Uap1l1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1)

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Gene: Uap1l1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1) Rattus norvegicus

Analyze

Symbol:

Uap1l1

Name:

UDP-N-acetylglucosamine pyrophosphorylase 1 like 1

RGD ID:

1310630

Description:

Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Orthologous to human UAP1L1 (UDP-N-acetylglucosamine pyrophosphorylase 1 like 1); PARTICIPATES IN amino sugar metabolic pathway; nucleotide sugar metabolic pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC296560; UDP-N-acetylhexosamine pyrophosphorylase-like protein 1; UDP-N-acteylglucosamine pyrophosphorylase 1-like 1

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	8,172,335 - 8,180,505 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	8,173,216 - 8,180,443 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	11,280,328 - 11,285,601 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	19,866,558 - 19,871,831 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	18,056,401 - 18,061,674 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	2,579,250 - 2,584,523 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	2,579,258 - 2,584,523 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	2,560,663 - 2,565,936 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	3,526,396 - 3,531,669 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	3,527,348 - 3,531,629 (-)	NCBI
Celera	3	3,001,313 - 3,006,586 (-)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant intellectual developmental disorder 8 (ISO)

autosomal dominant nocturnal frontal lobe epilepsy 5 (ISO)

COVID-19 (ISO)

developmental and epileptic encephalopathy 14 (ISO)

epilepsy (ISO)

Immunodeficiency 103 (ISO)

Kleefstra syndrome 1 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-chloropropane-1,2-diol (EXP)

acetamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

choline (ISO)

cisplatin (ISO)

clofibrate (ISO)

clozapine (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

dicrotophos (ISO)

endosulfan (EXP)

entinostat (ISO)

ethyl methanesulfonate (ISO)

fenamidone (ISO)

finasteride (EXP)

folic acid (ISO)

formaldehyde (ISO)

gentamycin (EXP)

gold atom (ISO)

gold(0) (ISO)

hydrogen peroxide (ISO)

ivermectin (ISO)

L-methionine (ISO)

manganese(II) chloride (EXP)

metformin (ISO)

methyl methanesulfonate (ISO)

mono(2-ethylhexyl) phthalate (ISO)

Monobutylphthalate (ISO)

N-methyl-4-phenylpyridinium (EXP,ISO)

N-nitrosodiethylamine (ISO)

ozone (ISO)

paracetamol (ISO)

PCB138 (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

quercetin (ISO)

rotenone (EXP,ISO)

silicon dioxide (ISO)

sodium dichromate (EXP)

Soman (EXP)

sotorasib (ISO)

sunitinib (ISO)

temozolomide (ISO)

tetrachloromethane (EXP,ISO)

thioacetamide (EXP)

trametinib (ISO)

trichloroethene (EXP)

troglitazone (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

UDP-N-acetylglucosamine biosynthetic process (IBA)

Molecular Function

UDP-N-acetylglucosamine diphosphorylase activity (IBA)

Molecular Pathway Annotations Click to see Annotation Detail View

amino sugar metabolic pathway (IEA)

nucleotide sugar metabolic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932

Genomics

Comparative Map Data

Uap1l1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	8,172,335 - 8,180,505 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	8,173,216 - 8,180,443 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	11,280,328 - 11,285,601 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	19,866,558 - 19,871,831 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	18,056,401 - 18,061,674 (-)	NCBI	Rnor_WKY
Rnor_6.0	3	2,579,250 - 2,584,523 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	2,579,258 - 2,584,523 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	2,560,663 - 2,565,936 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	3,526,396 - 3,531,669 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	3,527,348 - 3,531,629 (-)	NCBI
Celera	3	3,001,313 - 3,006,586 (-)	NCBI		Celera
Cytogenetic Map	3	p13	NCBI

UAP1L1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	137,077,517 - 137,084,538 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	9	137,077,517 - 137,084,539 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	139,971,969 - 139,978,990 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	139,092,414 - 139,098,812 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	110,485,412 - 110,492,449 (+)	NCBI		Celera
Cytogenetic Map	9	q34.3	NCBI
HuRef	9	109,431,653 - 109,438,690 (+)	NCBI		HuRef
CHM1_1	9	140,120,762 - 140,127,799 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	149,313,412 - 149,320,433 (+)	NCBI		T2T-CHM13v2.0

