Gene: Utp6 (UTP6 small subunit processome component) Rattus norvegicus
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Symbol: Utp6
Name: UTP6 small subunit processome component
Description: ENCODES a protein that exhibits snoRNA binding (inferred); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog); INTERACTS WITH bisphenol A; endosulfan; ketamine
AGR Description: Predicted to have snoRNA binding activity; predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); predicted to localize to the Pwp2p-containing subcomplex of 90S preribosome and small-subunit processome; orthologous to human UTP6 (UTP6 small subunit processome component).
Merged Description: Predicted to have snoRNA binding activity; predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); predicted to localize to the Pwp2p-containing subcomplex of 90S preribosome and small-subunit processome; orthologous to human UTP6 (UTP6 small subunit processome component); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH bisphenol A; endosulfan; ketamine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC360574; LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 6 homolog; RGD1311017; similar to multiple hat domains; U3 small nucleolar RNA-associated protein 6 homolog; UTP6, small subunit (SSU) processome component, homolog; UTP6, small subunit (SSU) processome component, homolog (yeast)
Orthologs:
Homo sapiens (human) : UTP6 (UTP6 small subunit processome component)  HGNC  Alliance
Mus musculus (house mouse) : Utp6 (UTP6 small subunit processome component)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Utp6 (UTP6 small subunit processome component)
Pan paniscus (bonobo/pygmy chimpanzee) : UTP6 (UTP6 small subunit processome component)
Canis lupus familiaris (dog) : UTP6 (UTP6, small subunit processome component)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Utp6 (UTP6 small subunit processome component)
Sus scrofa (pig) : UTP6 (UTP6 small subunit processome component)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01067,255,177 - 67,285,754 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01066,914,441 - 66,945,093 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41066,140,947 - 66,161,728 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11066,154,087 - 66,175,351 (-)NCBI
Celera1063,863,760 - 63,894,349 (-)NCBICelera
Cytogenetic Map10q25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Utp6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311017
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.