Mapk8ip2 (mitogen-activated protein kinase 8 interacting protein 2) - Rat Genome Database

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Gene: Mapk8ip2 (mitogen-activated protein kinase 8 interacting protein 2) Rattus norvegicus
Analyze
Symbol: Mapk8ip2
Name: mitogen-activated protein kinase 8 interacting protein 2
RGD ID: 1309727
Description: Predicted to enable several functions, including MAP-kinase scaffold activity; kinesin binding activity; and protein kinase activator activity. Involved in positive regulation of stress-activated MAPK cascade. Part of protein-containing complex. Orthologous to human MAPK8IP2 (mitogen-activated protein kinase 8 interacting protein 2); PARTICIPATES IN p38 MAPK signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; mitogen activated protein kinase signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; Tesaglitazar.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: C-Jun-amino-terminal kinase-interacting protein 2; IB-2; islet-brain-2; JIP-2; JNK MAP kinase scaffold protein 2; JNK-interacting protein 2; LOC315220
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27120,526,732 - 120,536,982 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl7120,526,732 - 120,536,982 (+)Ensembl
Rnor_6.07130,430,588 - 130,440,838 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7130,431,213 - 130,440,703 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07130,115,981 - 130,125,659 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47127,773,156 - 127,780,772 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17127,805,813 - 127,814,278 (+)NCBI
Celera7116,999,347 - 117,009,586 (+)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Interaction of Rac exchange factors Tiam1 and Ras-GRF1 with a scaffold for the p38 mitogen-activated protein kinase cascade. Buchsbaum RJ, etal., Mol Cell Biol. 2002 Jun;22(12):4073-85.
2. p38 MAP-kinases pathway regulation, function and role in human diseases. Cuenda A and Rousseau S, Biochim Biophys Acta. 2007 Aug;1773(8):1358-75. Epub 2007 Mar 24.
3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Sh3rf2/POSHER protein promotes cell survival by ring-mediated proteasomal degradation of the c-Jun N-terminal kinase scaffold POSH (Plenty of SH3s) protein. Wilhelm M, etal., J Biol Chem. 2012 Jan 13;287(3):2247-56. doi: 10.1074/jbc.M111.269431. Epub 2011 Nov 28.
10. Regulatory mechanisms of mitogen-activated kinase signaling. Zhang Y and Dong C, Cell Mol Life Sci. 2007 Nov;64(21):2771-89.
Additional References at PubMed
PMID:10490659   PMID:10756100   PMID:10827199   PMID:11238452   PMID:12244047   PMID:12477932   PMID:16018997   PMID:16301330   PMID:21048139  