Uap1l1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	25,251,501 - 25,255,695 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	25,249,901 - 25,255,694 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	25,361,489 - 25,365,682 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	25,359,889 - 25,365,682 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	25,217,012 - 25,221,146 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	25,183,501 - 25,187,635 (-)	NCBI		MGSCv36	mm8
MGSCv36	2	25,643,041 - 25,647,175 (-)	NCBI		MGSCv36	mm8
Cytogenetic Map	2	A3	NCBI

Uap1l1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955513	5,095,068 - 5,101,289 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955513	5,095,744 - 5,101,170 (+)	NCBI	ChiLan1.0	ChiLan1.0

UAP1L1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	9	137,108,764 - 137,115,793 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	137,108,764 - 137,115,793 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	9	108,138,569 - 108,145,644 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

LOC606974
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	48,528,738 - 48,532,888 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	47,721,753 - 47,726,203 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	49,396,677 - 49,401,108 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	9	48,172,994 - 48,177,420 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	48,471,811 - 48,475,118 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	48,519,013 - 48,523,442 (+)	NCBI		UU_Cfam_GSD_1.0

Uap1l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	202,490,506 - 202,496,676 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936669	876,803 - 884,560 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936669	878,938 - 884,469 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UAP1L1
(Sus scrofa - pig)

No map positions available.

UAP1L1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	1,106,245 - 1,113,363 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023667653	4,093 - 11,502 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Uap1l1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624760	834,606 - 839,970 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624760	834,605 - 839,983 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Uap1l1
8 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	319
Count of miRNA genes:	188
Interacting mature miRNAs:	221
Transcripts:	ENSRNOT00000017373
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70202	Alc19	Alcohol consumption QTL 19	2.5		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	3	1	27494778	Rat
631679	Cm10	Cardiac mass QTL 10	7.34	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	1	31158234	Rat
631831	Alc8	Alcohol consumption QTL 8	2.7		consumption behavior trait (VT:0002069)	calculated ethanol drink intake rate (CMO:0001615)	3	1	33230976	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	diastolic blood pressure (CMO:0000005)	3	1	33278763	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
61468	Bp15	Blood pressure QTL 15	4.4		blood pressure trait (VT:0000183)	pulse pressure (CMO:0000292)	3	1	33278763	Rat
631545	Bp85	Blood pressure QTL 85	3.1		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	33278763	Rat
4889966	Bss95	Bone structure and strength QTL 95	4.4		tibia area (VT:1000281)	tibia-fibula cross-sectional area (CMO:0001718)	3	1	36847613	Rat
2312664	Scl62	Serum cholesterol level QTL 62		0.05	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	1	38710544	Rat
631568	Bp92	Blood pressure QTL 92	2.2	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	1	39874793	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
1358185	Ept6	Estrogen-induced pituitary tumorigenesis QTL 6	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat
2292615	Ept17	Estrogen-induced pituitary tumorigenesis QTL 17	6.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	6537645	10778823	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	2	22	9		18				9	29	19	11
Low	1	21	48	41	1	41	8	11	65	6	22		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501837	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC168670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000017373 ⟹ ENSRNOP00000017373

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	8,173,216 - 8,180,443 (-)	Ensembl
Rnor_6.0 Ensembl	3	2,579,258 - 2,584,523 (-)	Ensembl

RefSeq Acc Id:

NM_001134516 ⟹ NP_001127988

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	8,175,210 - 8,180,483 (-)	NCBI
Rnor_6.0	3	2,579,250 - 2,584,523 (-)	NCBI
Rnor_5.0	3	2,560,663 - 2,565,936 (-)	NCBI
RGSC_v3.4	3	3,526,396 - 3,531,669 (-)	RGD
Celera	3	3,001,313 - 3,006,586 (-)	RGD

Sequence:

show sequence

TGCAGCTGGCCTGGTCTCGTGACATCGGTCAGAAAGTCACGAGTACGGGCTGAGCCTGCTGCTG
CAGTGGCACTATGGCCTCGGAGAGGGATGTGCGCGCAAAGCTGCAGCGCGCGGGCCAGGATCAC
CTCCTTCGCTTCTGGGCCGACCTGGCTCCGGAGCTCCGAGCGGCGCTGCTAGCTGAGCTCTCCT
CACTGGAGGCTGACGCGCTGCGTGAGCACTGCCAGCGCGCCTCAGCCGCCAGCGCGCTAGCCTC
GGGTCCTCTGCCGGACCTGGCGGCGCGCCTGCAGCCCCTGCCCCCAGAACGCTTGGGTAGCGCG
ATCCGCTGCGACCAAGAGACACGCCTGCGGTGGGAAGAGGAAGGTTTCCGACAGATTGCTCTGA
ACAAGGTAGCTGTCCTGCTGCTGGCCGGTGGGCAGGGCACTCGCCTGGGCGTCACCTACCCCAA
GGGCATGTATCAAGTTGGTCTGCCCAGCCAGAAGACCCTGTACCAACTGCAAGCAGAGCGGATC
CGGCGTGTTCAACAGTTGGCTGGTCAGCGACTGGGGACCCACTGCACCGTGCCCTGGTACATCA
TGACCAGTGAGTTTACACTAGGACCCACAATCAAGTTCTTCAAGGAGCACGACTTCTTTCACCT
AGACCCCGCTAACGTGGTGCTGTTCGAGCAGCGCATGCTACCTGCTGTGACCTTTGAGGGCAAG
GCCATCCTGGAACGGAAAGACAAAGTTGCCATGGCCCCAGATGGTAATGGAGGCCTGTACTGTG
CACTGGCTGACCACCAGATCCTGGAGGACATGGAGCAGCGGGGTGTGGAGTTTGTGCATGTGTA
CTGTGTCGACAACATCTTGGTGCGGTTGGCTGACCCAGCCTTCATTGGCTTCTGTGTGCTTCAG
GGAGCAGACTGTGGTGCAAAGGTCGTGGAGAAAGCGTACCCAGAAGAGCCAGTGGGTGTGGTGT
GCCAGGTGGACGGTGTCCCGCAGGTGGTTGAATACAGCGAGATCAGCCCTGAGATTGCTAGGCA
GTGTGGGGCTGATGGTGGCTTGCTCTACAACGCAGGCAACATCTGCAACCATTTCTTTACCAGA
GGCTTCCTGGATATGGTCATCAGGGAGTTTGAGCCCTTGCTGAAGCTGCATGTGGCTGTGAAGA
AGGTTCCGTACGTGGATGAGGAGGGAAATCTGGTAAAGCCGCTAAGACCGAATGGGATAAAGAT
GGAGAAGTTTGTGTTTGATGTGCTCCCGTTTGCTAAGAACTTTGTTGCCTTTGAAGTGTGTCGG
GAGGAGGAGTTCTCCCCACTGAAGAATGCTGACACAGCCGACAGGGACAATCCCTCCACCTCCA
GGCGAGCCTTACTAGTTCAGCACTACCGCTGGGCTCTCCAGGCTGGAGCCCACTTCCTGGATGT
ACACGGGGTCCAGCTTCCGGAGCAGTCTGGCCTGCTCCCAAATGGAGACCCTCCAGCCATCTGT
GAGATATCGCCCTTGGTGTCTTACTCTGGAGAGGGGTTGGAAACGTACCTGCAAGGCCGAAAAC
TCCAGTCTCCATTCATTCTGGATGAGGACCAAGCCAGGCTGCTGCAGTCACAGGAGTGCTAACC
GCTTGCTCCCAGGCTCTGGCCATGGGGTTCTGTAGGGTGGCGATGCAACTCTGGGTGAGGTTCC
AAGTGGAAATGCTAGCCTGCAGACATTGTCTTGACACTGAGACAAGTGTGCTGGTTGATTTCGA
AAGGCTGGGACTTCTTGGGTCCCCCCATGGATTCTGGTTGTCTCTCTGTGTGTGGGTTTTGTTT
GTTTTGTTTTTGTCTCCTTGCTGGCTCTAGGGCTTGGCTGAGAGGCAGGGGGTTAAGAACGTTG
GGAAACAGGGCTAGAAGAGGTTCAGGGTAGAGGGAGGGAAGTGTTATCTAGGAAGGCAGCACTG
GAGATGCCCTTCTAGCATCTCCCCCCGACCCCTGCTACCCAGCACACAGGCCAACACACAGGCT
CAGCAGACAGTGAGCTGTGCCATAGCGGGTGTAGTAAAAAGGCCTACCCTAGATAGCAGAACCA
TAACTGGAGGAAGGCTGAGCATGTCGTACCACGTGCCACACAGGACCAATAGAAGAAGCCAGAT
GCCAATGGTTAGGACCAGGTTGGAGGACTCTGACCTGCACACCTGAGATGAAAGATGAAATCTC
CCTAGACCTCTTCACACCCCGAGTCTCCCAGTCACACTTACCAGTGCGCCTGGCTGCTGTGTCC
TAAGTATTTTCCTCCCAGAACGAGAGATCGCACTGGTTGCCTTCTGCAACTGATTTTGACCCAG
ACAGGAGCACAGCTCATCTTGGTAAGTTGCTTTTCCCAGAGCTTAGAGCCAAAGCTCTAGGATG
GAGATGTAGCTTCTCTTTAAAGTGGCACTTGGCTCTGCCGCCTGGCCTTGTTCTGTCACTGGCT
GGACCTCCATGGACTCACAGCTGTTCTCCCATGCAGGAAATGATGACACTGGCCCTACCCTGTA
AAGTAACAGCAGTCAGGACAGACAGCCTCTCTGCAGCCACCTACCTACCCCAGACATGTGGGCT
CCTGCTCACTTCCTTTAGCTTTCCCACAGGAGGTCAGAGGGAGGAGTGAATTCATTCACCTTTG
GTGTGGAGCAGCGGACACAGATCTGGGGAAGATGGGAGGACCGGGCCTGCGGCTGCAATGGTTA
AACCAGCTTGTAGAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XR_005501837

