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Gene: RGD1309540 (similar to hypothetical protein MGC40841; similar to hypothetical protein MGC4707) Rattus norvegicus
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Symbol: RGD1309540
Name: similar to hypothetical protein MGC40841; similar to hypothetical protein MGC4707
Description: Orthologous to human C11orf49 (chromosome 11 open reading frame 49); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; bisphenol A.
Type: protein-coding
RefSeq Status: PREDICTED
Also known as: hypothetical protein LOC295930; LOC102546523; LOC295930; similar to hypothetical protein MGC40841; similar to hypothetical protein MGC4707; uncharacterized LOC102546523; UPF0705 protein C11orf49 homolog
Orthologs:
Homo sapiens (human) : C11orf49 (chromosome 11 open reading frame 49)  HGNC  Alliance
Mus musculus (house mouse) : 1110051M20Rik (RIKEN cDNA 1110051M20 gene)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : LOC102029188 (chromosome unknown open reading frame, human C11orf49)
Pan paniscus (bonobo/pygmy chimpanzee) : C11H11orf49 (chromosome 11 C11orf49 homolog)
Canis lupus familiaris (dog) : C18H11orf49 (chromosome 18 C11orf49 homolog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : CUNH11orf49 (chromosome unknown C11orf49 homolog)
Sus scrofa (pig) : C2H11orf49 (chromosome 2 C11orf49 homolog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0380,092,589 - 80,349,249 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0386,803,731 - 86,828,440 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4375,634,724 - 75,806,257 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1375,531,095 - 75,702,629 (-)NCBI
Celera376,456,474 - 76,621,187 (-)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on RGD1309540
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309540
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.