Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cpne9 (copine family member 9) Rattus norvegicus
Analyze
Symbol: Cpne9
Name: copine family member 9
Description: Predicted to have calcium-dependent phospholipid binding activity. Predicted to be involved in cellular response to calcium ion and positive regulation of dendrite extension. Predicted to localize to the plasma membrane. Orthologous to human CPNE9 (copine family member 9); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: copine family member IX; copine IX; copine-9; LOC297516; MGC109370; RGD1309212; similar to copine family member isoform a
Orthologs:
Homo sapiens (human) : CPNE9 (copine family member 9)  HGNC  Alliance
Mus musculus (house mouse) : Cpne9 (copine family member IX)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cpne9 (copine family member 9)
Pan paniscus (bonobo/pygmy chimpanzee) : CPNE9 (copine family member 9)
Canis lupus familiaris (dog) : CPNE9 (copine family member 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cpne9 (copine family member 9)
Sus scrofa (pig) : CPNE9 (copine family member 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04145,238,011 - 145,262,444 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04208,536,038 - 208,559,594 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44149,165,857 - 149,189,090 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14149,410,697 - 149,433,929 (+)NCBI
Celera4134,988,163 - 135,011,651 (+)NCBICelera
Cytogenetic Map4q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cpne9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309212
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.