Myorg (myogenesis regulating glycosidase)

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Gene: Myorg (myogenesis regulating glycosidase) Rattus norvegicus

Analyze

Symbol:

Myorg

Name:

myogenesis regulating glycosidase

RGD ID:

1309821

Description:

Predicted to enable hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in skeletal muscle fiber development. Predicted to act upstream of or within positive regulation of insulin-like growth factor receptor signaling pathway and positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction. Predicted to be located in endoplasmic reticulum membrane and nuclear membrane. Human ortholog(s) of this gene implicated in basal ganglia calcification. Orthologous to human MYORG (myogenesis regulating glycosidase (putative)); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acetamide; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC366360; LOC366360; myogenesis-regulating glycosidase; RGD1309821; similar to KIAA1161 protein; uncharacterized family 31 glucosidase KIAA1161 homolog; uncharacterized protein LOC366360

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYORG (myogenesis regulating glycosidase (putative))	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Myorg (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Myorg (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYORG (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYORG (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYORG (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYORG (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myorg (myogenesis regulating glycosidase (putative))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MYORG (myogenesis regulating glycosidase (putative))	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Myorg (myogenesis regulating glycosidase (putative))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:ch211-117c19.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myorg	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	tobi	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myorg	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	5	56,654,257 - 56,664,467 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	56,648,643 - 56,664,440 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	58,641,435 - 58,646,878 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	60,460,239 - 60,465,682 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	60,440,961 - 60,446,404 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	57,873,404 - 57,882,008 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	57,876,498 - 57,881,944 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	62,402,424 - 62,409,832 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	58,917,805 - 58,923,251 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	58,917,973 - 58,920,155 (-)	NCBI
Celera	5	55,254,804 - 55,260,248 (-)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acromesomelic dysplasia, Maroteaux type (ISO)

anauxetic dysplasia (ISO)

distal arthrogryposis type 1A (ISO)

frontotemporal dementia and/or amyotrophic lateral sclerosis-6 (ISO)

galactosemia (ISO)

genetic disease (ISO)

Idiopathic Basal Ganglia Calcification 7 (ISO)

primary ciliary dyskinesia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4,4'-sulfonyldiphenol (ISO)

4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

acrylamide (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (EXP)

clothianidin (ISO)

cobalt dichloride (EXP)

dicrotophos (ISO)

diuron (EXP)

ethanol (ISO)

fenthion (ISO)

flutamide (EXP)

furan (EXP)

gentamycin (EXP)

glycidol (EXP)

Methylazoxymethanol acetate (EXP)

N-methyl-4-phenylpyridinium (ISO)

nefazodone (EXP)

paracetamol (EXP)

perfluorononanoic acid (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

tetrachloromethane (EXP,ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate metabolic process (IEA)

positive regulation of insulin-like growth factor receptor signaling pathway (ISO)

positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ISO)

skeletal muscle fiber development (IBA,ISO)

Cellular Component

endoplasmic reticulum membrane (ISO)

nuclear membrane (ISO)

Molecular Function

hydrolase activity, hydrolyzing O-glycosyl compounds (IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19706595

Genomics

Comparative Map Data

Myorg
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	5	56,654,257 - 56,664,467 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	56,648,643 - 56,664,440 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	58,641,435 - 58,646,878 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	60,460,239 - 60,465,682 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	60,440,961 - 60,446,404 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	57,873,404 - 57,882,008 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	57,876,498 - 57,881,944 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	62,402,424 - 62,409,832 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	58,917,805 - 58,923,251 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	58,917,973 - 58,920,155 (-)	NCBI
Celera	5	55,254,804 - 55,260,248 (-)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

MYORG
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	34,366,666 - 34,376,898 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	34,366,666 - 34,376,898 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	34,366,664 - 34,376,896 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	34,358,907 - 34,366,894 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	34,300,413 - 34,308,399 (-)	NCBI		Celera
Cytogenetic Map	9	p13.3	NCBI
HuRef	9	34,323,996 - 34,331,984 (-)	NCBI		HuRef
CHM1_1	9	34,368,669 - 34,376,658 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	34,385,154 - 34,395,421 (-)	NCBI		T2T-CHM13v2.0

