Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Upk3a (uroplakin 3A) Rattus norvegicus
Analyze
Symbol: Upk3a
Name: uroplakin 3A
Description: Predicted to be involved in several processes, including monovalent inorganic cation homeostasis; renal system development; and urea transport. Predicted to localize to apical plasma membrane urothelial plaque. Orthologous to human UPK3A (uroplakin 3A); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC315190; uroplakin-3a
Orthologs:
Homo sapiens (human) : UPK3A (uroplakin 3A)  HGNC  Alliance
Mus musculus (house mouse) : Upk3a (uroplakin 3A)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Upk3a (uroplakin 3A)
Pan paniscus (bonobo/pygmy chimpanzee) : UPK3A (uroplakin 3A)
Canis lupus familiaris (dog) : UPK3A (uroplakin 3A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Upk3a (uroplakin 3A)
Sus scrofa (pig) : UPK3A (uroplakin 3A)
Chlorocebus sabaeus (African green monkey) : UPK3A (uroplakin 3A)
Heterocephalus glaber (naked mole-rat) : Upk3a (uroplakin 3A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07125,920,357 - 125,925,430 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7125,920,357 - 125,925,430 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07125,634,480 - 125,639,553 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47123,032,773 - 123,037,846 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17123,066,999 - 123,071,942 (+)NCBI
Celera7112,433,330 - 112,438,403 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Upk3a
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310633
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.