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Gene: Cipc (CLOCK-interacting pacemaker) Rattus norvegicus
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Symbol: Cipc
Name: CLOCK-interacting pacemaker
Description: Predicted to be involved in negative regulation of circadian rhythm and negative regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Orthologous to human CIPC (CLOCK interacting pacemaker); INTERACTS WITH bisphenol A; furan; tetrachloromethane.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CLOCK-interacting protein, circadian; hypothetical protein LOC314330; LOC314330; RGD1309492; similar to mKIAA1737 protein; uncharacterized protein KIAA1737; uncharacterized protein LOC314330
Orthologs:
Homo sapiens (human) : CIPC (CLOCK interacting pacemaker)  HGNC  Alliance
Mus musculus (house mouse) : Cipc (CLOCK interacting protein, circadian)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cipc (CLOCK interacting pacemaker)
Pan paniscus (bonobo/pygmy chimpanzee) : CIPC (CLOCK interacting pacemaker)
Canis lupus familiaris (dog) : CIPC (CLOCK interacting pacemaker)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cipc (CLOCK interacting pacemaker)
Sus scrofa (pig) : CIPC (CLOCK interacting pacemaker)
Chlorocebus sabaeus (African green monkey) : CIPC (CLOCK interacting pacemaker)
Heterocephalus glaber (naked mole-rat) : Cipc (CLOCK interacting pacemaker)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.06110,968,014 - 110,990,912 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6110,968,061 - 110,990,912 (+)Ensembl
Rnor_5.06120,260,096 - 120,281,691 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46111,075,234 - 111,098,343 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16111,079,282 - 111,099,306 (+)NCBI
Celera6104,417,359 - 104,435,465 (+)NCBICelera
Cytogenetic Map6q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Cipc
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309492
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.