Myorg
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	41,495,601 - 41,503,132 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	41,495,604 - 41,503,076 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	41,491,847 - 41,503,135 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	41,495,604 - 41,503,076 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	41,442,637 - 41,450,109 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	41,684,274 - 41,691,728 (-)	NCBI		MGSCv36	mm8
Celera	4	41,156,888 - 41,164,370 (-)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	21.69	NCBI

Myorg
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955472	1,735,292 - 1,740,304 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955472	1,735,292 - 1,740,304 (+)	NCBI	ChiLan1.0	ChiLan1.0

MYORG
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	9	90,233,136 - 90,243,691 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	34,205,177 - 34,213,351 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	35,013,976 - 35,022,065 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	35,015,847 - 35,017,991 (-)	Ensembl	panpan1.1		panPan2

MYORG
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	51,070,088 - 51,077,595 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	51,071,707 - 51,073,851 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	49,699,649 - 49,707,145 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	52,012,064 - 52,019,568 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	52,001,553 - 52,019,375 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	50,674,765 - 50,682,260 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	50,542,862 - 50,550,362 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	51,307,660 - 51,315,160 (-)	NCBI		UU_Cfam_GSD_1.0

MYORG
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	32,436,656 - 32,443,968 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	32,436,349 - 32,443,971 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

MYORG
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	46,235,327 - 46,243,153 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	46,240,208 - 46,242,352 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	43,352,599 - 43,360,841 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myorg
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624736	38,775,648 - 38,786,112 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Myorg
28 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	642
Count of miRNA genes:	276
Interacting mature miRNAs:	348
Transcripts:	ENSRNOT00000033235
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	1	90450412	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	1	131345958	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	729470	86724018	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	2282226	69540447	Rat
7394712	Emca13	Estrogen-induced mammary cancer QTL 13			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	9823266	99753708	Rat
1641903	Alcrsp3	Alcohol response QTL 3			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	12689285	57689285	Rat
634305	Mamtr1	Mammary tumor resistance QTL 1		0.0001	mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	12789751	113558310	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	18873947	63873947	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	18873947	74251464	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	21226744	66226744	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	27955440	72955440	Rat
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	27955440	72955440	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	28515489	73515489	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	28515489	73515489	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	31663789	131345958	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	33215665	78215665	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33215665	78215665	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	33215665	78215665	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	34730116	104251008	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	34944474	113558310	Rat
1641922	Alcrsp8	Alcohol response QTL 8			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	5	35189153	68564008	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35189153	141643988	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40128307	148607290	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	43726656	86724018	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	43726656	129132602	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	47869062	90099692	Rat
9589025	Epfw7	Epididymal fat weight QTL 7	20.66	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	5	49463600	94463600	Rat
7411561	Bw134	Body weight QTL 134	24	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	49463600	94463600	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	50328551	141643988	Rat
2303615	Vencon7	Ventilatory control QTL 7		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	5	50983895	95983895	Rat
2303574	Gluco42	Glucose level QTL 42	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	53496719	98496719	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	55715622	100715622	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55805606	132207589	Rat

Markers in Region

RH143919

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	56,660,006 - 56,660,200 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	57,877,560 - 57,877,753	NCBI	Rnor6.0
Rnor_5.0	5	62,405,388 - 62,405,581	UniSTS	Rnor5.0
RGSC_v3.4	5	58,918,867 - 58,919,060	UniSTS	RGSC3.4
Celera	5	55,255,866 - 55,256,059	UniSTS
Cytogenetic Map	5	q22	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	2	1	30	28	3	28	8	11	26	8	7	11	8
Low	1	42	27	13	16	13			48	27	34
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005504505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005504506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000033235 ⟹ ENSRNOP00000033466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	56,656,874 - 56,664,440 (-)	Ensembl
Rnor_6.0 Ensembl	5	57,876,498 - 57,881,944 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000097916 ⟹ ENSRNOP00000077557

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	56,654,073 - 56,664,440 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000098318 ⟹ ENSRNOP00000093769

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	56,648,643 - 56,664,440 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000098360 ⟹ ENSRNOP00000076461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	56,656,561 - 56,664,438 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000112042 ⟹ ENSRNOP00000087690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	56,656,982 - 56,662,419 (-)	Ensembl

RefSeq Acc Id:

NM_001108971 ⟹ NP_001102441

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	56,658,945 - 56,664,391 (-)	NCBI
Rnor_6.0	5	57,876,498 - 57,881,944 (-)	NCBI
Rnor_5.0	5	62,402,424 - 62,409,832 (-)	NCBI
RGSC_v3.4	5	58,917,805 - 58,923,251 (-)	RGD
Celera	5	55,254,804 - 55,260,248 (-)	RGD

Sequence:

show sequence

TGATCAACTCCTGCTAGCGTGGAGAGAGGATCAGCTGGAGGACCCTTCTTCCCTTCTTTGTGGC
GGTCACTGAGAGTTCTCACCGATTTGGCAAGCCGTGGGGCCTGAGAGAAACAAGGACATCAGCA
CGACAGTTTCAGATGGGCCCTGGTGTGGTGGTTCCTTTCTTAGCTAGGAACTGATGCCCCAGAA
CCTTCAGGAGAAGAGCCAGGTCTACCCCAGACATCGACTTGGTAGCCACGCAGGCCCTAAAAGT
CTCGAAGTTATCCCAGGAGCAACCATGTACACTTTCCTGCCTGACAATTTTTCACCTGCCAAAC
CCAAGCCCACTAAAGAGCTGAGGCCTCTGCTATGCTCCGTGGTACTGGGACTGCTGCTGGTGCT
GGCCGCAGTTGTGGCCTGGTGCTACTATAGCGCCTCCTTACGCAAAGCTGAACGCCTGCGCGCA
GAGCTGCTGGACCTGAACCGTGGCGGCTTCTCCATCCGTAACCAGAAGGGTGAGCAAGTCTTCC
GCTTGGCCTTCCGTTCGGGTGCGCTGGATCTTGACTCCTGTAGCCGGGACGGTGCCCTGCTTGG
CTGCTCCCGAACGGCCGATGGGCGCCCGTTGCACTTCTTTATCCAGACTGTACGACCCAAGGAC
ACTGTAATGTGCTACCGCGTGCGCTGGGAGGAAGCTGCACCAGGGCGTGCTGTAGAGCACGCGA
TGTTTCTGGGAGATGCTGCAGCGCACTGGTATGGTGGCGCAGAGATGAGGACGCAACACTGGCC
CATCCGCCTAGATGGCCAGCAAGAGCCGCAGCCATTTGTCACGAGCGACGTCTACTCTTCTGAC
GCCGCATTCGGGGGCATCCTTGAGCGCTACTGGCTATCTTCCCGCGCGGCCGCCATCAAAGTCA
ATGATTCAGTGCCCTTCCACCTGGGCTGGAACAGCACCGAGCGTTCGATGAGATTGCAGGCACG
CTACCACCACACATCTTACAAGCCACCAGCCGGCCGGACTGCAGCGCCAGAGCTCAGCTACCGC
GTGTGCGTGGGCTCAGATGTCACCTCCATCCACAAGTACATGGTTCGACGTTACTTCAACAAAC
CGTCCAGGGTACCAGCGTCAGAGGCCTTCCGAGACCCCATTTGGTCCACGTGGGCTCTATATGG
GCGCTCTGTGGACCAGAACAAGGTGCTGCAATTCGCCCAGCAGATCCGCCAGCACCGCTTCAAC
AGCAGCCATCTGGAAATCGATGACATGTACACGCCGGCCTATGGTGACTTTGATTTCGACGAGA
GCAAGTTCCCCAACGCCACTGACCTGTTCCACCGCCTGCGAGATGCTGGCTTCCGCGTCACACT
TTGGGTGCATCCGTTTGTCAACTATAACTCGTCGCGTTTCGGCGAAGGTGTGGAGCGCGAGCTG
TTCGTGCGGGAGCCCACGGGCCGCCTGCCCGCGCTCGTGCGCTGGTGGAACGGCATTGGCGCGG
TGCTGGACTTCACGCGCCCAGAGGCCCGAGAGTGGTTCCAGGGACACCTACGGCGCCTGCGCTC
GCGCTACAACGTGGCCTCCTTTAAGTTCGACGCGGGTGAAGTCAGCTACCTGCCCCCGGACTTC
AGCACCTACAAGCCTCTGTCTGACCCCAGTGTGTGGAGCAGGCGGTACACCGAGATGGCGCTGC
CCTTCTTCTCGCTAGCCGAAGTCCGCGTGGGGTACCAGTCACAGAACATCTCCTGCTTCTTCCG
TCTAGTGGACCGCGACTCGGTATGGGGCTACGACCTGGGGCTGCGCTCTCTCATCCCTGCGGTG
CTCACCGTCAGTATGCTGGGCTATCCGTTCATCTTACCTGATATGATAGGTGGCAACGCGGTGC
CGGAGCGCACAGCGGGCCGCCCAGATGGGCCGGGGCCAGAGCGCGAACTCTACGTGCGCTGGCT
GGAGGTGGCCGCCTTCATGCCTGCCATGCAGTTTTCAATCCCTCCTTGGCAGTATGACGCAGAA
GTGGTAGCCATCGCACATAAATTCGCTGCTCTGCGCGCCTCCCTCGTGGCGCCACTGCTGCTGG
AGCTTGCTGGTGAGGTCACCGACACGGGCGACCCCATCGTGCGCCCCCTGTGGTGGATCGCACC
CGGGGATGAAACGGCTCACCGCATTGACTCACAGTTCCTCATCGGGGACACGCTGTTGGTGGCA
CCGGTACTGGAACCTGGTAAGCAAGAGCGCGATGTCTACCTGCCTGCCGGCAAATGGCGAAGTT
ACAAGGGTGAGCTTTTTGACAAGACGCCTGTGCTGCTCACGGATTACCCTGTCGACCTGGATGA
GGTCGCCTATTTCACCTGGGCTTCCTGA

