Rps6kl1 (ribosomal protein S6 kinase-like 1) - Rat Genome Database

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Gene: Rps6kl1 (ribosomal protein S6 kinase-like 1) Rattus norvegicus
Analyze
Symbol: Rps6kl1
Name: ribosomal protein S6 kinase-like 1
RGD ID: 1309493
Description: Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to be involved in phosphorylation. Orthologous to human RPS6KL1 (ribosomal protein S6 kinase like 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC299202
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86110,514,322 - 110,530,955 (-)NCBIGRCr8
mRatBN7.26104,783,227 - 104,799,895 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6104,783,258 - 104,799,869 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6104,952,622 - 104,969,108 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06105,251,784 - 105,268,269 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06104,621,151 - 104,637,638 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06108,961,253 - 108,977,970 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,961,994 - 108,976,489 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,579,146 - 116,595,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,181,633 - 109,186,400 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16109,186,180 - 109,200,623 (-)NCBI
Celera6102,606,703 - 102,623,201 (-)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548  


Genomics

Comparative Map Data
Rps6kl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86110,514,322 - 110,530,955 (-)NCBIGRCr8
mRatBN7.26104,783,227 - 104,799,895 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6104,783,258 - 104,799,869 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6104,952,622 - 104,969,108 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06105,251,784 - 105,268,269 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06104,621,151 - 104,637,638 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06108,961,253 - 108,977,970 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,961,994 - 108,976,489 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,579,146 - 116,595,729 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,181,633 - 109,186,400 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16109,186,180 - 109,200,623 (-)NCBI
Celera6102,606,703 - 102,623,201 (-)NCBICelera
Cytogenetic Map6q31NCBI
RPS6KL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381474,903,951 - 74,923,260 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1474,903,951 - 74,923,302 (-)EnsemblGRCh38hg38GRCh38
GRCh371475,370,654 - 75,389,963 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361474,442,099 - 74,458,898 (-)NCBINCBI36Build 36hg18NCBI36
Build 341474,442,099 - 74,458,630NCBI
Celera1455,410,717 - 55,427,516 (-)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1455,538,659 - 55,557,147 (-)NCBIHuRef
CHM1_11475,309,827 - 75,328,322 (-)NCBICHM1_1
T2T-CHM13v2.01469,113,051 - 69,132,361 (-)NCBIT2T-CHM13v2.0
Rps6kl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,182,023 - 85,198,052 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,182,023 - 85,198,038 (-)EnsemblGRCm39 Ensembl
GRCm381285,135,249 - 85,151,277 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,135,249 - 85,151,264 (-)EnsemblGRCm38mm10GRCm38
MGSCv371286,476,546 - 86,492,214 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361286,024,733 - 86,040,321 (-)NCBIMGSCv36mm8
Celera1286,592,737 - 86,608,420 (-)NCBICelera
Cytogenetic Map12D1NCBI
cM Map1239.57NCBI
Rps6kl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955523645,444 - 658,535 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955523645,444 - 659,004 (+)NCBIChiLan1.0ChiLan1.0
RPS6KL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21575,988,439 - 76,006,098 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11475,204,947 - 75,222,603 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01455,456,079 - 55,475,438 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11474,301,446 - 74,319,774 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1474,301,446 - 74,319,774 (-)Ensemblpanpan1.1panPan2
RPS6KL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1848,026,233 - 48,041,758 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl848,022,712 - 48,042,101 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha847,706,576 - 47,738,264 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0848,250,013 - 48,281,740 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl848,253,860 - 48,269,433 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1847,920,919 - 47,952,568 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0847,942,228 - 47,973,876 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0848,340,507 - 48,372,501 (-)NCBIUU_Cfam_GSD_1.0
Rps6kl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864027,990,620 - 28,008,209 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364884,062,726 - 4,078,415 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364884,061,452 - 4,078,348 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPS6KL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl798,112,742 - 98,131,763 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1798,112,742 - 98,141,217 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27103,956,655 - 103,985,511 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPS6KL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12452,122,843 - 52,141,911 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2452,124,793 - 52,141,965 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605340,354,820 - 40,373,087 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rps6kl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473426,787,092 - 26,800,197 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473426,785,604 - 26,801,466 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Rps6kl1
36 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:87
Count of miRNA genes:67
Interacting mature miRNAs:75
Transcripts:ENSRNOT00000007350, ENSRNOT00000007438
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1331797Bp213Blood pressure QTL 2133.291arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)6104085867128713626Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 64 1 2
Low 3 42 43 27 19 27 8 11 10 35 34 9 8
Below cutoff 14 14 14 6