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	8,172,335 - 8,180,505 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001127988	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68670	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001127988 ⟸ NM_001134516

- UniProtKB:

B5DEH4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASERDVRAKLQRAGQDHLLRFWADLAPELRAALLAELSSLEADALREHCQRASAASALASGPL
PDLAARLQPLPPERLGSAIRCDQETRLRWEEEGFRQIALNKVAVLLLAGGQGTRLGVTYPKGMY
QVGLPSQKTLYQLQAERIRRVQQLAGQRLGTHCTVPWYIMTSEFTLGPTIKFFKEHDFFHLDPA
NVVLFEQRMLPAVTFEGKAILERKDKVAMAPDGNGGLYCALADHQILEDMEQRGVEFVHVYCVD
NILVRLADPAFIGFCVLQGADCGAKVVEKAYPEEPVGVVCQVDGVPQVVEYSEISPEIARQCGA
DGGLLYNAGNICNHFFTRGFLDMVIREFEPLLKLHVAVKKVPYVDEEGNLVKPLRPNGIKMEKF
VFDVLPFAKNFVAFEVCREEEFSPLKNADTADRDNPSTSRRALLVQHYRWALQAGAHFLDVHGV
QLPEQSGLLPNGDPPAICEISPLVSYSGEGLETYLQGRKLQSPFILDEDQARLLQSQEC

hide sequence

RefSeq Acc Id:

ENSRNOP00000017373 ⟸ ENSRNOT00000017373

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DEH4-F1-model_v2	AlphaFold	B5DEH4	1-507	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13691873

Promoter ID:

EPDNEW_R2398

Type:

initiation region

Name:

Uap1l1_1

Description:

UDP-N-acetylglucosamine pyrophosphorylase 1 like 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	2,584,458 - 2,584,518	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1310630	AgrOrtholog
BioCyc Gene	G2FUF-50459	BioCyc
Ensembl Genes	ENSRNOG00000012960	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000017373	ENTREZGENE
	ENSRNOP00000017373.5	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017373	ENTREZGENE
	ENSRNOT00000017373.7	UniProtKB/TrEMBL
Gene3D-CATH	3.90.550.10	UniProtKB/TrEMBL
InterPro	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
	UDP-sugar_pyrophosphorylase	UniProtKB/TrEMBL
	UDPGP_trans	UniProtKB/TrEMBL
KEGG Report	rno:296560	UniProtKB/TrEMBL
NCBI Gene	296560	ENTREZGENE
PANTHER	PTHR11952	UniProtKB/TrEMBL
Pfam	UDPGP	UniProtKB/TrEMBL
PhenoGen	Uap1l1	PhenoGen
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	B5DEH4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-13	Uap1l1	UDP-N-acetylglucosamine pyrophosphorylase 1 like 1	Uap1l1	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Uap1l1	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	Uap1l1_predicted	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Uap1l1_predicted	UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - KEGG (archival)