hide sequence

RefSeq Acc Id:

XM_006238094 ⟹ XP_006238156

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	56,657,046 - 56,664,460 (-)	NCBI
Rnor_6.0	5	57,873,404 - 57,882,008 (-)	NCBI
Rnor_5.0	5	62,402,424 - 62,409,832 (-)	NCBI

Sequence:

show sequence

GGAGGGCGGGGCGCAGGAGGGGCTCCACGGTGCCCAGCCAGGCAGCACCCCGCAGGGCTGTGGC
TGATCAACTCCTGCTAGCGTGGAGAGAGGATCAGCTGGAGGACCCTTCTTCCCTTCTTTGTGGC
GGTCACTGAGACATCAGCACGACAGTTTCAGATGGGCCCTGGTGTGGTGGTTCCTTTCTTAGCT
AGGAACTGATGCCCCAGAACCTTCAGGAGAAGAGCCAGGTCTACCCCAGACATCGACTTGGTAG
CCACGCAGGCCCTAAAAGTCTCGAAGTTATCCCAGGAGCAACCATGTACACTTTCCTGCCTGAC
AATTTTTCACCTGCCAAACCCAAGCCCACTAAAGAGCTGAGGCCTCTGCTATGCTCCGTGGTAC
TGGGACTGCTGCTGGTGCTGGCCGCAGTTGTGGCCTGGTGCTACTATAGCGCCTCCTTACGCAA
AGCTGAACGCCTGCGCGCAGAGCTGCTGGACCTGAACCGTGGCGGCTTCTCCATCCGTAACCAG
AAGGGTGAGCAAGTCTTCCGCTTGGCCTTCCGTTCGGGTGCGCTGGATCTTGACTCCTGTAGCC
GGGACGGTGCCCTGCTTGGCTGCTCCCGAACGGCCGATGGGCGCCCGTTGCACTTCTTTATCCA
GACTGTACGACCCAAGGACACTGTAATGTGCTACCGCGTGCGCTGGGAGGAAGCTGCACCAGGG
CGTGCTGTAGAGCACGCGATGTTTCTGGGAGATGCTGCAGCGCACTGGTATGGTGGCGCAGAGA
TGAGGACGCAACACTGGCCCATCCGCCTAGATGGCCAGCAAGAGCCGCAGCCATTTGTCACGAG
CGACGTCTACTCTTCTGACGCCGCATTCGGGGGCATCCTTGAGCGCTACTGGCTATCTTCCCGC
GCGGCCGCCATCAAAGTCAATGATTCAGTGCCCTTCCACCTGGGCTGGAACAGCACCGAGCGTT
CGATGAGATTGCAGGCACGCTACCACCACACATCTTACAAGCCACCAGCCGGCCGGACTGCAGC
GCCAGAGCTCAGCTACCGCGTGTGCGTGGGCTCAGATGTCACCTCCATCCACAAGTACATGGTT
CGACGTTACTTCAACAAACCGTCCAGGGTACCAGCGTCAGAGGCCTTCCGAGACCCCATTTGGT
CCACGTGGGCTCTATATGGGCGCTCTGTGGACCAGAACAAGGTGCTGCAATTCGCCCAGCAGAT
CCGCCAGCACCGCTTCAACAGCAGCCATCTGGAAATCGATGACATGTACACGCCGGCCTATGGT
GACTTTGATTTCGACGAGAGCAAGTTCCCCAACGCCACTGACCTGTTCCACCGCCTGCGAGATG
CTGGCTTCCGCGTCACACTTTGGGTGCATCCGTTTGTCAACTATAACTCGTCGCGTTTCGGCGA
AGGTGTGGAGCGCGAGCTGTTCGTGCGGGAGCCCACGGGCCGCCTGCCCGCGCTCGTGCGCTGG
TGGAACGGCATTGGCGCGGTGCTGGACTTCACGCGCCCAGAGGCCCGAGAGTGGTTCCAGGGAC
ACCTACGGCGCCTGCGCTCGCGCTACAACGTGGCCTCCTTTAAGTTCGACGCGGGTGAAGTCAG
CTACCTGCCCCCGGACTTCAGCACCTACAAGCCTCTGTCTGACCCCAGTGTGTGGAGCAGGCGG