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001371378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001371379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006240316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006240317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006240318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063261752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005505489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE106822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000007350   ⟹   ENSRNOP00000007350
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6104,784,452 - 104,798,460 (-)Ensembl
Rnor_6.0 Ensembl6108,961,994 - 108,976,489 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000102445   ⟹   ENSRNOP00000090106
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6104,783,258 - 104,799,869 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115399   ⟹   ENSRNOP00000093654
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl6104,783,258 - 104,799,869 (-)Ensembl
RefSeq Acc Id: NM_001371378   ⟹   NP_001358307
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,322 - 110,530,929 (-)NCBI
mRatBN7.26104,783,258 - 104,799,869 (-)NCBI
RefSeq Acc Id: NM_001371379   ⟹   NP_001358308
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,322 - 110,530,929 (-)NCBI
mRatBN7.26104,783,258 - 104,799,869 (-)NCBI
RefSeq Acc Id: XM_006240318   ⟹   XP_006240380
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,329 - 110,530,955 (-)NCBI
mRatBN7.26104,783,227 - 104,799,895 (-)NCBI
Rnor_6.06108,961,253 - 108,977,970 (-)NCBI
Rnor_5.06116,579,146 - 116,595,729 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039112047   ⟹   XP_038967975
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,329 - 110,530,955 (-)NCBI
mRatBN7.26104,783,227 - 104,799,895 (-)NCBI
RefSeq Acc Id: XM_063261748   ⟹   XP_063117818
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,329 - 110,530,955 (-)NCBI
RefSeq Acc Id: XM_063261750   ⟹   XP_063117820
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,329 - 110,530,955 (-)NCBI
RefSeq Acc Id: XM_063261751   ⟹   XP_063117821
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,514,329 - 110,519,590 (-)NCBI
RefSeq Acc Id: XM_063261752   ⟹   XP_063117822
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,517,924 - 110,530,955 (-)NCBI
RefSeq Acc Id: XR_005505489
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86110,515,473 - 110,530,955 (-)NCBI
mRatBN7.26104,784,415 - 104,799,895 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_006240380   ⟸   XM_006240318
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSRNOP00000007350   ⟸   ENSRNOT00000007350
RefSeq Acc Id: XP_038967975   ⟸   XM_039112047
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AKT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001358308   ⟸   NM_001371379
- Peptide Label: 2
RefSeq Acc Id: NP_001358307   ⟸   NM_001371378
- Peptide Label: 1
- UniProtKB: A0A8I6AD01 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000093654   ⟸   ENSRNOT00000115399
RefSeq Acc Id: ENSRNOP00000090106   ⟸   ENSRNOT00000102445
RefSeq Acc Id: XP_063117820   ⟸   XM_063261750
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063117818   ⟸   XM_063261748
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063117821   ⟸   XM_063261751
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063117822   ⟸   XM_063261752
- Peptide Label: isoform X6
Protein Domains
Protein kinase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4AAT5-F1-model_v2 AlphaFold D4AAT5 1-544 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1309493 AgrOrtholog
BioCyc Gene G2FUF-36795 BioCyc
Ensembl Genes ENSRNOG00000005530 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000007350.9 UniProtKB/TrEMBL
  ENSRNOT00000102445 ENTREZGENE
  ENSRNOT00000102445.1 UniProtKB/TrEMBL
  ENSRNOT00000115399.1 UniProtKB/TrEMBL
Gene3D-CATH Phosphotransferase system, lactose/cellobiose-type IIA subunit UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom UniProtKB/TrEMBL
  MIT UniProtKB/TrEMBL
  MIT_dom_sf UniProtKB/TrEMBL
  Prot_kinase_cat_dom UniProtKB/TrEMBL
  STK_RPK118-like UniProtKB/TrEMBL
NCBI Gene 299202 ENTREZGENE
PANTHER PTHR15508:SF4 UniProtKB/TrEMBL
  RIBOSOMAL PROTEIN S6 KINASE UniProtKB/TrEMBL
Pfam MIT UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PhenoGen Rps6kl1 PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000005530 RatGTEx
SMART MIT UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP Kinase_like UniProtKB/TrEMBL
  SSF116846 UniProtKB/TrEMBL
UniProt A0A8I6AD01 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AKT7 ENTREZGENE, UniProtKB/TrEMBL
  D4AAT5_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Rps6kl1  ribosomal protein S6 kinase-like 1   Rps6kl1_predicted  ribosomal protein S6 kinase-like 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Rps6kl1_predicted  ribosomal protein S6 kinase-like 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED