Gene: Ushbp1 (USH1 protein network component harmonin binding protein 1) Rattus norvegicus
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Symbol: Ushbp1
Name: USH1 protein network component harmonin binding protein 1
Description: ENCODES a protein that exhibits PDZ domain binding (ortholog); INTERACTS WITH bisphenol A; 5-azacytidine (ortholog); 8-bromo-3',5'-cyclic AMP (ortholog)
AGR Description: Predicted to have PDZ domain binding activity; orthologous to human USHBP1 (USH1 protein network component harmonin binding protein 1).
Merged Description: Predicted to have PDZ domain binding activity; orthologous to human USHBP1 (USH1 protein network component harmonin binding protein 1); INTERACTS WITH bisphenol A; 5-azacytidine (ortholog); 8-bromo-3',5'-cyclic AMP (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC290629; MGC124707; USH1C-binding protein 1; Usher syndrome 1C binding protein 1; usher syndrome type-1C protein-binding protein 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01619,781,276 - 19,791,832 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01619,641,397 - 19,651,953 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41618,546,489 - 18,557,045 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11618,546,486 - 18,555,536 (-)NCBI
Celera1618,262,900 - 18,273,456 (-)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ushbp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310859
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.