TACACCGAGATGGCGCTGCCCTTCTTCTCGCTAGCCGAAGTCCGCGTGGGGTACCAGTCACAGA
ACATCTCCTGCTTCTTCCGTCTAGTGGACCGCGACTCGGTATGGGGCTACGACCTGGGGCTGCG
CTCTCTCATCCCTGCGGTGCTCACCGTCAGTATGCTGGGCTATCCGTTCATCTTACCTGATATG
ATAGGTGGCAACGCGGTGCCGGAGCGCACAGCGGGCCGCCCAGATGGGCCGGGGCCAGAGCGCG
AACTCTACGTGCGCTGGCTGGAGGTGGCCGCCTTCATGCCTGCCATGCAGTTTTCAATCCCTCC
TTGGCAGTATGACGCAGAAGTGGTAGCCATCGCACATAAATTCGCTGCTCTGCGCGCCTCCCTC
GTGGCGCCACTGCTGCTGGAGCTTGCTGGTGAGGTCACCGACACGGGCGACCCCATCGTGCGCC
CCCTGTGGTGGATCGCACCCGGGGATGAAACGGCTCACCGCATTGACTCACAGTTCCTCATCGG
GGACACGCTGTTGGTGGCACCGGTACTGGAACCTGGTAAGCAAGAGCGCGATGTCTACCTGCCT
GCCGGCAAATGGCGAAGTTACAAGGGTGAGCTTTTTGACAAGACGCCTGTGCTGCTCACGGATT
ACCCTGTCGACCTGGATGAGGTCGCCTATTTCACCTGGGCTTCCTGACCCAGCTCAGAACCTAG
GAATCCCACAGCCCTAACCCCAGCCTTCATACAAACTTTTAATCCTCTACCACGCGCGAACGGT
GAACCCTCAGGAAGACCCCACCTCTATACCATCTAGGAAGTGGGCACCGACTTTAAAGTGCTCC
AGCCAACAGCTGTAGATGAGACCTGGGAGGGGAGGTATTGAAACAACCCCTGCACCAGCGCACA
ATCCTAAGAGTCCCGGTTCCTTGACCATTCGCTCCAGTCTGCAGAAAGCCTCTCCCTTGGGTTG
GAGGGCAGAGAACTGAGAGGACAAAGATCTGTTCTTTGTGTTACACAGGGTCTGGTTTTAAAAG
CACAGAAAGAAACCTCTCCTCCCACCCTGGTCTTTGTAGCCATCCTTGTCCTCTGAAATGAGGA
ACCAATCCTCTTTAAAAGTTCCCAAATAGTTTTCTGCCATATTTAGAAAGTGTACCTTTAACCT
GGTGTTGGTGGGATATGCCTTTAATACCAGCACTCAGGAAGCAGAGAGACAGGTGGATCTCCGA
GATCAAGGCCAGCATGGTCTACAGATCGAGTTCCAGGAAGCCAGCGCTACGCAGAGAAACTCTA
TCTCCAAAAAACTGAAGGAAGGAAGGAAAGAAGAAAGGAAGGAAGGAAGAAAGGAAGGAAGAAG
AGAAAGTCTACCTTCTTGATGACAGCAGCTAAGCCATGAGCTCCCAGCACACACCTGAACAGTG
ACTGACCTGCTCTCACTCGATCTGGGGAAGAAAGATACACAGATGTTTGGTTTGGCCAGCTGAC
CAGGAAGCAAAAGGCCTCTTCCCAGTCCATAGGAGAATTGAACTGAACTAATGTTCTCTGTCTG
TGAGAAAGACTCCTAACATGCGTTAACATATTTGTATGTATTCATACCCAGACCTGGGCCAGAT
GTGCCTAGTAGATAGACTTGCAGGGTCATGCAGGCCGGACTCGTTGCCTTAATTCAAGAACCTG
TGTCTATGTGTATGTACACATACTTCTGTCAGGGCAGTGGGGAGGGAGAGAGGGAGAGAGGCGC
CCACCATGGGTCTCTGAAATATTCCTGAGGCTAGATAAGCCTAGAGGGAGGATACGGAGGCAGC
CTCAGGGCTTTGATTATGATCTAAGCCCCATTTTAGGTAGACTCCCTAGGATACTGCCAAACCC
AGTTTAAGAGTTTAAAACTGGAGAACTGGGCTGAGGAACTGACTCAGAAGACAAGCCTGACTAC
CTGAGTTCAGCCTAACTCCTGCTGTAAAAGGAGAGAACGGACAATAGGGTAAGCCCTTTAAGAT
TACCCAGCTGCCTCCCTGCACACACGCTCTGAGTGTAGCCCGAACGGGAAAACCATGTTCTATG
CTGGCAGAGATGTGCTTGGCACACGAATGACATTACACGCTGATAACCTGCCAGCACACGTATG
GGGAAGGGCTTTCATCTCAGTAATTCTCTTGTTCTAAGAAGATCAACTCCAGCTACCGTGAGGT
GAGTTTTTCCTGATTTGCCAGAGAAGGTGGGGAATGAAGTGGGGCTCAGCTTCCCTCTCAGAGC
CTGTGCCCGAATCATTCGTTTTCTCTGGGTGAAAGGTCCTGGTGAGAGCTTCAGGGCTCCCCAG
ACGCCCATCTCCATGCCAATTCTTTTGTTTCTTTTCCTTGGCAATGCTGAAGCTAGAACCCAGG
GCCCCAAGCATACTAAGTAAGCATTCTTCCTCAGCTCTATCCTCGGTCTTCAGCCAGCCGGGTG
ACCTTGAATAAGCTGCTGCCTACCCCACTGAGCCTCAGTGTTTTCTGTGTAAGGGTGATGTAAT
GCCTACCTCTAAGGTCACTTTAATAATAAGCACAGACATATGGAAAGTGCCTGACACCAAGTAG
GTGCTCAATAAAAGATAGCTATTGTAGTAGTGTTTGCTGTTCTCTTGCTTAAATTCAAGAATTC
TTAGGGGTTTAAAAAGACTTATTGATGCATGAATGTTTGCCCGCCTGTATGTATGTATGTATGT
ACGTATGTATGTATGCATGCATGCAACCACATGCATGCCTGGTATTTATGGAGGTTGGAAAAGG
GCATCAGATCCCCTGGAACTAATGTTTTAGATGGTTGTGAGCCACCATGTGGACGCTGGGAAAT
GGATCCAGGTTCTCTATAAAAGCAAAAAAAAAAAAAAAAAAAAAAAGCTCTTAACTGCTGAACC
ATCTTTCCAGCCCCTTCTGGCCTTATCCTGTCCTCCGACTCTTGTGCAATCCAGACTTGTCTCT
CTCCCTGTACGTTGGATCTGGGAAGCCTAGCATTGCCCCAGTAGGCCTCAAGCAGCCTTGTAAC
CACAGCTCACTGGTCTCCCTGCACTTAGGCTCTTGTGGGTGTGTTGGTGACATACAGCAATCAG
GAGGGGAGATCTGAATGGCCACTGAAGGGGGCTCGGGATGGGGTTTGAATGGATTGAACTTTAG
CCAAATGGGTTTTCTCGGAGAATTTTGGCCACCATCCCCCAACTTGTGAGCAAAGTATCTCTGA
TTATTGCTCTGGATCTGGTGCAAGGATTCTTCTGGTTCTTCTCACCAAGCACCCAGGAGTCCTC
TCCTTCCCCAAACCCAGGGTGGGCACTGACCTCTCCAATCCTCAGGCCACCATTAAACAAAGAC
ACACAGGGTGCTTTTGCTAAAAGCATTGACTGTTCACTTGGCCCTCCAGGTGCCTAATGGGTTA
ATTAAAAACCAGAACAAAAGCTTGGTATGGTGCCTCCAGTTTGCTCCAATTTGCACCTGTTTCC
TTTGCACGGAGTCATTACTGTCTGGTGGATTCCAGGAACAACAGAGCCCCTGGATAAACATCTG
TGACAAGGGTCAAAACTACCCCTACTCCCGGCCACTGAACAAAGCTTGCAAAACCAATCCCAAG
ATAATGATCAACCAGACCATAGTTTGACCAAGGCTGATTAGTACGTGTTTCTTGTGTTTCTCGC
TCCAGCTTCTGTCCCTAGTCCTTGTGTCAGTTGGGAGCTCCTGTGAGGGCCTCTAATGCCAAGG
CTGACTGCATCATCCCCCTTCTCTTCCTGTGTATAGTTCTGCTGATTAAAGTTCCTTTCCTGTT
TTTCA

