Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atl3 (atlastin GTPase 3) Rattus norvegicus
Analyze
Symbol: Atl3
Name: atlastin GTPase 3
Description: Predicted to have GTP binding activity; GTPase activity; and identical protein binding activity. Predicted to be involved in several processes, including Golgi organization; positive regulation of endoplasmic reticulum tubular network organization; and protein homooligomerization. Predicted to localize to several cellular components, including the endoplasmic reticulum tubular network; endoplasmic reticulum tubular network membrane; and exocytic vesicle. Human ortholog(s) of this gene implicated in hereditary sensory neuropathy type 1F. Orthologous to human ATL3 (atlastin GTPase 3); INTERACTS WITH 17beta-estradiol; bisphenol A; dibutyl phthalate.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: atlastin 3; atlastin-3; atlastin-3-like; LOC309187; RGD1309871; similar to RIKEN cDNA 5730596K20
Orthologs:
Homo sapiens (human) : ATL3 (atlastin GTPase 3)  HGNC  Alliance
Mus musculus (house mouse) : Atl3 (atlastin GTPase 3)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atl3 (atlastin GTPase 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ATL3 (atlastin GTPase 3)
Canis lupus familiaris (dog) : ATL3 (atlastin GTPase 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atl3 (atlastin GTPase 3)
Sus scrofa (pig) : ATL3 (atlastin GTPase 3)
Chlorocebus sabaeus (green monkey) : ATL3 (atlastin GTPase 3)
Heterocephalus glaber (naked mole-rat) : Atl3 (atlastin GTPase 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01222,746,023 - 222,788,439 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1222,746,023 - 222,786,942 (+)Ensembl
Rnor_5.01229,732,744 - 229,775,614 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41210,177,817 - 210,219,558 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11210,336,514 - 210,377,846 (+)NCBI
Celera1202,213,164 - 202,254,102 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Atl3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309871
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.