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Gene: Fcf1 (FCF1 rRNA-processing protein) Rattus norvegicus
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Symbol: Fcf1
Name: FCF1 rRNA-processing protein
Description: Predicted to be involved in endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to the nucleolus and small-subunit processome. Orthologous to human FCF1 (FCF1 rRNA-processing protein); PARTICIPATES IN ribosome biogenesis pathway; INTERACTS WITH bisphenol A; finasteride; flutamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: FCF1 small subunit; FCF1 small subunit (SSU) processome component homolog (S. cerevisiae); hypothetical protein LOC299198; LOC299198; RGD1310899; rRNA-processing protein FCF1 homolog; similar to CGI-35 protein
Orthologs:
Homo sapiens (human) : FCF1 (FCF1 rRNA-processing protein)  HGNC  Alliance
Mus musculus (house mouse) : Fcf1 (FCF1 rRNA processing protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Fcf1 (FCF1 rRNA-processing protein)
Pan paniscus (bonobo/pygmy chimpanzee) : FCF1 (FCF1 rRNA-processing protein)
Canis lupus familiaris (dog) : FCF1 (FCF1 rRNA-processing protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Fcf1 (FCF1 rRNA-processing protein)
Sus scrofa (pig) : FCF1 (FCF1 rRNA-processing protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06108,796,182 - 108,808,051 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,796,182 - 108,808,048 (+)Ensembl
Rnor_5.06116,748,856 - 116,760,725 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,016,578 - 109,028,439 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16109,020,040 - 109,031,892 (+)NCBI
Celera6102,440,754 - 102,452,615 (+)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Fcf1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310899
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.