Gene: Traip (TRAF-interacting protein) Rattus norvegicus
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Symbol: Traip
Name: TRAF-interacting protein
Description: ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of interferon-beta production (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); hepatocellular carcinoma (ortholog); microcephaly (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1H-pyrazole; 6-propyl-2-thiouracil
AGR Description: Predicted to have ubiquitin protein ligase activity; predicted to be involved in several processes, including negative regulation of NF-kappaB transcription factor activity, negative regulation of interferon-beta production, and negative regulation of tumor necrosis factor-mediated signaling pathway; orthologous to human TRAIP (TRAF interacting protein).
Merged Description: Predicted to have ubiquitin protein ligase activity; predicted to be involved in several processes, including negative regulation of NF-kappaB transcription factor activity, negative regulation of interferon-beta production, and negative regulation of tumor necrosis factor-mediated signaling pathway; orthologous to human TRAIP (TRAF interacting protein); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 1H-pyrazole; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E3 ubiquitin-protein ligase TRAIP; LOC367167
Orthologs:
Homo sapiens (human) : TRAIP (TRAF interacting protein)  HGNC  Alliance
Mus musculus (house mouse) : Traip (TRAF-interacting protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Traip (TRAF interacting protein)
Pan paniscus (bonobo/pygmy chimpanzee) : TRAIP (TRAF interacting protein)
Canis lupus familiaris (dog) : TRAIP (TRAF interacting protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Traip (TRAF interacting protein)
Sus scrofa (pig) : TRAIP (TRAF interacting protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08116,730,170 - 116,750,528 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08116,085,076 - 116,104,852 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,220,855 - 113,240,631 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18113,240,295 - 113,260,085 (+)NCBI
Celera8107,946,305 - 107,966,080 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Traip
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309761
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.