Genomics

Comparative Map Data
Mapk8ip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27120,526,732 - 120,536,982 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl7120,526,732 - 120,536,982 (+)Ensembl
Rnor_6.07130,430,588 - 130,440,838 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7130,431,213 - 130,440,703 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07130,115,981 - 130,125,659 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47127,773,156 - 127,780,772 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17127,805,813 - 127,814,278 (+)NCBI
Celera7116,999,347 - 117,009,586 (+)NCBICelera
Cytogenetic Map7q34NCBI
MAPK8IP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382250,600,793 - 50,613,978 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl2250,600,793 - 50,613,981 (+)EnsemblGRCh38hg38GRCh38
GRCh372251,039,222 - 51,052,406 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362249,385,997 - 49,396,845 (+)NCBINCBI36hg18NCBI36
Build 342249,329,274 - 49,340,120NCBI
Celera2234,915,169 - 34,926,024 (+)NCBI
Cytogenetic Map22q13.33NCBI
HuRef2233,930,149 - 33,940,671 (+)NCBIHuRef
CHM1_12250,997,869 - 51,008,740 (+)NCBICHM1_1
T2T-CHM13v2.02251,111,308 - 51,124,536 (+)NCBI
Mapk8ip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391589,338,114 - 89,346,650 (+)NCBIGRCm39mm39
GRCm39 Ensembl1589,338,116 - 89,348,671 (+)Ensembl
GRCm381589,453,911 - 89,462,447 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1589,453,913 - 89,464,468 (+)EnsemblGRCm38mm10GRCm38
MGSCv371589,284,342 - 89,292,878 (+)NCBIGRCm37mm9NCBIm37
MGSCv361589,281,899 - 89,290,214 (+)NCBImm8
Celera1591,583,092 - 91,591,637 (+)NCBICelera
Cytogenetic Map15E3NCBI
Mapk8ip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541333,608,655 - 33,617,255 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541333,608,092 - 33,617,984 (+)NCBIChiLan1.0ChiLan1.0
MAPK8IP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12249,957,769 - 49,967,746 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2249,957,769 - 49,966,986 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02230,846,613 - 30,857,737 (+)NCBIMhudiblu_PPA_v0panPan3
MAPK8IP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11016,702,623 - 16,712,426 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1016,702,621 - 16,712,278 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1016,680,259 - 16,690,122 (-)NCBI
ROS_Cfam_1.01017,428,927 - 17,438,796 (-)NCBI
ROS_Cfam_1.0 Ensembl1017,428,925 - 17,438,588 (-)Ensembl
UMICH_Zoey_3.11017,153,336 - 17,163,199 (-)NCBI
UNSW_CanFamBas_1.01017,476,390 - 17,486,257 (-)NCBI
UU_Cfam_GSD_1.01017,608,511 - 17,618,380 (-)NCBI
Mapk8ip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945201,274 - 211,058 (-)NCBI
SpeTri2.0NW_004936629201,269 - 211,058 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAPK8IP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl5120,580 - 130,939 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.15120,575 - 131,060 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MAPK8IP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11933,079,548 - 33,090,221 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1933,079,626 - 33,091,514 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604592,245,858 - 92,256,615 (-)NCBIVero_WHO_p1.0
Mapk8ip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624752163,462 - 171,859 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_004624752162,724 - 171,984 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
D7Arb9  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,525,661 - 120,525,802 (+)MAPPERmRatBN7.2
Rnor_6.07130,429,518 - 130,429,658NCBIRnor6.0
Rnor_5.07130,114,339 - 130,114,479UniSTSRnor5.0
RGSC_v3.47127,771,434 - 127,771,575RGDRGSC3.4
RGSC_v3.47127,771,435 - 127,771,575UniSTSRGSC3.4
Celera7116,998,277 - 116,998,417UniSTS
Cytogenetic Map7q34UniSTS
AI847694  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,534,611 - 120,534,738 (+)MAPPERmRatBN7.2
Rnor_6.07130,438,468 - 130,438,594NCBIRnor6.0
Rnor_5.07130,123,289 - 130,123,415UniSTSRnor5.0
RGSC_v3.47127,780,385 - 127,780,511UniSTSRGSC3.4
Celera7117,007,216 - 117,007,342UniSTS
Cytogenetic Map7q34UniSTS
BF401761  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,535,557 - 120,535,650 (+)MAPPERmRatBN7.2
Rnor_6.07130,439,414 - 130,439,506NCBIRnor6.0
Rnor_5.07130,124,235 - 130,124,327UniSTSRnor5.0
RGSC_v3.47127,781,331 - 127,781,423UniSTSRGSC3.4
Celera7117,008,162 - 117,008,254UniSTS
RH 3.4 Map7957.3UniSTS
Cytogenetic Map7q34UniSTS
RH135212  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,536,731 - 120,536,932 (+)MAPPERmRatBN7.2
Rnor_6.07130,440,588 - 130,440,788NCBIRnor6.0
Rnor_5.07130,125,409 - 130,125,609UniSTSRnor5.0
RGSC_v3.47127,782,505 - 127,782,705UniSTSRGSC3.4
Celera7117,009,336 - 117,009,536UniSTS
RH 3.4 Map7958.3UniSTS
Cytogenetic Map7q34UniSTS
D4S2983  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27120,527,519 - 120,529,059 (+)MAPPERmRatBN7.2
Rnor_6.07130,431,376 - 130,432,915NCBIRnor6.0
Rnor_5.07130,116,197 - 130,117,736UniSTSRnor5.0
RGSC_v3.47127,773,293 - 127,774,832UniSTSRGSC3.4
Celera7117,000,135 - 117,001,674UniSTS
Cytogenetic Map7q34UniSTS
D7Arb9  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7q34UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7112308254133492884Rat
1357339Stl14Serum triglyceride level QTL 143.450.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7112729683133492707Rat
1582240Sffal1Serum free fatty acids level QTL 13.40.0021blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)7116677010124049952Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)7116677189127103496Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7119513385135012528Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:353
Count of miRNA genes:207
Interacting mature miRNAs:245
Transcripts:ENSRNOT00000055792
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 72 5
Low 2 12 2 2 2 2 16 2
Below cutoff 1 22 10 7 4 7 5 5 20 19 9 5

