Psd2 (pleckstrin and Sec7 domain containing 2) - Rat Genome Database

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Gene: Psd2 (pleckstrin and Sec7 domain containing 2) Rattus norvegicus
Analyze
Symbol: Psd2
Name: pleckstrin and Sec7 domain containing 2
RGD ID: 1311075
Description: Predicted to enable guanyl-nucleotide exchange factor activity and phospholipid binding activity. Predicted to be involved in regulation of ARF protein signal transduction. Predicted to be located in several cellular components, including cleavage furrow; neuronal cell body; and ruffle membrane. Predicted to be active in glutamatergic synapse and postsynapse. Orthologous to human PSD2 (pleckstrin and Sec7 domain containing 2); PARTICIPATES IN endocytosis pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC307500; PH and SEC7 domain-containing protein 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81827,838,943 - 27,890,712 (+)NCBIGRCr8
mRatBN7.21827,564,912 - 27,616,674 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1827,565,587 - 27,616,672 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1827,692,954 - 27,744,032 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01828,454,833 - 28,505,919 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01827,789,686 - 27,840,777 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01828,781,267 - 28,832,429 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,781,349 - 28,832,428 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01828,490,917 - 28,541,902 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41828,596,136 - 28,647,134 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11828,595,933 - 28,671,884 (+)NCBI
Celera1827,296,946 - 27,347,999 (+)NCBICelera
Cytogenetic Map18p11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:15836626   PMID:23603394  


Genomics

Comparative Map Data
Psd2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81827,838,943 - 27,890,712 (+)NCBIGRCr8
mRatBN7.21827,564,912 - 27,616,674 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1827,565,587 - 27,616,672 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1827,692,954 - 27,744,032 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01828,454,833 - 28,505,919 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01827,789,686 - 27,840,777 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01828,781,267 - 28,832,429 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1828,781,349 - 28,832,428 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01828,490,917 - 28,541,902 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41828,596,136 - 28,647,134 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11828,595,933 - 28,671,884 (+)NCBI
Celera1827,296,946 - 27,347,999 (+)NCBICelera
Cytogenetic Map18p11NCBI
PSD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385139,742,475 - 139,844,466 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5139,795,808 - 139,844,466 (+)EnsemblGRCh38hg38GRCh38
GRCh375139,175,393 - 139,224,051 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365139,155,590 - 139,204,232 (+)NCBINCBI36Build 36hg18NCBI36
Build 345139,155,589 - 139,204,232NCBI
Celera5135,250,835 - 135,299,476 (+)NCBICelera
Cytogenetic Map5q31.2NCBI
HuRef5134,332,037 - 134,367,333 (+)NCBIHuRef
CHM1_15138,608,513 - 138,657,158 (+)NCBICHM1_1
T2T-CHM13v2.05140,266,708 - 140,369,568 (+)NCBIT2T-CHM13v2.0
Psd2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391836,075,480 - 36,147,768 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1836,097,883 - 36,147,768 (+)EnsemblGRCm39 Ensembl
GRCm381835,963,872 - 36,014,715 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1835,964,830 - 36,014,715 (+)EnsemblGRCm38mm10GRCm38
MGSCv371836,124,489 - 36,174,369 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361836,091,079 - 36,140,648 (+)NCBIMGSCv36mm8
Celera1836,421,573 - 36,471,515 (+)NCBICelera
Cytogenetic Map18B2NCBI
cM Map1819.34NCBI
Psd2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955418795,825 - 849,088 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955418793,960 - 848,550 (-)NCBIChiLan1.0ChiLan1.0
PSD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24135,058,026 - 135,106,728 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15133,197,584 - 133,246,281 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05135,162,701 - 135,211,389 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15141,294,395 - 141,329,952 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5141,294,395 - 141,329,952 (+)Ensemblpanpan1.1panPan2
PSD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1234,940,295 - 35,080,623 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl234,935,858 - 35,082,085 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha232,066,494 - 32,185,433 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0235,418,645 - 35,537,537 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl235,418,835 - 35,537,499 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1232,471,017 - 32,589,886 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0233,337,591 - 33,456,565 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0234,088,907 - 34,208,097 (+)NCBIUU_Cfam_GSD_1.0
Psd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213152,730,237 - 152,776,178 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365318,835,464 - 8,881,683 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365318,835,486 - 8,879,862 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PSD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2141,595,464 - 141,658,713 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12141,591,724 - 141,658,711 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22147,508,730 - 147,546,585 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PSD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12342,447,804 - 42,496,066 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2342,461,486 - 42,494,067 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603435,389,233 - 35,444,395 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Psd2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474332,573,044 - 32,616,864 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474332,572,976 - 32,616,922 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Psd2
195 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:582
Count of miRNA genes:268
Interacting mature miRNAs:334
Transcripts:ENSRNOT00000026112
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
2299160Iddm35Insulin dependent diabetes mellitus QTL 352.79blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)18420794160377792Rat
2312568Glom21Glomerulus QTL 2120.005kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)18518585840503530Rat
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
61382Bp46Blood pressure QTL 4618.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194179131393320Rat
631264Scl22Serum cholesterol level QTL 226.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)181194179131393320Rat
1331766Bp236Blood pressure QTL 2363.022arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181194429931359530Rat
61375Bp41Blood pressure QTL 412.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)181194429941122201Rat
1331753Bp231Blood pressure QTL 2313.643arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194429952293055Rat
1358358Sradr6Stress Responsive Adrenal Weight QTL 62.49adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)181194429959330563Rat
6903359Bp355Blood pressure QTL 3553.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)181194454459796478Rat
2313082Bss85Bone structure and strength QTL 850.80.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)181495133759951337Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1331735Rf44Renal function QTL 442.981urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)181823456431359530Rat
1331775Bp235Blood pressure QTL 2353.201arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)181823456431359530Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1641923Colcr8Colorectal carcinoma resistance QTL 83.10.0014intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)182206624252293055Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
12904673Cm127Cardiac mass QTL 1270.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)182654808246969551Rat
12904675Am19Aortic mass QTL 190.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)182654808246969551Rat
12904677Kidm72Kidney mass QTL 720.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)182654808246969551Rat
12904668Bw188Body weight QTL 1880.03body mass (VT:0001259)body weight (CMO:0000012)182654808246969551Rat
12904669Cm125Cardiac mass QTL 1250.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)182654808246969551Rat
12904670Cm126Cardiac mass QTL 1260.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)182654808246969551Rat
2301413Bp318Blood pressure QTL 3180.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182654808246969551Rat

