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Gene: Supt16h (SPT16 homolog, facilitates chromatin remodeling subunit) Rattus norvegicus
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Symbol: Supt16h
Name: SPT16 homolog, facilitates chromatin remodeling subunit
Description: Predicted to have histone binding activity and nucleosome binding activity. Predicted to be involved in DNA replication-independent nucleosome organization; positive regulation of transcription elongation from RNA polymerase II promoter; and transcription elongation from RNA polymerase II promoter. Predicted to localize to the FACT complex. Orthologous to human SUPT16H (SPT16 homolog, facilitates chromatin remodeling subunit); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; INTERACTS WITH 2,6-dinitrotoluene; bisphenol A; C60 fullerene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: FACT complex subunit SPT16; LOC305851; suppressor of Ty 16 homolog; suppressor of Ty 16 homolog (S. cerevisiae)
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01528,574,841 - 28,611,959 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1528,575,480 - 28,611,946 (-)Ensembl
Rnor_5.01532,385,107 - 32,422,226 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41527,604,676 - 27,641,794 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11527,620,377 - 27,657,927 (-)NCBI
Celera1525,171,514 - 25,208,618 (-)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Supt16h
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1310032
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.