Eef1e1 (eukaryotic translation elongation factor 1 epsilon 1) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Eef1e1 (eukaryotic translation elongation factor 1 epsilon 1) Rattus norvegicus
Analyze
Symbol: Eef1e1
Name: eukaryotic translation elongation factor 1 epsilon 1
RGD ID: 1311056
Description: Predicted to be involved in negative regulation of cell population proliferation; positive regulation of apoptotic process; and positive regulation of cellular senescence. Predicted to act upstream of or within cellular response to leukemia inhibitory factor; positive regulation of DNA damage response, signal transduction by p53 class mediator; and positive regulation of apoptotic signaling pathway. Predicted to be located in cytosol; nucleolus; and nucleoplasm. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human EEF1E1 (eukaryotic translation elongation factor 1 epsilon 1); INTERACTS WITH (+)-schisandrin B; 2,4-dinitrotoluene; 3-chloropropane-1,2-diol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: eukaryotic translation elongation factor 1 epsilon-1; LOC291057
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21726,148,652 - 26,159,358 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1726,148,633 - 26,215,720 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1726,015,462 - 26,026,146 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01727,619,040 - 27,629,724 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01725,963,458 - 25,974,170 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01726,785,017 - 26,795,723 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1726,785,029 - 26,797,161 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01728,701,057 - 28,711,763 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41732,217,424 - 32,228,130 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11732,220,267 - 32,231,049 (+)NCBI
Celera1725,790,361 - 25,801,067 (+)NCBICelera
Cytogenetic Map17p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,2-dimethylhydrazine  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dinitrotoluene  (EXP)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-chloropropane-1,2-diol  (EXP)
4-phenylbutyric acid  (ISO)
6-propyl-2-thiouracil  (EXP)
all-trans-retinoic acid  (ISO)
antirheumatic drug  (ISO)
arecoline  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
carbon nanotube  (ISO)
chromium(6+)  (ISO)
clofibric acid  (EXP)
cobalt dichloride  (ISO)
coumarin  (EXP)
cyclosporin A  (ISO)
cylindrospermopsin  (ISO)
decabromodiphenyl ether  (ISO)
diarsenic trioxide  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
endosulfan  (EXP)
enzyme inhibitor  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
flutamide  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
isoflurane  (ISO)
ivermectin  (ISO)
methyl methanesulfonate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nimesulide  (EXP)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (ISO)
paraquat  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
sevoflurane  (ISO)
sodium dichromate  (EXP)
sodium fluoride  (ISO)
tamibarotene  (ISO)
temozolomide  (ISO)
tetrachloromethane  (EXP,ISO)
thalidomide  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trimellitic anhydride  (ISO)
Triptolide  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
aminoacyl-tRNA synthetase multienzyme complex  (IBA,ISO)
cytoplasm  (IBA,ISO)
cytosol  (IEA,ISO)
nucleolus  (IEA,ISO)
nucleoplasm  (IEA,ISO)
nucleus  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Loss of expression of the tumour suppressor gene AIMP3 predicts survival following radiotherapy in muscle-invasive bladder cancer. Gurung PM, etal., Int J Cancer. 2015 Feb 1;136(3):709-20. doi: 10.1002/ijc.29022. Epub 2014 Jul 22.
3. Expression of AIMP1, 2 and 3, the scaffolds for the multi-tRNA synthetase complex, is downregulated in gastric and colorectal cancer. Kim SS, etal., Tumori. 2011 May-Jun;97(3):380-5. doi: 10.1700/912.10038.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Downregulation of lamin A by tumor suppressor AIMP3/p18 leads to a progeroid phenotype in mice. Oh YS, etal., Aging Cell. 2010 Oct;9(5):810-22. doi: 10.1111/j.1474-9726.2010.00614.x.
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12060739   PMID:12477932   PMID:15680327   PMID:19131329   PMID:19289464   PMID:20439489   PMID:23376485   PMID:25465621  