Markers in Region
AU048745  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5q32UniSTS
Cytogenetic Map13q24UniSTS
Cytogenetic Map6q32UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map16p14UniSTS
Cytogenetic Map13q26UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map7q11UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map2q11UniSTS
Cytogenetic Map1q54UniSTS
Cytogenetic Map1q36UniSTS
Cytogenetic Map18p11UniSTS
Cytogenetic Map13q13UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map8q31UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map13p13UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map10q31UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map5q36UniSTS
Cytogenetic Map3p13UniSTS
RH133273  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21827,616,731 - 27,616,924 (+)MAPPERmRatBN7.2
Rnor_6.01828,832,488 - 28,832,680NCBIRnor6.0
Rnor_5.01828,541,961 - 28,542,153UniSTSRnor5.0
RGSC_v3.41828,647,194 - 28,647,386UniSTSRGSC3.4
Celera1827,348,059 - 27,348,251UniSTS
RH 3.4 Map18388.1UniSTS
Cytogenetic Map18p11UniSTS
IDP8024  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21827,607,030 - 27,608,415 (+)MAPPERmRatBN7.2
Rnor_6.01828,822,787 - 28,824,171NCBIRnor6.0
Rnor_5.01828,532,260 - 28,533,644UniSTSRnor5.0
Celera1827,338,358 - 27,339,742UniSTS
Cytogenetic Map18p11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 68
Low 1 3 6 6 22 40 3
Below cutoff 2 19 26 13 13 13 8 10 13 1 8 8