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000055792   ⟹   ENSRNOP00000052648
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7120,526,732 - 120,536,982 (+)Ensembl
Rnor_6.0 Ensembl7130,431,213 - 130,440,703 (+)Ensembl
RefSeq Acc Id: NM_001100720   ⟹   NP_001094190
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.27120,526,732 - 120,536,982 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001094190 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI05885 (Get FASTA)   NCBI Sequence Viewer  
  EDL76573 (Get FASTA)   NCBI Sequence Viewer  
  G3V9M2 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: ENSRNOP00000052648   ⟸   ENSRNOT00000055792
RefSeq Acc Id: NP_001094190   ⟸   NM_001100720
- UniProtKB: Q3B8P9 (UniProtKB/Swiss-Prot)
Protein Domains
PID   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-G3V9M2-F1-model_v2 AlphaFold G3V9M2 1-835 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695591
Promoter ID:EPDNEW_R6114
Type:single initiation site
Name:Mapk8ip2_1
Description:mitogen-activated protein kinase 8 interacting protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07130,431,118 - 130,431,178EPDNEW

Strain Variation

Strain Sequence Variants (mRatBN7.2)
ACI/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
ACI/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN-Lx/CubMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/NHsdMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BN/SsN (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BUF/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH2/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
BXH3/CubMcwi (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
DA/OlaHsd (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/DuCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/N (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/NCrl (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
F344/Stm (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FHH/EurMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE16/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
FXLE18/Stm (2020)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
GK/FarMcwi (2019)
Visual CSV TAB Printer
Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB10/IpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB2/IpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB20/IpcvMcwi (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB31/IpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
HXB4/IpcvMcwi (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LE/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEW/Crl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF10A/StmMcwi (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF11/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1A/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF1C/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF2B/Stm (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF3/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LEXF4/Stm (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LH/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LL/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
LN/MavRrrcAek (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Kwitek
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
M520/NRrrcMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MR/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
MWF/Hsd (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
PVG/Seac (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Japan
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHR/OlalpcvMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SHRSP/A3NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SR/JrHsd (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Envigo
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
SS/JrHsdMcwi (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: MCW
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WAG/RijCrl (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WKY/NCrl (2019)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: Charles River
Description: Dr. Mindy Dwinell - Hybrid rat diversity program
WN/N (2020)
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Platform: GSPMC-Illumina-NovaSeq6000
Secondary Analysis: BWA_mem_v.0.7.17,_GATK_v.4.1.3.0
Breeder: NIH
Description: Dr. Mindy Dwinell - Hybrid rat diversity program

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309727 AgrOrtholog
BioCyc Gene G2FUF-32433 BioCyc
Ensembl Genes ENSRNOG00000032828 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSRNOP00000052648 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000055792 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.30.29.30 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7311921 IMAGE-MGC_LOAD
InterPro JIP2_SH3 UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  PTB/PI_dom UniProtKB/Swiss-Prot
  SH3_domain UniProtKB/Swiss-Prot
MGC_CLONE MGC:124965 IMAGE-MGC_LOAD
NCBI Gene 315220 ENTREZGENE
Pfam PID UniProtKB/Swiss-Prot
  SH3_9 UniProtKB/Swiss-Prot
PhenoGen Mapk8ip2 PhenoGen
PROSITE PID UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
SMART PTB UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
UniProt G3V9M2 ENTREZGENE, UniProtKB/Swiss-Prot
  Q3B8P9 ENTREZGENE
UniProt Secondary Q3B8P9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Mapk8ip2  mitogen-activated protein kinase 8 interacting protein 2  Mapk8ip2_predicted  mitogen-activated protein kinase 8 interacting protein 2 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Mapk8ip2_predicted  mitogen-activated protein kinase 8 interacting protein 2 (predicted)      Symbol and Name status set to approved 70820 APPROVED