Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cops5 (COP9 signalosome subunit 5) Rattus norvegicus
Analyze
Symbol: Cops5
Name: COP9 signalosome subunit 5
Description: Predicted to have enzyme binding activity; macrophage migration inhibitory factor binding activity; and peptidase activity, acting on L-amino acid peptides. Predicted to be involved in several processes, including protein modification by small protein removal; regulation of cellular response to stress; and regulation of transcription, DNA-templated. Predicted to colocalize with the chromatin. Orthologous to human COPS5 (COP9 signalosome subunit 5); PARTICIPATES IN hypoxia inducible factor pathway; INTERACTS WITH 2,4-dinitrotoluene; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: COP9 (constitutive photomorphogenic) homolog, subunit 5; COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana); COP9 constitutive photomorphogenic homolog subunit 5; COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis); COP9 signalosome complex subunit 5; LOC312916; MGC112728
Orthologs:
Homo sapiens (human) : COPS5 (COP9 signalosome subunit 5)  HGNC  Alliance
Mus musculus (house mouse) : Cops5 (COP9 signalosome subunit 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cops5 (COP9 signalosome subunit 5)
Pan paniscus (bonobo/pygmy chimpanzee) : COPS5 (COP9 signalosome subunit 5)
Canis lupus familiaris (dog) : COPS5 (COP9 signalosome subunit 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cops5 (COP9 signalosome subunit 5)
Sus scrofa (pig) : COPS5 (COP9 signalosome subunit 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.058,876,090 - 8,894,345 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl58,876,044 - 8,894,339 (+)Ensembl
Rnor_5.0513,684,111 - 13,702,378 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.458,709,214 - 8,727,277 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.158,709,213 - 8,727,277 (+)NCBI
Celera58,703,366 - 8,721,421 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cops5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310301
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.