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Gene: Zfp541 (zinc finger protein 541) Rattus norvegicus
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Symbol: Zfp541
Name: zinc finger protein 541
Description: Predicted to have DNA-binding transcription factor activity; transcription factor binding activity; and transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to histone deacetylase complex. Orthologous to human ZNF541 (zinc finger protein 541); INTERACTS WITH 1-naphthyl isothiocyanate; paracetamol; tetrachloromethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC308108; Znf541
Orthologs:
Homo sapiens (human) : ZNF541 (zinc finger protein 541)  HGNC  Alliance
Mus musculus (house mouse) : Zfp541 (zinc finger protein 541)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Znf541 (zinc finger protein 541)
Pan paniscus (bonobo/pygmy chimpanzee) : ZNF541 (zinc finger protein 541)
Canis lupus familiaris (dog) : ZNF541 (zinc finger protein 541)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Znf541 (zinc finger protein 541)
Sus scrofa (pig) : ZNF541 (zinc finger protein 541)
Heterocephalus glaber (naked mole-rat) : Znf541 (zinc finger protein 541)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0177,957,188 - 77,993,816 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl177,967,755 - 77,992,027 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0179,224,186 - 79,259,532 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4176,419,351 - 76,436,366 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1176,420,479 - 76,513,985 (+)NCBI
Celera171,240,446 - 71,276,972 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Zfp541
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310756
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.