Genomics

Comparative Map Data
Eef1e1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21726,148,652 - 26,159,358 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1726,148,633 - 26,215,720 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1726,015,462 - 26,026,146 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01727,619,040 - 27,629,724 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01725,963,458 - 25,974,170 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01726,785,017 - 26,795,723 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1726,785,029 - 26,797,161 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01728,701,057 - 28,711,763 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41732,217,424 - 32,228,130 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11732,220,267 - 32,231,049 (+)NCBI
Celera1725,790,361 - 25,801,067 (+)NCBICelera
Cytogenetic Map17p12NCBI
EEF1E1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3868,073,360 - 8,102,548 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl68,073,360 - 8,102,559 (-)EnsemblGRCh38hg38GRCh38
GRCh3768,073,593 - 8,102,781 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3668,024,638 - 8,047,780 (-)NCBINCBI36Build 36hg18NCBI36
Build 3468,024,637 - 8,047,780NCBI
Celera69,302,889 - 9,332,123 (-)NCBICelera
Cytogenetic Map6p24.3NCBI
HuRef67,951,056 - 7,980,298 (-)NCBIHuRef
CHM1_168,075,775 - 8,104,990 (-)NCBICHM1_1
T2T-CHM13v2.067,942,094 - 7,971,293 (-)NCBIT2T-CHM13v2.0
Eef1e1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391338,829,667 - 38,843,004 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1338,828,183 - 38,843,034 (-)EnsemblGRCm39 Ensembl
GRCm381338,645,691 - 38,659,028 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1338,644,207 - 38,659,058 (-)EnsemblGRCm38mm10GRCm38
MGSCv371338,737,560 - 38,750,897 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361338,653,160 - 38,666,476 (-)NCBIMGSCv36mm8
Celera1339,761,381 - 39,774,714 (-)NCBICelera
Cytogenetic Map13A3.3NCBI
cM Map1318.38NCBI
Eef1e1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554655,878,058 - 5,895,223 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554655,878,055 - 5,895,232 (+)NCBIChiLan1.0ChiLan1.0
EEF1E1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1618,711,008 - 18,742,518 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v067,911,807 - 7,940,918 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.168,192,997 - 8,222,056 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl68,192,997 - 8,222,056 (-)Ensemblpanpan1.1panPan2
EEF1E1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1358,012,304 - 8,035,176 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha358,019,088 - 8,041,959 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0358,095,255 - 8,118,141 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl358,094,313 - 8,118,174 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1357,943,542 - 7,966,112 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0357,978,329 - 8,000,963 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0359,311,012 - 9,333,903 (-)NCBIUU_Cfam_GSD_1.0
Eef1e1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494616,253,122 - 16,269,548 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365344,522,180 - 4,532,548 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365344,522,115 - 4,532,514 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EEF1E1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl75,370,967 - 5,390,633 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.175,368,341 - 5,390,665 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.275,403,684 - 5,421,444 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EEF1E1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11764,058,992 - 64,082,187 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1764,059,011 - 64,082,586 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660448,071,279 - 8,094,622 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eef1e1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475617,561,510 - 17,583,105 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475617,561,484 - 17,580,225 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Eef1e1
91 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:686
Count of miRNA genes:306
Interacting mature miRNAs:398
Transcripts:ENSRNOT00000022065
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat
7394837Memor18Memory QTL 18exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)171864018263640182Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172308056759555013Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318457246843Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172459934069599340Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 28 38 22 19 22 2 2 74 35 34 11 2
Low 15 19 19 19 6 9 7 6
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000022065   ⟹   ENSRNOP00000022065
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1726,785,029 - 26,797,161 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000111273   ⟹   ENSRNOP00000092572
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1726,148,660 - 26,215,720 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000118967   ⟹   ENSRNOP00000087601
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1726,148,633 - 26,165,093 (+)Ensembl
RefSeq Acc Id: NM_001106106   ⟹   NP_001099576
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.21726,148,652 - 26,159,358 (+)NCBI
Rnor_6.01726,785,017 - 26,795,723 (+)NCBI
Rnor_5.01728,701,057 - 28,711,763 (+)NCBI
RGSC_v3.41732,217,424 - 32,228,130 (+)RGD
Celera1725,790,361 - 25,801,067 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001099576 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI66841 (Get FASTA)   NCBI Sequence Viewer  
  EDL98251 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001099576   ⟸   NM_001106106
- UniProtKB: B2RYN3 (UniProtKB/TrEMBL),   A0A8I6AE61 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000022065   ⟸   ENSRNOT00000022065
RefSeq Acc Id: ENSRNOP00000087601   ⟸   ENSRNOT00000118967
RefSeq Acc Id: ENSRNOP00000092572   ⟸   ENSRNOT00000111273

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RYN3-F1-model_v2 AlphaFold B2RYN3 1-174 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1311056 AgrOrtholog
BioCyc Gene G2FUF-9695 BioCyc
Ensembl Genes ENSRNOG00000016390 Ensembl
  ENSRNOG00000066344 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000087601.1 UniProtKB/TrEMBL
  ENSRNOP00000092572 ENTREZGENE
  ENSRNOP00000092572.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000111273 ENTREZGENE
  ENSRNOT00000111273.1 UniProtKB/TrEMBL
  ENSRNOT00000118967.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1050.10 UniProtKB/TrEMBL
  3.40.30.90 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:9027959 IMAGE-MGC_LOAD
InterPro EEF1E1 UniProtKB/TrEMBL
  Glutathione-S-Trfase_C-like UniProtKB/TrEMBL
  Glutathione-S-Trfase_C_sf UniProtKB/TrEMBL
  GST_C UniProtKB/TrEMBL
KEGG Report rno:291057 UniProtKB/TrEMBL
MGC_CLONE MGC:188732 IMAGE-MGC_LOAD
NCBI Gene 291057 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1 UniProtKB/TrEMBL
  PTHR44490 UniProtKB/TrEMBL
Pfam GST_C UniProtKB/TrEMBL
PhenoGen Eef1e1 PhenoGen
PROSITE GST_CTER UniProtKB/TrEMBL
Superfamily-SCOP GST_C_like UniProtKB/TrEMBL
UniProt A0A8I6A4G8_RAT UniProtKB/TrEMBL
  A0A8I6AE61 ENTREZGENE, UniProtKB/TrEMBL
  B2RYN3 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Eef1e1  eukaryotic translation elongation factor 1 epsilon 1   Eef1e1_predicted  eukaryotic translation elongation factor 1 epsilon 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Eef1e1_predicted  eukaryotic translation elongation factor 1 epsilon 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED