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Gene: Tfeb (transcription factor EB) Rattus norvegicus
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Symbol: Tfeb
Name: transcription factor EB
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II proximal promoter sequence-specific DNA binding activity; and protein heterodimerization activity. Predicted to be involved in several processes, including defense response to Gram-negative bacterium; positive regulation of cellular metabolic process; and regulation of defense response to bacterium, incompatible interaction. Predicted to localize to the cytoplasm; nucleoplasm; and transcription factor complex. Orthologous to human TFEB (transcription factor EB); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; ethanol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC316214; MGC116240; Tcfeb
Orthologs:
Homo sapiens (human) : TFEB (transcription factor EB)  HGNC  Alliance
Mus musculus (house mouse) : Tfeb (transcription factor EB)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tfeb (transcription factor EB)
Pan paniscus (bonobo/pygmy chimpanzee) : TFEB (transcription factor EB)
Canis lupus familiaris (dog) : TFEB (transcription factor EB)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tfeb (transcription factor EB)
Sus scrofa (pig) : TFEB (transcription factor EB)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0915,208,141 - 15,264,101 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0914,132,621 - 14,188,412 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.498,665,061 - 8,671,743 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.198,664,602 - 8,671,285 (-)NCBI
Celera910,951,098 - 10,957,780 (-)NCBICelera
Cytogenetic Map9q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Tfeb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309583
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.