Gene: Hoxd12 (homeo box D12) Rattus norvegicus
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Symbol: Hoxd12
Name: homeo box D12
Description: ENCODES a protein that exhibits sequence-specific DNA binding (inferred); INVOLVED IN embryonic digit morphogenesis (ortholog); pattern specification process (ortholog); skeletal system development (ortholog); ASSOCIATED WITH clubfoot (ortholog); Congenital Limb Deformities (ortholog); melanoma (ortholog); FOUND IN transcription factor complex (ortholog); INTERACTS WITH bisphenol A; vinclozolin; 2,3,7,8-tetrachlorodibenzodioxine (ortholog)
AGR Description: Predicted to have sequence-specific DNA binding activity; predicted to be involved in embryonic digit morphogenesis, pattern specification process, and skeletal system development; predicted to localize to the transcription factor complex; orthologous to human HOXD12 (homeobox D12).
Merged Description: Predicted to have sequence-specific DNA binding activity; predicted to be involved in embryonic digit morphogenesis, pattern specification process, and skeletal system development; predicted to localize to the transcription factor complex; orthologous to human HOXD12 (homeobox D12); INTERACTS WITH bisphenol A; vinclozolin; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: homeobox protein Hox-D12; LOC366082
Orthologs:
Homo sapiens (human) : HOXD12 (homeobox D12)  HGNC  Alliance
Mus musculus (house mouse) : Hoxd12 (homeobox D12)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxd12 (homeobox D12)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXD12 (homeobox D12)
Canis lupus familiaris (dog) : HOXD12 (homeobox D12)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxd12 (homeobox D12)
Sus scrofa (pig) : HOXD12 (homeobox D12)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0361,597,382 - 61,598,503 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0368,063,896 - 68,065,017 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4357,290,344 - 57,291,465 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1357,186,790 - 57,187,755 (+)NCBI
Celera359,100,045 - 59,101,166 (+)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Hoxd12
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309797
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.