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Gene: Smg7 (SMG7 nonsense mediated mRNA decay factor) Rattus norvegicus
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Symbol: Smg7
Name: SMG7 nonsense mediated mRNA decay factor
Description: Predicted to have protein phosphatase 2A binding activity; telomerase RNA binding activity; and telomeric DNA binding activity. Predicted to be involved in regulation of telomere maintenance via telomerase and telomere maintenance via telomerase. Predicted to localize to the cytosol; intermediate filament cytoskeleton; and telomerase holoenzyme complex. Orthologous to human SMG7 (SMG7 nonsense mediated mRNA decay factor); PARTICIPATES IN mRNA decay pathway; INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; fipronil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC360855; RGD1310761; similar to chromosome 1 open reading frame 16; Smg-7 homolog, nonsense mediated mRNA decay factor; Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)
Orthologs:
Homo sapiens (human) : SMG7 (SMG7 nonsense mediated mRNA decay factor)  HGNC  Alliance
Mus musculus (house mouse) : Smg7 (Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Smg7 (SMG7 nonsense mediated mRNA decay factor)
Pan paniscus (bonobo/pygmy chimpanzee) : SMG7 (SMG7 nonsense mediated mRNA decay factor)
Canis lupus familiaris (dog) : SMG7 (SMG7 nonsense mediated mRNA decay factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Smg7 (SMG7 nonsense mediated mRNA decay factor)
Sus scrofa (pig) : SMG7 (SMG7 nonsense mediated mRNA decay factor)
Chlorocebus sabaeus (African green monkey) : SMG7 (SMG7 nonsense mediated mRNA decay factor)
Heterocephalus glaber (naked mole-rat) : Smg7 (SMG7 nonsense mediated mRNA decay factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01370,258,919 - 70,321,886 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1370,258,915 - 70,321,752 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01375,229,500 - 75,292,318 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41367,835,448 - 67,900,289 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11367,849,527 - 67,951,670 (-)NCBI
Celera1364,891,810 - 64,932,829 (-)NCBICelera
Cytogenetic Map13q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Smg7
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310761
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-03-04
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.