organic cation antiporter variant 1; H+/organic cation antiporter variant 2; LOC360539; MATE-1; MATE1; multidrug and toxin extrusion protein 1; RGD1311123; rMATE-1; similar to 1300013J15Rik protein; solute carrier family 47 (multidrug and toxin extrusion), member 1; solute carrier family 47, member 1
Orthologs:
Homo sapiens (human) : SLC47A1 (solute carrier family 47 member 1)  HGNC  Alliance
Mus musculus (house mouse) : Slc47a1 (solute carrier family 47, member 1)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : SLC47A1 (solute carrier family 47 member 1)
Canis lupus familiaris (dog) : SLC47A1 (solute carrier family 47 member 1)
Sus scrofa (pig) : SLC47A1 (solute carrier family 47 member 1)
Chlorocebus sabaeus (African green monkey) : SLC47A1 (solute carrier family 47 member 1)
Heterocephalus glaber (naked mole-rat) : Slc47a1 (solute carrier family 47 member 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01047,631,425 - 47,685,379 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1047,632,192 - 47,666,921 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01047,405,592 - 47,440,116 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,514,258 - 47,548,353 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11047,526,815 - 47,561,996 (-)NCBI
Celera1045,287,837 - 45,321,882 (-)NCBICelera
Cytogenetic Map10q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Slc47a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311123
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.