hide sequence

RefSeq Acc Id:

XR_005504505

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	56,654,257 - 56,664,467 (-)	NCBI

RefSeq Acc Id:

XR_005504506

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	5	56,654,257 - 56,664,467 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001102441	(Get FASTA)	NCBI Sequence Viewer
	XP_006238156	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL98671	(Get FASTA)	NCBI Sequence Viewer
	EDL98672	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_001102441 ⟸ NM_001108971

- UniProtKB:

D4AE63 (UniProtKB/TrEMBL), A6IIV2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPQNLQEKSQVYPRHRLGSHAGPKSLEVIPGATMYTFLPDNFSPAKPKPTKELRPLLCSVVLGL
LLVLAAVVAWCYYSASLRKAERLRAELLDLNRGGFSIRNQKGEQVFRLAFRSGALDLDSCSRDG
ALLGCSRTADGRPLHFFIQTVRPKDTVMCYRVRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRT
QHWPIRLDGQQEPQPFVTSDVYSSDAAFGGILERYWLSSRAAAIKVNDSVPFHLGWNSTERSMR
LQARYHHTSYKPPAGRTAAPELSYRVCVGSDVTSIHKYMVRRYFNKPSRVPASEAFRDPIWSTW
ALYGRSVDQNKVLQFAQQIRQHRFNSSHLEIDDMYTPAYGDFDFDESKFPNATDLFHRLRDAGF
RVTLWVHPFVNYNSSRFGEGVERELFVREPTGRLPALVRWWNGIGAVLDFTRPEAREWFQGHLR
RLRSRYNVASFKFDAGEVSYLPPDFSTYKPLSDPSVWSRRYTEMALPFFSLAEVRVGYQSQNIS
CFFRLVDRDSVWGYDLGLRSLIPAVLTVSMLGYPFILPDMIGGNAVPERTAGRPDGPGPERELY
VRWLEVAAFMPAMQFSIPPWQYDAEVVAIAHKFAALRASLVAPLLLELAGEVTDTGDPIVRPLW
WIAPGDETAHRIDSQFLIGDTLLVAPVLEPGKQERDVYLPAGKWRSYKGELFDKTPVLLTDYPV
DLDEVAYFTWAS