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000026112   ⟹   ENSRNOP00000026112
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1827,565,587 - 27,616,672 (+)Ensembl
Rnor_6.0 Ensembl1828,781,349 - 28,832,428 (+)Ensembl
RefSeq Acc Id: NM_001107395   ⟹   NP_001100865
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,839,627 - 27,890,708 (+)NCBI
mRatBN7.21827,565,587 - 27,616,672 (+)NCBI
Rnor_6.01828,781,349 - 28,832,428 (+)NCBI
Rnor_5.01828,490,917 - 28,541,902 (+)NCBI
RGSC_v3.41828,596,136 - 28,647,134 (+)RGD
Celera1827,296,946 - 27,347,999 (+)RGD
Sequence:
RefSeq Acc Id: XM_039096865   ⟹   XP_038952793
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,846,969 - 27,890,712 (+)NCBI
mRatBN7.21827,564,923 - 27,616,674 (+)NCBI
RefSeq Acc Id: XM_039096866   ⟹   XP_038952794
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,846,969 - 27,890,712 (+)NCBI
mRatBN7.21827,564,923 - 27,616,674 (+)NCBI
RefSeq Acc Id: XM_063277371   ⟹   XP_063133441
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,838,953 - 27,890,712 (+)NCBI
RefSeq Acc Id: XR_005496039
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81827,838,943 - 27,881,871 (+)NCBI
mRatBN7.21827,564,912 - 27,607,838 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001100865 (Get FASTA)   NCBI Sequence Viewer  
  XP_038952793 (Get FASTA)   NCBI Sequence Viewer  
  XP_038952794 (Get FASTA)   NCBI Sequence Viewer  
  XP_063133441 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL76283 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000026112
  ENSRNOP00000026112.6
Reference Protein Sequences
RefSeq Acc Id: NP_001100865   ⟸   NM_001107395
- UniProtKB: A6J301 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000026112   ⟸   ENSRNOT00000026112
RefSeq Acc Id: XP_038952793   ⟸   XM_039096865
- Peptide Label: isoform X1
- UniProtKB: D4ACB6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038952794   ⟸   XM_039096866
- Peptide Label: isoform X1
- UniProtKB: D4ACB6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063133441   ⟸   XM_063277371
- Peptide Label: isoform X2
- UniProtKB: A6J301 (UniProtKB/TrEMBL)
Protein Domains
PH   SEC7

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ACB6-F1-model_v2 AlphaFold D4ACB6 1-771 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311075 AgrOrtholog
BioCyc Gene G2FUF-7883 BioCyc
Ensembl Genes ENSRNOG00000019177 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000026112 ENTREZGENE
  ENSRNOT00000026112.6 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1000.11 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro PH_9 UniProtKB/TrEMBL
  PH_type UniProtKB/TrEMBL
  Pleckstrin_homology UniProtKB/TrEMBL
  Sec7 UniProtKB/TrEMBL
  SEC7_alpha_orthog UniProtKB/TrEMBL
  Sec7_sf UniProtKB/TrEMBL
  Spectrin_PH UniProtKB/TrEMBL
KEGG Report rno:307500 UniProtKB/TrEMBL
NCBI Gene 307500 ENTREZGENE
PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR UniProtKB/TrEMBL
  PH AND SEC7 DOMAIN-CONTAINING PROTEIN 2 UniProtKB/TrEMBL
Pfam PH_9 UniProtKB/TrEMBL
  Sec7 UniProtKB/TrEMBL
PhenoGen Psd2 PhenoGen
PRINTS SPECTRINPH UniProtKB/TrEMBL
PROSITE PH_DOMAIN UniProtKB/TrEMBL
  SEC7 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019177 RatGTEx
SMART Sec7 UniProtKB/TrEMBL
  SM00233 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  Sec7 UniProtKB/TrEMBL
UniProt A6J301 ENTREZGENE, UniProtKB/TrEMBL
  D4ACB6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Psd2  pleckstrin and Sec7 domain containing 2   Psd2_predicted  pleckstrin and Sec7 domain containing 2 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Psd2_predicted  pleckstrin and Sec7 domain containing 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED