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Gene: Tmem131 (transmembrane protein 131) Rattus norvegicus

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Symbol:

Tmem131

Name:

transmembrane protein 131

RGD ID:

1309266

Description:

Predicted to enable collagen binding activity. Predicted to be involved in collagen biosynthetic process. Predicted to be active in membrane. Orthologous to human TMEM131 (transmembrane protein 131); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC102554557; LOC316335; RGD1309266; similar to RW1 protein; uncharacterized LOC102554557

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM131 (transmembrane protein 131)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Tmem131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tmem131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TMEM131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem131 (transmembrane protein 131)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Tmem131 (transmembrane protein 131)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tmem131 (transmembrane protein 131)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	TMEM131 (transmembrane protein 131)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	TMEM131 (transmembrane protein 131)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tmem131 (transmembrane protein 131)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tmem131 (transmembrane protein 131)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8370	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG8370	Alliance	DIOPT (InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tmem-131	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	tmem-131	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tmem131	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	46,512,328 - 46,658,624 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	46,512,328 - 46,658,481 (-)	Ensembl				GRCr8
mRatBN7.2	9	39,016,470 - 39,162,841 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	39,016,485 - 39,162,964 (-)	Ensembl				mRatBN7.2
Rnor_6.0	9	43,357,866 - 43,515,317 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	43,358,588 - 43,454,078 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	43,006,784 - 43,163,141 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	35,720,535 - 35,865,656 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	36,781,857 - 36,927,716 (-)	NCBI		Celera
RGSC_v3.1	9	35,721,975 - 35,867,853 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17alpha-ethynylestradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

calciol (ISO)

celecoxib (ISO)

chloropicrin (ISO)

cisplatin (ISO)

clobetasol (ISO)

cyclosporin A (ISO)

Dibutyl phosphate (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

FR900359 (ISO)

fulvestrant (ISO)

hydrogen peroxide (ISO)

inulin (ISO)

methapyrilene (EXP)

methimazole (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

oxaliplatin (EXP)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

propiconazole (EXP)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

temozolomide (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (ISO)

tungsten (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

collagen biosynthetic process (IEA,ISO)

Cellular Component

membrane (IBA,IEA)

Molecular Function

collagen binding (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation

Genomics

Comparative Map Data

Tmem131
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	46,512,328 - 46,658,624 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	46,512,328 - 46,658,481 (-)	Ensembl				GRCr8
mRatBN7.2	9	39,016,470 - 39,162,841 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	39,016,485 - 39,162,964 (-)	Ensembl				mRatBN7.2
Rnor_6.0	9	43,357,866 - 43,515,317 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	43,358,588 - 43,454,078 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	43,006,784 - 43,163,141 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	35,720,535 - 35,865,656 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	36,781,857 - 36,927,716 (-)	NCBI		Celera
RGSC_v3.1	9	35,721,975 - 35,867,853 (-)	NCBI
Cytogenetic Map	9	q21	NCBI

TMEM131
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	97,756,336 - 97,995,948 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	97,756,333 - 97,995,948 (-)	Ensembl			hg38	GRCh38
GRCh37	2	98,372,799 - 98,612,411 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	97,739,231 - 97,978,786 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	92,576,761 - 92,816,261 (-)	NCBI		Celera
Cytogenetic Map	2	q11.2	NCBI
HuRef	2	92,138,422 - 92,378,049 (-)	NCBI		HuRef
CHM1_1	2	98,377,138 - 98,616,671 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	98,214,553 - 98,454,161 (-)	NCBI		T2T-CHM13v2.0

Tmem131
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	36,831,270 - 36,978,714 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	36,831,272 - 36,982,747 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	36,792,189 - 36,939,614 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	36,792,191 - 36,943,666 (-)	Ensembl			mm10	GRCm38
MGSCv37	1	36,849,034 - 36,996,372 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	36,736,740 - 36,833,871 (-)	NCBI		MGSCv36	mm8
Celera	1	36,572,717 - 36,672,579 (-)	NCBI		Celera
Cytogenetic Map	1	B	NCBI
cM Map	1	15.42	NCBI

Tmem131
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955470	4,411,211 - 4,579,680 (-)	Ensembl
ChiLan1.0	NW_004955470	4,410,445 - 4,579,767 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM131
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	30,456,019 - 30,699,327 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	30,459,938 - 30,702,089 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	101,324,486 - 101,566,669 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	98,655,806 - 98,829,968 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	98,656,578 - 98,830,023 (-)	Ensembl			panPan2	panpan1.1

TMEM131
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	44,600,818 - 44,825,906 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	44,600,653 - 44,825,120 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	44,525,613 - 44,752,975 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	45,474,119 - 45,702,160 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	45,473,945 - 45,702,160 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	45,186,507 - 45,413,860 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	45,477,603 - 45,704,797 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	45,655,977 - 45,883,419 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tmem131
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	83,794,354 - 83,953,391 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936744	1,047,270 - 1,206,340 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936744	1,047,302 - 1,206,334 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM131
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	56,277,143 - 56,470,257 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	56,277,130 - 56,470,267 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	58,847,570 - 59,040,069 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM131
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	1,454,466 - 1,699,469 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	1,454,420 - 1,699,656 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666041	168,936,263 - 169,182,134 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem131
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624749	2,914,411 - 3,105,829 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624749	2,914,468 - 3,106,022 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Tmem131
857 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	74
Count of miRNA genes:	65
Interacting mature miRNAs:	66
Transcripts:	ENSRNOT00000023550
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	32535505	77535505	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	23754024	61381613	Rat
631680	Cm11	Cardiac mass QTL 11	3.1	0.00089	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	9	20430519	65430519	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	25268044	79271759	Rat
724544	Uae9	Urinary albumin excretion QTL 9	4.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	9	25268044	114175309	Rat
1354650	Despr5	Despair related QTL 5	4.01	0.0017	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	9	1254084	46254084	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	40594091	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	23754024	58157242	Rat
631643	Bp120	Blood pressure QTL 120	3	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	22071200	67071200	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	25661188	100929786	Rat
9589133	Insul26	Insulin level QTL 26	17.96	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	9	8952560	53952560	Rat
631211	Bw4	Body weight QTL4	5.31		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	9	5109826	50109826	Rat
2303559	Gluco54	Glucose level QTL 54	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	1254084	46254084	Rat
7411609	Foco16	Food consumption QTL 16	25.6	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	8952560	53952560	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	36962359	92058970	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	36962359	77814038	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	22071169	86369743	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	23754144	83851531	Rat
1641911	Alcrsp13	Alcohol response QTL 13			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	1	43718459	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	36962359	95410867	Rat
61425	Cia15	Collagen induced arthritis QTL 15	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	9	5109826	42921101	Rat
10054125	Srcrt7	Stress Responsive Cort QTL 7	3.33	0.0011	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	9	1	87073594	Rat
724543	Cm20	Cardiac mass QTL 20	3.9		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	9	16961398	40594091	Rat
1600365	Mcs20	Mammary carcinoma susceptibility QTL 20	3		mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	9	13533770	42791750	Rat
11353947	Bp392	Blood pressure QTL 392			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	7283252	52283252	Rat
1331757	Cdexp1	CD45RC expression in CD8 T cells QTL 1	4.3		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	9	1024537	67509080	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	32535505	77535505	Rat
1298088	Edpm11	Estrogen-dependent pituitary mass QTL 11	2.5		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	9	1	43718459	Rat
1598823	Memor16	Memory QTL 16	1.9		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	22133322	49968732	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	27468639	72468639	Rat

Markers in Region

D9Wox35

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,040,470 - 39,040,693 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	43,381,867 - 43,382,089	NCBI	Rnor6.0
Rnor_5.0	9	43,030,785 - 43,031,007	UniSTS	Rnor5.0
RGSC_v3.4	9	35,743,841 - 35,744,063	UniSTS	RGSC3.4
Celera	9	36,805,858 - 36,806,080	UniSTS
Cytogenetic Map	9	q21	UniSTS

RH142344

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,016,674 - 39,016,874 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	43,358,071 - 43,358,270	NCBI	Rnor6.0
Rnor_5.0	9	43,006,989 - 43,007,188	UniSTS	Rnor5.0
RGSC_v3.4	9	35,720,045 - 35,720,244	UniSTS	RGSC3.4
Celera	9	36,782,062 - 36,782,261	UniSTS
RH 3.4 Map	9	364.2	UniSTS
Cytogenetic Map	9	q21	UniSTS

RH138096

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,032,464 - 39,032,587 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	43,373,861 - 43,373,983	NCBI	Rnor6.0
Rnor_5.0	9	43,022,779 - 43,022,901	UniSTS	Rnor5.0
RGSC_v3.4	9	35,735,835 - 35,735,957	UniSTS	RGSC3.4
Celera	9	36,797,852 - 36,797,974	UniSTS
RH 3.4 Map	9	379.09	UniSTS
Cytogenetic Map	9	q21	UniSTS

RH138493

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,069,891 - 39,070,098 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	43,411,281 - 43,411,487	NCBI	Rnor6.0
Rnor_5.0	9	43,060,199 - 43,060,405	UniSTS	Rnor5.0
RGSC_v3.4	9	35,773,255 - 35,773,461	UniSTS	RGSC3.4
Celera	9	36,835,272 - 36,835,478	UniSTS
RH 3.4 Map	9	367.7	UniSTS
Cytogenetic Map	9	q21	UniSTS

D1Bwg0491e

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,016,547 - 39,016,706 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	43,357,944 - 43,358,102	NCBI	Rnor6.0
Rnor_5.0	9	43,006,862 - 43,007,020	UniSTS	Rnor5.0
RGSC_v3.4	9	35,719,918 - 35,720,076	UniSTS	RGSC3.4
Celera	9	36,781,935 - 36,782,093	UniSTS
Cytogenetic Map	9	q21	UniSTS

AU049660

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	39,051,250 - 39,051,383 (+)	MAPPER	mRatBN7.2
Rnor_6.0	9	43,392,643 - 43,392,775	NCBI	Rnor6.0
Rnor_5.0	9	43,041,561 - 43,041,693	UniSTS	Rnor5.0
RGSC_v3.4	9	35,754,617 - 35,754,749	UniSTS	RGSC3.4
Celera	9	36,816,634 - 36,816,766	UniSTS
Cytogenetic Map	9	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427652	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001056771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006226800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008758009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_349002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_356972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ223997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000023550 ⟹ ENSRNOP00000023550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,512,328 - 46,617,198 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,016,485 - 39,121,426 (-)	Ensembl
Rnor_6.0 Ensembl	9	43,358,588 - 43,454,078 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093761 ⟹ ENSRNOP00000090966

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,512,328 - 46,604,434 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,016,485 - 39,108,459 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112888 ⟹ ENSRNOP00000079056

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,512,328 - 46,658,481 (-)	Ensembl
mRatBN7.2 Ensembl	9	39,016,485 - 39,162,964 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000126093 ⟹ ENSRNOP00000101207

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,512,328 - 46,621,669 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148628 ⟹ ENSRNOP00000108721

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	46,512,328 - 46,621,115 (-)	Ensembl

RefSeq Acc Id:

NM_001427652 ⟹ NP_001414581

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,512,328 - 46,658,481 (-)	NCBI

RefSeq Acc Id:

XM_006244855 ⟹ XP_006244917

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,512,328 - 46,658,615 (-)	NCBI
mRatBN7.2	9	39,016,470 - 39,162,833 (-)	NCBI
Rnor_6.0	9	43,357,866 - 43,515,317 (-)	NCBI
Rnor_5.0	9	43,006,784 - 43,163,141 (-)	NCBI

Sequence:

show sequence

CTCGAGCTTGGCGGCCCCCGGCCGGCCAGGATGGGGAAGCGGGCGGGAGGAGGAGCAGCCGCCG
CCGCCGCCTCCGCGTCCTCCGGGGCCCGGCTGGAGCCCGCGGCCGGCCGCGGCGGGGGTCCTCG
GAGCGCGGCCGCCGGCCTCCTGGGAGCGCTGCACCTGGTGATGACCCTCGTGGTGGCCGCGGCG
CGGGCCGAGAAGGAAGCATTCATCCAGTCAGAGAGCATAATAGAAGTCCTGCGTTTTGACGATG
GAGGGCTGCTACAGACTGAGACAACACTTGGCCTCAGTTCATACCAGCAGAAAAGCATTTCTCT
GTACCGGGGTAATTGCAGGCCCATACGATTCGAACCACCCATGCTGGATTTCCATGAGCAGCCA
GTTGGAATGCCAAAAATGGAAAAAGTCTACTTACATAATCCTAGTTCTGAAGAAACTATTACTT
TAGTATCAATATCTGCTACCACATCACACTTCCATGCATCATTTTTTCAAAATAGGAAAATTCT
TCCAGGAGGAAACACATCATTTGATGTAGTTTTTCTTGCAAGAGTAGTAGGAAATGTAGAAAAT
ACTTTATTTATTAACACATCTAACCATGGGGTGTTCACTTACCAGGTATTTGGTGTTGGGGTTC
CAAATCCATACCGGTTAAGGCCATTTCTTGGGGCCAGAGTCCCCGTAAACAGCAGCTTTTCACC
TGTAATAAACATCCACAATCCTCACAGTGAGCCTTTACAGGTCGTAGAGATGTACTCGAGTGGA
GGCGACCTTCACCTAGAGCTCCCAACAGGTCAGCAAGGAGGCACCAGGAAACTGTGGGAGATCC
CTCCATATGAAACCAAGGGAGTGATGAGAGCCAGCTTTTCCTCCAGAGATGCAGACAATCACAC
AGCCTTCATAAGGATAAAGACGAATGCGTCGGACAGCACCGAGTTCATCATTCTCCCAGTCGAG
GTTGAAGTTACAACAGCTCCTGGAATCTATTCCTCTACTGAAATGTTAGATTTTGGAACACTTC
GAACACAAGATCTACCAAAGGTTTTAAATCTTCATTTACTAAATTCAGGAACAAAGGATGTACC
AATAACAAGTGTTCGACCAACACCACAAAATGATGCTATAACGGTGCATTTTAAACCTGTTACA
TTAAAAGCTTCTGAAAGTAAATATACCAAGGTTGCAAGCATTAGTTTTGATGCTTCAAGAGCAA
AAAAGCCATCTCAGTTTTCTGGGAAAATAACTGTTAAAGCAAAGGAAAAGAGTTATTCTAAACT
CGAAATCCCCTACCAAGCAGAAGTTTTAGATGGTTATTTGGGGTTTGATCATGCCGCCACGCTG
TTTCACATCCAGGACAGTCCTGCCGACCCAGTGGAGAGGCCAATTTACCTGACTAACACTTTCA
GTTTTGCGATCCTCATTCATGATGTGTTGTTACCAGAAGAAGCCAGAACGATGTTTCAGGTGCA
CAACTTCAGCAAGCCAGTTCTGATTCTTCCGAATGAGTCGGGATACATTTTCACCCTGTTTTTT
ATGCCATCCACGTCATCCATGCACATAGACAACAACATTTTACTTGTTACCAATGCCTCTAAGT
TTCATTTACCTGTGCGGGTATACACAGGCTTTTTAGATTACTTTGTATTGCCCCCCAAAATAGA
AGAACGCTTCATAGATTTTGGAGTACTGAGTGCTACAGAAGCAAGTAGTATTTTATTTGCAATT
ATAAACAGCAATCCAATTGAGCTGGCAATAAAAAGTTGGCATATCATAGGAGATGGCTTATCAA
TAGAACTTGTAGCTACAGAGAGAGGCAACAGAAGCACAGTGATCGCGAGCCTTCCTGAACTGGA
GAAGTCCTCTCTGCCAGACCAATCCCCGGTAACATTAGCTTCAGGACACTTTGCAGTGTTCAGA
GTCAAACTCACTGCCAAGAAGCTGGAAGGGGTCCACGATGGGGCCATCCAGATCACAACCGACT
ATGAGATCCTGACCATTCCTGTGAAAGCTGTGGTCGCCGTGGGCTCGCTGACGTGCTTCCCCAA
GCACATGGTTCTTCCCCCTTCCTTCCCTGGGAAAATAGTCCATCAGAGCTTAAATGTTATGAAT
TCCTTCTCACAGAAGGTGAAGATCCAGCAAATAAGGTCTTTGTCAGAAGACGTTCGATTCTACT
ACAGACGATTACGGGGTAATAGGGAAGACTTGGAGCCAGGGAAAAAGTCGAAGATTGCAAACAT
TTATTTTGATCCTGGGCTACAGTGTGGGGATCACTGCTATATTGGCTTGCCTTTCCTATCCAAA
TCTGAACCCAAAGTGCAACCCGGGGTGGCCATGCAGGAAGACTTGTGGGATGCCGACTGGGAGG
CCCATCAGAGTTTGTTCAAAGCTTGGATGGGGATAAAGGAGAACGCAGGACATAGGTTGAATGC
TATGTTCGAAGTAAATACAGATCTTCAAAAAAATATAATATCAAAAGTCAGTGCAGAGCTCTCC
TGGCCGTCTGTCCTTAGCTCGCCCCGGCTGGTGAGGTTTCCACTCACCAACACAAATTGCTCCT
CAGAAGAAGAGATTAGCGTAGAAAACCCTGCAGATGTCCCTGTCTACGTGCAGTTCATACCCCT
GGCTTTGTATTCCAACCCCTCCGTCTTTGCAGATAAGTTAGTGTCCAGGTTTAACTTGAGTAAG
GTGGCCAAGCTAGATTTGAGAACACTTGAATTCCAAGTCTACAGGAACAGTGCTCATCCACTGC
AAAGTCCAACAGGATTTACAGAGGGTCTCTCTCGGCATTTCATTTTAAACCTCATTTTAAAACC
TGGAGAAAAGAAATCTGTCACAGTAAAGTTCACTCCACTCCACAACAGAACTGTTTCTTCCCTG
ATCATAGTCAGAAACAACCTGACTGTGATGGATGCTGTCATGGTCCAGGGTCAGGGGACAACGG
AGAACCTGAGGGTGGCAGGCAAGCTTCCAGGTCCAGGAAGCTCCTTGCGCTTCAAAATCACAGA
AGCACTGTTAAAGGATTGCATAGACCGTTTGAAACTACGAGAACCAAATTTCACATTGAAAAGA
ACATTCAAAGTAGAGAATGCAGGACACCTCGAGATCCGTGTAGAAACCATTGAAATCAGTGGAT
ATGCGTGTGAGGGATATGGCTTTAAAGTGGTTAACTGTCAAGAGTTTGCACTGAGTGCCAACGC
CTCCAGAGACATAGTCATATTGTTTACTCCAGATTTCACAGCCTCCAGAGTTATTCGGGAACTG
AAGTTTGTGACAAGCAGCGGCTCCGAGTTTGTGTTTGTGTTGAATGCCTCTCTTCCGTACCACA
TGTTGGCCGCCTGTGCAGAAGCCCTCCCTAGACCAAACTGGGAACTGGCGCTATACATCATCAT
CTCAGGGGTCATGAGTGCGCTGTTTCTTCTGGTCATTGGAACGGCCTATTTGGAAGCTCAAGGA
ATTTGGGAGCCATTTCGAAGGCGACTCTCCTTTGAAGCATCAAACCCACCCTTTGATGTGGGAA
GGCCGTTTGATCTCAGGAGAATCGTTGGTATTTCATCCGAAGGAAACTTGAACACACTCGGCTG
CGAACACAGTCATGGTAGGGGTTTCTATAGTAACTCATCATCCCGACCTGGTACAGGCAGCCAC
AGGCAGTGTGGCACATCAGTCCACCCACACAGCAGCCACGGCAGCAAAAACTCAGCTGACGTGG
ACAACGTCAGAACCAGAAACAGCTCCAGTATGTCGAGCAGGACTTCTCCACAAGCAGCCACCTC
ACAGTCTACAAGCAAAACAAGCCCCCTAGTCTCAGAGGCAGCTGCAGCAACCCAGGGTCACACA
GCAAGCAGGAAGTCCAAAGGGGCAAAACAGGGCCAGCACAACAGCCAGCACCACAGCCACAGCC
CACTGGAGCAGCACTCCCAGCCTCCACCACCAGTGCCTCAGCACCAGGAGCCACCACCTGAAAG
GCTGTCCCCTGCCCCCCTCACACACCCTCCCCACCCCGAGCGAGCCAGCACCACACGGCACAGC
TCAGAGGACTCCGACATCACCAGCCTCATAGAAGCCATGGACAAAGACTTCGAGCACCATGACT
CCCCATCCCTAGACGTGTTTACAGAGCAGCCTCCGTCACCACTGTCAAAAAACAAAGGGAAAGG
AAAGTCTCTCCAGCAACGCAAGGCCAAGCCTCCCAAGAAGCAGGAGGAGAAGGAGAAGAGGGGA
AAGGGGAAGCCTCAGGAGGAGGAGCTGAAGGACACGCTGGCTGATGATGACAGCTCCTCCACCA
CCACAGAGACCTCCAACCCCGACACAGAGCCTCTCCTCAGGGAGGATACAGAAAAGCACAAAGG
GAGACCAGCCATGCCTGAAAAACAGGAAAGTGAACTGTCTCAAGGGAAGCCAAAGAGCAAAAAG
CTCTTAAATGCCAAGAAAGAAATCCCAACAGATGTGAAAGGCGGTTCCTTTGAACTACCATATA
CGCCCTCACTGGAAAATAAACAGCGTAGAAGTCTCTCCAAGATTCCTCTTCCAACTACACTAAC
AAGTGGATCCAAATCACGAAATCCCCAGAAAACAAAAGGTACAGATAAGTTAGTGGGAAGCAGG
CCCGCTGCCCTCTCGAAGCTCCTCCCCAACAGTCAAGAACTAAGCAGTACCAGCAGCTCAGAGG
GCGAGAAAGACTCTCCTCCACCAGAGTGGGATGCTGTGCCGGTTCACAAGCCCAGCAGCTCTAC
TGACAGTCTTTATAAACTGTCTCTGCAAACACTCAATGCAGACATTTTCTTAAAACAACGTCAG
ACCTCGCCAACACCGGCCTCTCCTCTGCCCACTGCTCCCTGCCCTTTCACATCCCGTGGCAGCT
ACAGCAGCGTTGTCAACAGCTCCGGCAGTGACACAAAAGCAAAGCAGCCAAACGGTAGCAAGAG
CAAGCTGACAAAGGCGGCCTCTCTCCCGGGAAAGAACGGCAACCCCACCTTTGCTGCTGTCGCC
GCAGGCTATGACAAGAGCCCAGGTGGGAATGGATTTGCTAAGATCTCGTCAAACAAATCAGAGT
TTTCCAGCAGCCTTGGCATTTCACACATTCCTGTGGACAGTGATGGCTCTGACAGCTCGGGTTT
GTGGAGTCCTGTCAGCAACCCCAGCAGCCCTGACTTCACCCCCCTCAATTCGTTCTCAGCCTTT
GGGAATTCCTTTAATCTAACGGGTGTTTTCAGCAAACTGTCGCGATCCTGCAGTCAGTCATCCC
AGAGGAGTTGGAATGAGCTCAGCAGCGGCCCCTCCTACCTCTGGGACGCTCCAGCAGCAGACCC
CAGCCCTTCCTGGCCAGTTCCAGCCAGTTCCAGCTCAACAACCCACACAGCCACCTCCATCCTG
GGCAACACCAGTGGCCTGTGGTCCACCACTCCATTCAGTAGCTCAATCTGGTCCAGCAACATCA
ACAGCAACCTTCCGTTCTCCACTCCAACAAACACGCTGTCAGGCATCGGCCTCATGGGCACGGA
AAACTCCACCCCTGCCCACGCTCCTGCCTCCAGCCCAGCGGATGACTTGGGACAGACCTACAAC
CCCTGGCGGATATGGAGTCCTACGATCGGGAGAAGAAGCTCTGACCCATGGTCTAATTCACACT
TCCCTCATGAAAATTAAAATTAAGCAAAAATCGAAGTGGGGGCCTCTCTAGATCATGATCTGCC
AGCTTCCCAGCCGTCTGTCCTCTGGAGGCCCTTATGCTCGCCCTCCTCCCCCTCGCGGGCAGGG
CAGCCTTGTCCACTCGCTTCTCTCACGTCTTTCTCGCAATTATGATACCCTGAGATTTGCTGTT
GTGCTTGTAGACAAAAGTCTGGACGCAGCCACAAACTACAACCTGTCATCTGAAATCTTGACTT
TCCAGTTCCCCACCGTCTCTTCCTGCCTTCTTTATCATAAGAACACAAATTTGGCATTGCAGTT
AAGGGAGAAATTTGAACTGATTGACAAGTCCTGGCATGTGACAATTTTACTAAATTTACCAAGT
TTGGTTTTTAATAATTTCACAATATTATGCGCCAAGATCTAATTTTAAAAATGTATGAGGACTT
TGTGCTGAAAATACAGAGTATTTTTTTAAAGTAAGGCTATCTTGGTTAAAAGCAGATTACAGAA
ATGTAAGCCAGCGTAAGAGCAGTGGCTGACGGTAGAGCGCCCGGTGGGAAGGAACCACACGCAG
CTTCTGTGCTGTGTGTTGAGGTGTGCACATTTGTACACCTGACTTATTTTAAAGCGAACTGAAA
TGCACATAGCCAAGTCTTGCATTACAAGATTGTGTATTTCTTAAAATACAACTTTGTGTTGTAC
TTTGAAATAAATGATGCTTTTTTCAAAAGCCTTAA

hide sequence

RefSeq Acc Id:

XM_006244858 ⟹ XP_006244920

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,512,328 - 46,604,616 (-)	NCBI
mRatBN7.2	9	39,016,470 - 39,108,825 (-)	NCBI
Rnor_6.0	9	43,357,866 - 43,451,940 (-)	NCBI
Rnor_5.0	9	43,006,784 - 43,163,141 (-)	NCBI

Sequence:

show sequence

TCTTACACACACACCCACACCCCCAAAAAGGATATTGGAATGTGGCTCTAGCACCATCACGGTG
GAACATGCACTTTTGTATATGTGTTTGGGGCAGGATAAATAAGACATTTAAATTAGGGACTTTA
AGAGTCTAGAATTGTACTCATTTATTATTTTTGAAGAGTCAGTTGTGGGCTGTAATTCCTGTAT
AGATGCATAAAATGTGATAAGAGGTTTGTACAGTGAATCAATGTCTATACCACCCAGCTTAAAT
GCTAAGAGCAGGTACCAGCCAACACCGGCAGAGGTAAGCACCCCTCAAGTTCTCTCAGTCAGCG
TTCTCAAAACTGACTCTTACGCTGCCATTCATGGCAATTTCCTTTCCTCTAGCGTTAGCAATCC
AAGCTCTACGCTGTAGATGCTGTAGCTTCACTTGTGGTTTCACGTCCACGTGATTTGTGCTGCT
TTTGGCTTCTCTTTCTCAGATTGTGTTAATAAAGTTTTCTGTGTGAATGAAAAACTTATTTCAG
TTGCCGCTTCCACAGGTATGGCTGGGCCCAATTCGAGGATCCTTTTTGTGGTTGTAGATACTTT
AGTTGCTTCTAGTTTTCAGCTATTAATTACGAGTAAAGCTTTCTCTTAGTAAATATGCATGTTT
CTCATAGAGTAAGCCGCAGCTAGTAGGTTGTCTTCAGCTGAGATTTTTTTCCTCACATTTTGTT
CTGCATGTGTGTTTGTGTGGGTGTGTGTGAAAGTCAGGACAACTCGTGGGAGTTTGTGCTGTCT
CTGCTCTGTATATAGTTCAGGCGGTCCTCCCTGTAGATGCCTTTACCTGCCGTGTCTTTGGTTT
AATAGACGGTGACAGTAGTTTTCCAGTTTACAATCCCATCATCAGGAATTCCTTGATTTACATT
TAAACATCTTGGCACAGCCCACTAGAAGCACTCCCCCTTCTCTGTTCTGTCCTGTCACTATTTT
TACTTGATGGGTTGTTCTTTTGACTTAGGTAATTGTGACTTCCAATAAACAGAAATCCTTTATT
CATGACGTTTAGCTTTGTTACATTTACTTTGTCTTATGTCTGACTGAAGGACCAGATTATGTGA
CTAGGAAGATAGCTGAGTTGGTAAAGTGCCTGCATGGCAGACATCAGAACCCAGGTTAGATCCC
CAGCACCCACCTGAGGAAGTTAACCATGGTGGCTGGAGAAGTAGAGACAGAAGGGCCCTGGGGC
TCACTGGCCGGCCAGCCTAGCCCATCAGTGATCTCCAAGTCCAGGTAAGGGACTATCTCAAAAA
CCCAAGTGAATGACTTCCTAGAAATAACACCCAGGGCTGGCCCCCAGCCCTAGCGTGCATCTGT
GAGCCCACACACATATGTACGTTCACATACATCTGTGCTCATCTACCACTTGCACACTATGAAT
GATGTTAAATTTAGAATTTCATTGGCTGCTCTCCTTAGGTACAGCTGCAGCTCCTAAAATTATA
ACTTTAGCGGAGGCAGGGGCAGAGCTTCCTTGTTGCCGTTCAGTTGTTTTCGTGTCCTTTGCCG
ACTGTCCTGCAGTACTTTGTTACCCACTCACTCTTCAGCAGCGTGCCTGTCTCCTGGTCGCTGC
TGCTCCGTGTGGGAGCTGGTTTTCTGGGCTCCTGAAACCTATTTGTCTTTGCAACTACTCTTTT
TAAGGTTTTGATTCTCATTCCTTCCTCTTAGATGTGGTTCTTGGTAACCACATCTTTGTTGCCC
TAAAGTCCTGTGCCTTCCATGTGCACTTTTAAACTCTGTGTACACTGTTGGGTTGTTTCTTAGG
ATTACGCTGGATCTGAAGATCAATTTGGAGAGAATTAGAACTCTTTGTGGGAAATTAAATCAGT
ATGTACTGTGCAGAATAGTAATAGCACCGTGACTAATATAGTGTGCAGAACATTGTACTAGTGC
TAAGGGGCAGATGACAGGAAGCTACCAGCACCTTCTTCCTTACTCCTGAGTCTTGGTGTGAGTC
ATTCCTGTAGGGCACTCAGTTACTATGGTGATGGATTATGTGCCCAGAAAGGCCATCTCTAGGC
CTCCTGTCAGTAGTCAGAGCTGAGCTCACAGCTCATAGCCAGTACCACTCTCCCCCCTGTGAAT
GAGCTTCATGGACAACCAACTAGCACATCTGAAACTTCCTACAGATGCAGCTTGAAATCACACT
TGACTGCAGCACAAAGACACGAACTGAGACAACACTTGGCCTCAGTTCATACCAGCAGAAAAGC
ATTTCTCTGTACCGGGGTAATTGCAGGCCCATACGATTCGAACCACCCATGCTGGATTTCCATG
AGCAGCCAGTTGGAATGCCAAAAATGGAAAAAGTCTACTTACATAATCCTAGTTCTGAAGAAAC
TATTACTTTAGTATCAATATCTGCTACCACATCACACTTCCATGCATCATTTTTTCAAAATAGG
AAAATTCTTCCAGGAGGAAACACATCATTTGATGTAGTTTTTCTTGCAAGAGTAGTAGGAAATG
TAGAAAATACTTTATTTATTAACACATCTAACCATGGGGTGTTCACTTACCAGGTATTTGGTGT
TGGGGTTCCAAATCCATACCGGTTAAGGCCATTTCTTGGGGCCAGAGTCCCCGTAAACAGCAGC
TTTTCACCTGTAATAAACATCCACAATCCTCACAGTGAGCCTTTACAGGTCGTAGAGATGTACT
CGAGTGGAGGCGACCTTCACCTAGAGCTCCCAACAGGTCAGCAAGGAGGCACCAGGAAACTGTG
GGAGATCCCTCCATATGAAACCAAGGGAGTGATGAGAGCCAGCTTTTCCTCCAGAGATGCAGAC
AATCACACAGCCTTCATAAGGATAAAGACGAATGCGTCGGACAGCACCGAGTTCATCATTCTCC
CAGTCGAGGTTGAAGTTACAACAGCTCCTGGAATCTATTCCTCTACTGAAATGTTAGATTTTGG
AACACTTCGAACACAAGATCTACCAAAGGTTTTAAATCTTCATTTACTAAATTCAGGAACAAAG
GATGTACCAATAACAAGTGTTCGACCAACACCACAAAATGATGCTATAACGGTGCATTTTAAAC
CTGTTACATTAAAAGCTTCTGAAAGTAAATATACCAAGGTTGCAAGCATTAGTTTTGATGCTTC
AAGAGCAAAAAAGCCATCTCAGTTTTCTGGGAAAATAACTGTTAAAGCAAAGGAAAAGAGTTAT
TCTAAACTCGAAATCCCCTACCAAGCAGAAGTTTTAGATGGTTATTTGGGGTTTGATCATGCCG
CCACGCTGTTTCACATCCAGGACAGTCCTGCCGACCCAGTGGAGAGGCCAATTTACCTGACTAA
CACTTTCAGTTTTGCGATCCTCATTCATGATGTGTTGTTACCAGAAGAAGCCAGAACGATGTTT
CAGGTGCACAACTTCAGCAAGCCAGTTCTGATTCTTCCGAATGAGTCGGGATACATTTTCACCC
TGTTTTTTATGCCATCCACGTCATCCATGCACATAGACAACAACATTTTACTTGTTACCAATGC
CTCTAAGTTTCATTTACCTGTGCGGGTATACACAGGCTTTTTAGATTACTTTGTATTGCCCCCC
AAAATAGAAGAACGCTTCATAGATTTTGGAGTACTGAGTGCTACAGAAGCAAGTAGTATTTTAT
TTGCAATTATAAACAGCAATCCAATTGAGCTGGCAATAAAAAGTTGGCATATCATAGGAGATGG
CTTATCAATAGAACTTGTAGCTACAGAGAGAGGCAACAGAAGCACAGTGATCGCGAGCCTTCCT
GAACTGGAGAAGTCCTCTCTGCCAGACCAATCCCCGGTAACATTAGCTTCAGGACACTTTGCAG
TGTTCAGAGTCAAACTCACTGCCAAGAAGCTGGAAGGGGTCCACGATGGGGCCATCCAGATCAC
AACCGACTATGAGATCCTGACCATTCCTGTGAAAGCTGTGGTCGCCGTGGGCTCGCTGACGTGC
TTCCCCAAGCACATGGTTCTTCCCCCTTCCTTCCCTGGGAAAATAGTCCATCAGAGCTTAAATG
TTATGAATTCCTTCTCACAGAAGGTGAAGATCCAGCAAATAAGGTCTTTGTCAGAAGACGTTCG
ATTCTACTACAGACGATTACGGGGTAATAGGGAAGACTTGGAGCCAGGGAAAAAGTCGAAGATT
GCAAACATTTATTTTGATCCTGGGCTACAGTGTGGGGATCACTGCTATATTGGCTTGCCTTTCC
TATCCAAATCTGAACCCAAAGTGCAACCCGGGGTGGCCATGCAGGAAGACTTGTGGGATGCCGA
CTGGGAGGCCCATCAGAGTTTGTTCAAAGCTTGGATGGGGATAAAGGAGAACGCAGGACATAGG
TTGAATGCTATGTTCGAAGTAAATACAGATCTTCAAAAAAATATAATATCAAAAGTCAGTGCAG
AGCTCTCCTGGCCGTCTGTCCTTAGCTCGCCCCGGCTGGTGAGGTTTCCACTCACCAACACAAA
TTGCTCCTCAGAAGAAGAGATTAGCGTAGAAAACCCTGCAGATGTCCCTGTCTACGTGCAGTTC
ATACCCCTGGCTTTGTATTCCAACCCCTCCGTCTTTGCAGATAAGTTAGTGTCCAGGTTTAACT
TGAGTAAGGTGGCCAAGCTAGATTTGAGAACACTTGAATTCCAAGTCTACAGGAACAGTGCTCA
TCCACTGCAAAGTCCAACAGGATTTACAGAGGGTCTCTCTCGGCATTTCATTTTAAACCTCATT
TTAAAACCTGGAGAAAAGAAATCTGTCACAGTAAAGTTCACTCCACTCCACAACAGAACTGTTT
CTTCCCTGATCATAGTCAGAAACAACCTGACTGTGATGGATGCTGTCATGGTCCAGGGTCAGGG
GACAACGGAGAACCTGAGGGTGGCAGGCAAGCTTCCAGGTCCAGGAAGCTCCTTGCGCTTCAAA
ATCACAGAAGCACTGTTAAAGGATTGCATAGACCGTTTGAAACTACGAGAACCAAATTTCACAT
TGAAAAGAACATTCAAAGTAGAGAATGCAGGACACCTCGAGATCCGTGTAGAAACCATTGAAAT
CAGTGGATATGCGTGTGAGGGATATGGCTTTAAAGTGGTTAACTGTCAAGAGTTTGCACTGAGT
GCCAACGCCTCCAGAGACATAGTCATATTGTTTACTCCAGATTTCACAGCCTCCAGAGTTATTC
GGGAACTGAAGTTTGTGACAAGCAGCGGCTCCGAGTTTGTGTTTGTGTTGAATGCCTCTCTTCC
GTACCACATGTTGGCCGCCTGTGCAGAAGCCCTCCCTAGACCAAACTGGGAACTGGCGCTATAC
ATCATCATCTCAGGGGTCATGAGTGCGCTGTTTCTTCTGGTCATTGGAACGGCCTATTTGGAAG
CTCAAGGAATTTGGGAGCCATTTCGAAGGCGACTCTCCTTTGAAGCATCAAACCCACCCTTTGA
TGTGGGAAGGCCGTTTGATCTCAGGAGAATCGTTGGTATTTCATCCGAAGGAAACTTGAACACA
CTCGGCTGCGAACACAGTCATGGTAGGGGTTTCTATAGTAACTCATCATCCCGACCTGGTACAG
GCAGCCACAGGCAGTGTGGCACATCAGTCCACCCACACAGCAGCCACGGCAGCAAAAACTCAGC
TGACGTGGACAACGTCAGAACCAGAAACAGCTCCAGTATGTCGAGCAGGACTTCTCCACAAGCA
GCCACCTCACAGTCTACAAGCAAAACAAGCCCCCTAGTCTCAGAGGCAGCTGCAGCAACCCAGG
GTCACACAGCAAGCAGGAAGTCCAAAGGGGCAAAACAGGGCCAGCACAACAGCCAGCACCACAG
CCACAGCCCACTGGAGCAGCACTCCCAGCCTCCACCACCAGTGCCTCAGCACCAGGAGCCACCA
CCTGAAAGGCTGTCCCCTGCCCCCCTCACACACCCTCCCCACCCCGAGCGAGCCAGCACCACAC
GGCACAGCTCAGAGGACTCCGACATCACCAGCCTCATAGAAGCCATGGACAAAGACTTCGAGCA
CCATGACTCCCCATCCCTAGACGTGTTTACAGAGCAGCCTCCGTCACCACTGTCAAAAAACAAA
GGGAAAGGAAAGTCTCTCCAGCAACGCAAGGCCAAGCCTCCCAAGAAGCAGGAGGAGAAGGAGA
AGAGGGGAAAGGGGAAGCCTCAGGAGGAGGAGCTGAAGGACACGCTGGCTGATGATGACAGCTC
CTCCACCACCACAGAGACCTCCAACCCCGACACAGAGCCTCTCCTCAGGGAGGATACAGAAAAG
CACAAAGGGAGACCAGCCATGCCTGAAAAACAGGAAAGTGAACTGTCTCAAGGGAAGCCAAAGA
GCAAAAAGCTCTTAAATGCCAAGAAAGAAATCCCAACAGATGTGAAAGGCGGTTCCTTTGAACT
ACCATATACGCCCTCACTGGAAAATAAACAGCGTAGAAGTCTCTCCAAGATTCCTCTTCCAACT
ACACTAACAAGTGGATCCAAATCACGAAATCCCCAGAAAACAAAAGGTACAGATAAGTTAGTGG
GAAGCAGGCCCGCTGCCCTCTCGAAGCTCCTCCCCAACAGTCAAGAACTAAGCAGTACCAGCAG
CTCAGAGGGCGAGAAAGACTCTCCTCCACCAGAGTGGGATGCTGTGCCGGTTCACAAGCCCAGC
AGCTCTACTGACAGTCTTTATAAACTGTCTCTGCAAACACTCAATGCAGACATTTTCTTAAAAC
AACGTCAGACCTCGCCAACACCGGCCTCTCCTCTGCCCACTGCTCCCTGCCCTTTCACATCCCG
TGGCAGCTACAGCAGCGTTGTCAACAGCTCCGGCAGTGACACAAAAGCAAAGCAGCCAAACGGT
AGCAAGAGCAAGCTGACAAAGGCGGCCTCTCTCCCGGGAAAGAACGGCAACCCCACCTTTGCTG
CTGTCGCCGCAGGCTATGACAAGAGCCCAGGTGGGAATGGATTTGCTAAGATCTCGTCAAACAA
ATCAGAGTTTTCCAGCAGCCTTGGCATTTCACACATTCCTGTGGACAGTGATGGCTCTGACAGC
TCGGGTTTGTGGAGTCCTGTCAGCAACCCCAGCAGCCCTGACTTCACCCCCCTCAATTCGTTCT
CAGCCTTTGGGAATTCCTTTAATCTAACGGGTGCAGTTTTCAGCAAACTGTCGCGATCCTGCAG
TCAGTCATCCCAGAGGAGTTGGAATGAGCTCAGCAGCGGCCCCTCCTACCTCTGGGACGCTCCA
GCAGCAGACCCCAGCCCTTCCTGGCCAGTTCCAGCCAGTTCCAGCTCAACAACCCACACAGCCA
CCTCCATCCTGGGCAACACCAGTGGCCTGTGGTCCACCACTCCATTCAGTAGCTCAATCTGGTC
CAGCAACATCAACAGCAACCTTCCGTTCTCCACTCCAACAAACACGCTGTCAGGCATCGGCCTC
ATGGGCACGGAAAACTCCACCCCTGCCCACGCTCCTGCCTCCAGCCCAGCGGATGACTTGGGAC
AGACCTACAACCCCTGGCGGATATGGAGTCCTACGATCGGGAGAAGAAGCTCTGACCCATGGTC
TAATTCACACTTCCCTCATGAAAATTAAAATTAAGCAAAAATCGAAGTGGGGGCCTCTCTAGAT
CATGATCTGCCAGCTTCCCAGCCGTCTGTCCTCTGGAGGCCCTTATGCTCGCCCTCCTCCCCCT
CGCGGGCAGGGCAGCCTTGTCCACTCGCTTCTCTCACGTCTTTCTCGCAATTATGATACCCTGA
GATTTGCTGTTGTGCTTGTAGACAAAAGTCTGGACGCAGCCACAAACTACAACCTGTCATCTGA
AATCTTGACTTTCCAGTTCCCCACCGTCTCTTCCTGCCTTCTTTATCATAAGAACACAAATTTG
GCATTGCAGTTAAGGGAGAAATTTGAACTGATTGACAAGTCCTGGCATGTGACAATTTTACTAA
ATTTACCAAGTTTGGTTTTTAATAATTTCACAATATTATGCGCCAAGATCTAATTTTAAAAATG
TATGAGGACTTTGTGCTGAAAATACAGAGTATTTTTTTAAAGTAAGGCTATCTTGGTTAAAAGC
AGATTACAGAAATGTAAGCCAGCGTAAGAGCAGTGGCTGACGGTAGAGCGCCCGGTGGGAAGGA
ACCACACGCAGCTTCTGTGCTGTGTGTTGAGGTGTGCACATTTGTACACCTGACTTATTTTAAA
GCGAACTGAAATGCACATAGCCAAGTCTTGCATTACAAGATTGTGTATTTCTTAAAATACAACT
TTGTGTTGTACTTTGAAATAAATGATGCTTTTTTCAAAAGCCTTAA

hide sequence

RefSeq Acc Id:

XM_039084533 ⟹ XP_038940461

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	46,516,322 - 46,658,624 (-)	NCBI
mRatBN7.2	9	39,020,471 - 39,162,841 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001414581	(Get FASTA)	NCBI Sequence Viewer
	XP_006244917	(Get FASTA)	NCBI Sequence Viewer
	XP_006244920	(Get FASTA)	NCBI Sequence Viewer
	XP_038940461	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL99253	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000023550.6
	ENSRNOP00000079056
	ENSRNOP00000079056.1
	ENSRNOP00000090966
	ENSRNOP00000090966.1

RefSeq Acc Id:	XP_006244917 ⟸ XM_006244855
- Peptide Label:	isoform X1
- UniProtKB:	A6INF6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGKRAGGGAAAAAASASSGARLEPAAGRGGGPRSAAAGLLGALHLVMTLVVAAARAEKEAFIQS ESIIEVLRFDDGGLLQTETTLGLSSYQQKSISLYRGNCRPIRFEPPMLDFHEQPVGMPKMEKVY LHNPSSEETITLVSISATTSHFHASFFQNRKILPGGNTSFDVVFLARVVGNVENTLFINTSNHG VFTYQVFGVGVPNPYRLRPFLGARVPVNSSFSPVINIHNPHSEPLQVVEMYSSGGDLHLELPTG QQGGTRKLWEIPPYETKGVMRASFSSRDADNHTAFIRIKTNASDSTEFIILPVEVEVTTAPGIY SSTEMLDFGTLRTQDLPKVLNLHLLNSGTKDVPITSVRPTPQNDAITVHFKPVTLKASESKYTK VASISFDASRAKKPSQFSGKITVKAKEKSYSKLEIPYQAEVLDGYLGFDHAATLFHIQDSPADP VERPIYLTNTFSFAILIHDVLLPEEARTMFQVHNFSKPVLILPNESGYIFTLFFMPSTSSMHID NNILLVTNASKFHLPVRVYTGFLDYFVLPPKIEERFIDFGVLSATEASSILFAIINSNPIELAI KSWHIIGDGLSIELVATERGNRSTVIASLPELEKSSLPDQSPVTLASGHFAVFRVKLTAKKLEG VHDGAIQITTDYEILTIPVKAVVAVGSLTCFPKHMVLPPSFPGKIVHQSLNVMNSFSQKVKIQQ IRSLSEDVRFYYRRLRGNREDLEPGKKSKIANIYFDPGLQCGDHCYIGLPFLSKSEPKVQPGVA MQEDLWDADWEAHQSLFKAWMGIKENAGHRLNAMFEVNTDLQKNIISKVSAELSWPSVLSSPRL VRFPLTNTNCSSEEEISVENPADVPVYVQFIPLALYSNPSVFADKLVSRFNLSKVAKLDLRTLE FQVYRNSAHPLQSPTGFTEGLSRHFILNLILKPGEKKSVTVKFTPLHNRTVSSLIIVRNNLTVM DAVMVQGQGTTENLRVAGKLPGPGSSLRFKITEALLKDCIDRLKLREPNFTLKRTFKVENAGHL EIRVETIEISGYACEGYGFKVVNCQEFALSANASRDIVILFTPDFTASRVIRELKFVTSSGSEF VFVLNASLPYHMLAACAEALPRPNWELALYIIISGVMSALFLLVIGTAYLEAQGIWEPFRRRLS FEASNPPFDVGRPFDLRRIVGISSEGNLNTLGCEHSHGRGFYSNSSSRPGTGSHRQCGTSVHPH SSHGSKNSADVDNVRTRNSSSMSSRTSPQAATSQSTSKTSPLVSEAAAATQGHTASRKSKGAKQ GQHNSQHHSHSPLEQHSQPPPPVPQHQEPPPERLSPAPLTHPPHPERASTTRHSSEDSDITSLI EAMDKDFEHHDSPSLDVFTEQPPSPLSKNKGKGKSLQQRKAKPPKKQEEKEKRGKGKPQEEELK DTLADDDSSSTTTETSNPDTEPLLREDTEKHKGRPAMPEKQESELSQGKPKSKKLLNAKKEIPT DVKGGSFELPYTPSLENKQRRSLSKIPLPTTLTSGSKSRNPQKTKGTDKLVGSRPAALSKLLPN SQELSSTSSSEGEKDSPPPEWDAVPVHKPSSSTDSLYKLSLQTLNADIFLKQRQTSPTPASPLP TAPCPFTSRGSYSSVVNSSGSDTKAKQPNGSKSKLTKAASLPGKNGNPTFAAVAAGYDKSPGGN GFAKISSNKSEFSSSLGISHIPVDSDGSDSSGLWSPVSNPSSPDFTPLNSFSAFGNSFNLTGVF SKLSRSCSQSSQRSWNELSSGPSYLWDAPAADPSPSWPVPASSSSTTHTATSILGNTSGLWSTT PFSSSIWSSNINSNLPFSTPTNTLSGIGLMGTENSTPAHAPASSPADDLGQTYNPWRIWSPTIG RRSSDPWSNSHFPHEN hide sequence

RefSeq Acc Id:	XP_006244920 ⟸ XM_006244858
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ACW0 (UniProtKB/TrEMBL), A6INF6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQLEITLDCSTKTRTETTLGLSSYQQKSISLYRGNCRPIRFEPPMLDFHEQPVGMPKMEKVYLH NPSSEETITLVSISATTSHFHASFFQNRKILPGGNTSFDVVFLARVVGNVENTLFINTSNHGVF TYQVFGVGVPNPYRLRPFLGARVPVNSSFSPVINIHNPHSEPLQVVEMYSSGGDLHLELPTGQQ GGTRKLWEIPPYETKGVMRASFSSRDADNHTAFIRIKTNASDSTEFIILPVEVEVTTAPGIYSS TEMLDFGTLRTQDLPKVLNLHLLNSGTKDVPITSVRPTPQNDAITVHFKPVTLKASESKYTKVA SISFDASRAKKPSQFSGKITVKAKEKSYSKLEIPYQAEVLDGYLGFDHAATLFHIQDSPADPVE RPIYLTNTFSFAILIHDVLLPEEARTMFQVHNFSKPVLILPNESGYIFTLFFMPSTSSMHIDNN ILLVTNASKFHLPVRVYTGFLDYFVLPPKIEERFIDFGVLSATEASSILFAIINSNPIELAIKS WHIIGDGLSIELVATERGNRSTVIASLPELEKSSLPDQSPVTLASGHFAVFRVKLTAKKLEGVH DGAIQITTDYEILTIPVKAVVAVGSLTCFPKHMVLPPSFPGKIVHQSLNVMNSFSQKVKIQQIR SLSEDVRFYYRRLRGNREDLEPGKKSKIANIYFDPGLQCGDHCYIGLPFLSKSEPKVQPGVAMQ EDLWDADWEAHQSLFKAWMGIKENAGHRLNAMFEVNTDLQKNIISKVSAELSWPSVLSSPRLVR FPLTNTNCSSEEEISVENPADVPVYVQFIPLALYSNPSVFADKLVSRFNLSKVAKLDLRTLEFQ VYRNSAHPLQSPTGFTEGLSRHFILNLILKPGEKKSVTVKFTPLHNRTVSSLIIVRNNLTVMDA VMVQGQGTTENLRVAGKLPGPGSSLRFKITEALLKDCIDRLKLREPNFTLKRTFKVENAGHLEI RVETIEISGYACEGYGFKVVNCQEFALSANASRDIVILFTPDFTASRVIRELKFVTSSGSEFVF VLNASLPYHMLAACAEALPRPNWELALYIIISGVMSALFLLVIGTAYLEAQGIWEPFRRRLSFE ASNPPFDVGRPFDLRRIVGISSEGNLNTLGCEHSHGRGFYSNSSSRPGTGSHRQCGTSVHPHSS HGSKNSADVDNVRTRNSSSMSSRTSPQAATSQSTSKTSPLVSEAAAATQGHTASRKSKGAKQGQ HNSQHHSHSPLEQHSQPPPPVPQHQEPPPERLSPAPLTHPPHPERASTTRHSSEDSDITSLIEA MDKDFEHHDSPSLDVFTEQPPSPLSKNKGKGKSLQQRKAKPPKKQEEKEKRGKGKPQEEELKDT LADDDSSSTTTETSNPDTEPLLREDTEKHKGRPAMPEKQESELSQGKPKSKKLLNAKKEIPTDV KGGSFELPYTPSLENKQRRSLSKIPLPTTLTSGSKSRNPQKTKGTDKLVGSRPAALSKLLPNSQ ELSSTSSSEGEKDSPPPEWDAVPVHKPSSSTDSLYKLSLQTLNADIFLKQRQTSPTPASPLPTA PCPFTSRGSYSSVVNSSGSDTKAKQPNGSKSKLTKAASLPGKNGNPTFAAVAAGYDKSPGGNGF AKISSNKSEFSSSLGISHIPVDSDGSDSSGLWSPVSNPSSPDFTPLNSFSAFGNSFNLTGAVFS KLSRSCSQSSQRSWNELSSGPSYLWDAPAADPSPSWPVPASSSSTTHTATSILGNTSGLWSTTP FSSSIWSSNINSNLPFSTPTNTLSGIGLMGTENSTPAHAPASSPADDLGQTYNPWRIWSPTIGR RSSDPWSNSHFPHEN hide sequence

Ensembl Acc Id:

ENSRNOP00000023550 ⟸ ENSRNOT00000023550

RefSeq Acc Id:	XP_038940461 ⟸ XM_039084533
- Peptide Label:	isoform X3
- UniProtKB:	A6INF6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000079056 ⟸ ENSRNOT00000112888

Ensembl Acc Id:

ENSRNOP00000090966 ⟸ ENSRNOT00000093761

RefSeq Acc Id:	NP_001414581 ⟸ NM_001427652
- UniProtKB:	A6INF6 (UniProtKB/TrEMBL), A0A8I5ZM29 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000101207 ⟸ ENSRNOT00000126093

Ensembl Acc Id:

ENSRNOP00000108721 ⟸ ENSRNOT00000148628

Protein Domains

TMEM131L fifth Ig-like TMEM131L fourth Ig-like TMEM131L third Ig-like Transmembrane protein 131 second Ig-like Transmembrane protein 131-like N-terminal Transmembrane protein 131-like second Ig-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1M5G8-F1-model_v2	AlphaFold	F1M5G8	1-1814	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1309266	AgrOrtholog
BioCyc Gene	G2FUF-27796	BioCyc
Ensembl Genes	ENSRNOG00000017265	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000023550.8	UniProtKB/TrEMBL
	ENSRNOT00000093761	ENTREZGENE
	ENSRNOT00000093761.1	UniProtKB/TrEMBL
	ENSRNOT00000112888	ENTREZGENE
	ENSRNOT00000112888.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	DUF3651_TMEM131	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_TMEM131_2	UniProtKB/TrEMBL
	Ig_TMEM131L_3	UniProtKB/TrEMBL
	Ig_TMEM131L_4	UniProtKB/TrEMBL
	Ig_TMEM131L_5	UniProtKB/TrEMBL
	TMEM131-like	UniProtKB/TrEMBL
	TMEM131_like_conserved	UniProtKB/TrEMBL
NCBI Gene	316335	ENTREZGENE
PANTHER	PTHR22050	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 131	UniProtKB/TrEMBL
Pfam	DUF3651	UniProtKB/TrEMBL
	Ig_TMEM131_2	UniProtKB/TrEMBL
	Ig_TMEM131L_3	UniProtKB/TrEMBL
	Ig_TMEM131L_4	UniProtKB/TrEMBL
	Ig_TMEM131L_5	UniProtKB/TrEMBL
	TMEM131_like	UniProtKB/TrEMBL
PhenoGen	Tmem131	PhenoGen
RatGTEx	ENSRNOG00000017265	RatGTEx
UniProt	A0A8I5ZM29	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ACW0	ENTREZGENE, UniProtKB/TrEMBL
	A6INF6	ENTREZGENE, UniProtKB/TrEMBL
	F1M5G8_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Tmem131	transmembrane protein 131	LOC102554557	uncharacterized LOC102554557	Data merged from RGD:7677180	737654	PROVISIONAL
2013-12-18	LOC102554557	uncharacterized LOC102554557			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-02-26	Tmem131	transmembrane protein 131	RGD1309266_predicted	similar to RW1 protein (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1309266_predicted	similar to RW1 protein (predicted)	LOC316335_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316335_predicted	similar to RW1 protein (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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