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Gene: Ddx47 (DEAD-box helicase 47) Rattus norvegicus
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Symbol: Ddx47
Name: DEAD-box helicase 47
Description: Predicted to have RNA binding activity and RNA helicase activity. Predicted to be involved in RNA splicing; extrinsic apoptotic signaling pathway via death domain receptors; and rRNA processing. Predicted to localize to the nucleolus. Orthologous to human DDX47 (DEAD-box helicase 47); INTERACTS WITH 17beta-estradiol; atrazine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: DEAD (Asp-Glu-Ala-Asp) box polypeptide 47; LOC297685; MGC105650; probable ATP-dependent RNA helicase DDX47
Orthologs:
Homo sapiens (human) : DDX47 (DEAD-box helicase 47)  HGNC  Alliance
Mus musculus (house mouse) : Ddx47 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 47)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddx47 (DEAD-box helicase 47)
Pan paniscus (bonobo/pygmy chimpanzee) : DDX47 (DEAD-box helicase 47)
Canis lupus familiaris (dog) : DDX47 (DEAD-box helicase 47)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddx47 (DEAD-box helicase 47)
Sus scrofa (pig) : DDX47 (DEAD-box helicase 47)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04168,775,134 - 168,787,594 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04233,045,472 - 233,060,508 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44171,928,195 - 171,940,648 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14172,173,130 - 172,185,583 (+)NCBI
Celera4156,442,112 - 156,454,572 (+)NCBICelera
Cytogenetic Map4q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ddx47
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310437
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.