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Gene: Trim16 (tripartite motif-containing 16) Rattus norvegicus
Symbol: Trim16
Name: tripartite motif-containing 16
RGD ID: 1309749
Description: Predicted to have DNA binding activity; NACHT domain binding activity; and interleukin-1 binding activity. Predicted to be involved in several processes, including histone acetylation; positive regulation of gene expression; and positive regulation of retinoic acid receptor signaling pathway. Predicted to localize to PML body; cytosol; and plasma membrane. Orthologous to human TRIM16 (tripartite motif containing 16); INTERACTS WITH acrylamide; aflatoxin B1; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC303214; MGC93671; tripartite motif protein 16; tripartite motif-containing protein 16
Homo sapiens (human) : TRIM16 (tripartite motif containing 16)  HGNC  Alliance
Mus musculus (house mouse) : Trim16 (tripartite motif-containing 16)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Trim16 (tripartite motif containing 16)
Pan paniscus (bonobo/pygmy chimpanzee) : TRIM16 (tripartite motif containing 16)
Canis lupus familiaris (dog) : TRIM16 (tripartite motif containing 16)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Trim16 (tripartite motif containing 16)
Sus scrofa (pig) : TRIM16 (tripartite motif containing 16)
Chlorocebus sabaeus (African green monkey) : TRIM16 (tripartite motif containing 16)
Heterocephalus glaber (naked mole-rat) : Trim16 (tripartite motif containing 16)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01049,231,660 - 49,254,653 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1049,231,730 - 49,254,621 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01049,011,305 - 49,033,997 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41048,987,004 - 49,009,696 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11049,000,664 - 49,021,215 (+)NCBI
Celera1046,731,462 - 46,754,204 (+)NCBICelera
Cytogenetic Map10q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
More on Trim16
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309749
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.