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Gene: RGD1310553 (similar to expressed sequence AI597479) Rattus norvegicus
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Symbol: RGD1310553
Name: similar to expressed sequence AI597479
Description: Predicted to be involved in embryonic morphogenesis. Predicted to localize to the tRNA-splicing ligase complex. Orthologous to human C2orf49 (chromosome 2 open reading frame 49); INTERACTS WITH bisphenol A; cadmium dichloride; vinclozolin.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ashwin; LOC301374; MGC105902
Orthologs:
Homo sapiens (human) : C2orf49 (chromosome 2 open reading frame 49)  HGNC  Alliance
Mus musculus (house mouse) : AI597479 (expressed sequence AI597479)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102026964 (chromosome unknown open reading frame, human C2orf49)
Pan paniscus (bonobo/pygmy chimpanzee) : C2AH2orf49 (chromosome 2A C2orf49 homolog)
Canis lupus familiaris (dog) : C10H2orf49 (chromosome 10 C2orf49 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH2orf49 (chromosome unknown C2orf49 homolog)
Sus scrofa (pig) : C3H2orf49 (chromosome 3 C2orf49 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0949,903,085 - 49,913,754 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0949,573,659 - 49,584,328 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4942,302,028 - 42,312,697 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1942,303,441 - 42,314,110 (+)NCBI
Celera943,089,365 - 43,100,034 (+)NCBICelera
Cytogenetic Map9q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on RGD1310553
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310553
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.