Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Rbm39 (RNA binding motif protein 39) Rattus norvegicus
Symbol: Rbm39
Name: RNA binding motif protein 39
Description: Predicted to have RNA binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to localize to centriolar satellite; nuclear speck; and protein-containing complex. Orthologous to human RBM39 (RNA binding motif protein 39); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC362251; MGC109490; RNA-binding protein 39; RNA-binding region (RNP1, RRM) containing 2; RNA-binding region-containing 2; Rnp1; Rnpc2; Rrm
Homo sapiens (human) : RBM39 (RNA binding motif protein 39)  HGNC  Alliance
Mus musculus (house mouse) : Rbm39 (RNA binding motif protein 39)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rbm39 (RNA binding motif protein 39)
Pan paniscus (bonobo/pygmy chimpanzee) : RBM39 (RNA binding motif protein 39)
Canis lupus familiaris (dog) : RBM39 (RNA binding motif protein 39)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rbm39 (RNA binding motif protein 39)
Sus scrofa (pig) : RBM39 (RNA binding motif protein 39)
Chlorocebus sabaeus (African green monkey) : RBM39 (RNA binding motif protein 39)
Heterocephalus glaber (naked mole-rat) : Rbm39 (RNA binding motif protein 39)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.03151,691,498 - 151,724,723 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,691,514 - 151,724,654 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03158,056,123 - 158,089,351 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43146,555,202 - 146,587,650 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13146,461,112 - 146,493,559 (-)NCBI
Celera3143,385,461 - 143,417,910 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
More on Rbm39
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310071
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.