Iftap (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 108,242,105 - 108,361,607 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 87,812,068 - 87,906,517 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 87,817,408 - 87,906,547 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 91,302,986 - 91,397,385 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 99,902,007 - 99,996,404 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 97,734,261 - 97,828,658 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 91,086,186 - 91,195,981 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 91,086,186 - 91,195,981 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 97,747,219 - 97,855,462 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 86,659,453 - 86,769,728 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 86,555,862 - 86,570,765 (-) | NCBI | | | | | Celera | 3 | 86,918,911 - 87,012,704 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q31 | NCBI | | | | |
|
IFTAP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 36,594,502 - 36,659,272 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 36,594,369 - 36,675,695 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 36,616,052 - 36,680,822 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 36,572,669 - 36,637,393 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 36,768,524 - 36,833,247 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p12 | NCBI | | | | | HuRef | 11 | 36,318,827 - 36,383,623 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 36,614,729 - 36,679,528 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 36,737,675 - 36,802,458 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Iftap (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 101,391,124 - 101,459,376 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 101,391,126 - 101,479,877 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 101,560,779 - 101,629,031 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 101,560,781 - 101,649,532 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 101,400,938 - 101,469,143 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 101,361,620 - 101,429,825 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 102,785,023 - 102,853,977 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E2 | NCBI | | | | | cM Map | 2 | 53.83 | NCBI | | | | |
|
Iftap (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955422 | 9,804,075 - 9,851,434 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 9,804,012 - 9,867,580 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
IFTAP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 38,808,671 - 38,871,686 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 38,813,337 - 38,876,353 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 36,560,918 - 36,623,870 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 36,433,550 - 36,496,487 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 36,433,630 - 36,496,483 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
IFTAP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 18 | 31,553,965 - 31,618,147 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 31,556,023 - 31,618,123 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 31,161,267 - 31,225,435 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 32,164,548 - 32,228,462 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 32,164,557 - 32,228,377 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 18 | 31,734,611 - 31,798,476 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 18 | 31,318,922 - 31,382,825 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 31,956,075 - 32,020,030 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Iftap (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 28,615,241 - 28,680,414 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936533 | 1,747,525 - 1,805,194 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936533 | 1,746,762 - 1,805,191 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
IFTAP (Sus scrofa - pig) |
|
IFTAP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 28,356,363 - 28,649,661 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 28,586,378 - 28,646,330 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 125,721,128 - 125,790,037 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Iftap (Heterocephalus glaber - naked mole-rat) |
|