hide sequence

RefSeq Acc Id:	XP_006238156 ⟸ XM_006238094
- Peptide Label:	isoform X1
- UniProtKB:	D4AE63 (UniProtKB/TrEMBL), A6IIV2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPQNLQEKSQVYPRHRLGSHAGPKSLEVIPGATMYTFLPDNFSPAKPKPTKELRPLLCSVVLGL LLVLAAVVAWCYYSASLRKAERLRAELLDLNRGGFSIRNQKGEQVFRLAFRSGALDLDSCSRDG ALLGCSRTADGRPLHFFIQTVRPKDTVMCYRVRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRT QHWPIRLDGQQEPQPFVTSDVYSSDAAFGGILERYWLSSRAAAIKVNDSVPFHLGWNSTERSMR LQARYHHTSYKPPAGRTAAPELSYRVCVGSDVTSIHKYMVRRYFNKPSRVPASEAFRDPIWSTW ALYGRSVDQNKVLQFAQQIRQHRFNSSHLEIDDMYTPAYGDFDFDESKFPNATDLFHRLRDAGF RVTLWVHPFVNYNSSRFGEGVERELFVREPTGRLPALVRWWNGIGAVLDFTRPEAREWFQGHLR RLRSRYNVASFKFDAGEVSYLPPDFSTYKPLSDPSVWSRRYTEMALPFFSLAEVRVGYQSQNIS CFFRLVDRDSVWGYDLGLRSLIPAVLTVSMLGYPFILPDMIGGNAVPERTAGRPDGPGPERELY VRWLEVAAFMPAMQFSIPPWQYDAEVVAIAHKFAALRASLVAPLLLELAGEVTDTGDPIVRPLW WIAPGDETAHRIDSQFLIGDTLLVAPVLEPGKQERDVYLPAGKWRSYKGELFDKTPVLLTDYPV DLDEVAYFTWAS hide sequence

RefSeq Acc Id:

ENSRNOP00000033466 ⟸ ENSRNOT00000033235

RefSeq Acc Id:

ENSRNOP00000093769 ⟸ ENSRNOT00000098318

RefSeq Acc Id:

ENSRNOP00000076461 ⟸ ENSRNOT00000098360

RefSeq Acc Id:

ENSRNOP00000077557 ⟸ ENSRNOT00000097916

RefSeq Acc Id:

ENSRNOP00000087690 ⟸ ENSRNOT00000112042

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AE63-F1-model_v2	AlphaFold	D4AE63	1-716	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309821	AgrOrtholog
BioCyc Gene	G2FUF-41559	BioCyc
Ensembl Genes	ENSRNOG00000023208	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000033466	ENTREZGENE
	ENSRNOP00000033466.3	UniProtKB/TrEMBL
	ENSRNOP00000076461	ENTREZGENE
	ENSRNOP00000076461.1	UniProtKB/TrEMBL
	ENSRNOP00000077557.1	UniProtKB/TrEMBL
	ENSRNOP00000087690.1	UniProtKB/TrEMBL
	ENSRNOP00000093769.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000033235	ENTREZGENE
	ENSRNOT00000033235.6	UniProtKB/TrEMBL
	ENSRNOT00000097916.1	UniProtKB/TrEMBL
	ENSRNOT00000098318.1	UniProtKB/TrEMBL
	ENSRNOT00000098360	ENTREZGENE
	ENSRNOT00000098360.1	UniProtKB/TrEMBL
	ENSRNOT00000112042.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.1180	UniProtKB/TrEMBL
	Glycosidases	UniProtKB/TrEMBL
InterPro	Glyco_hydro_31	UniProtKB/TrEMBL
	Glyco_hydro_b	UniProtKB/TrEMBL
	Glyco_hydro_catalytic_core	UniProtKB/TrEMBL
KEGG Report	rno:366360	UniProtKB/TrEMBL
NCBI Gene	366360	ENTREZGENE
PANTHER	GLYCOSIDASE FAMILY 31	UniProtKB/TrEMBL
	MYOGENESIS-REGULATING GLYCOSIDASE	UniProtKB/TrEMBL
Pfam	Glyco_hydro_31	UniProtKB/TrEMBL
PhenoGen	Myorg	PhenoGen
Superfamily-SCOP	Glyco_hydro_cat	UniProtKB/TrEMBL
	Glycosyl hydrolase domain	UniProtKB/TrEMBL
UniProt	A6IIV2	ENTREZGENE, UniProtKB/TrEMBL
	D4AE63	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-08-09	Myorg	myogenesis regulating glycosidase	RGD1309821	similar to KIAA1161 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1309821	similar to KIAA1161 protein	RGD1309821_predicted	similar to KIAA1161 protein (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1309821_predicted	similar to KIAA1161 protein (predicted)	LOC366360_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC366360_predicted	similar to KIAA1161 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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