Gene: Cir1 (corepressor interacting with RBPJ, 1) Rattus norvegicus
Analyze
Symbol: Cir1
Name: corepressor interacting with RBPJ, 1
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription, DNA-templated (ortholog); PARTICIPATES IN Notch signaling pathway; FOUND IN centrosome (ortholog); nuclear speck (ortholog); nucleus (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; bisphenol A; cadmium dichloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 1700023b02rik; CBF1 interacting corepressor; CBF1-interacting corepressor; Cir; corepressor interacting with RBPJ 1; LOC362149; MGC94623; RGD1309199; similar to CBF1 interacting corepressor
Orthologs:
Homo sapiens (human) : CIR1 (corepressor interacting with RBPJ, 1)  HGNC  Alliance
Mus musculus (house mouse) : Cir1 (corepressor interacting with RBPJ, 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cir1 (corepressor interacting with RBPJ, 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CIR1 (corepressor interacting with RBPJ, 1)
Canis lupus familiaris (dog) : CIR1 (corepressor interacting with RBPJ, 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cir1 (corepressor interacting with RBPJ, 1)
Sus scrofa (pig) : CIR1 (corepressor interacting with RBPJ, 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0359,994,547 - 60,023,843 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0366,478,181 - 66,507,756 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4355,789,080 - 55,818,634 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1355,685,451 - 55,715,006 (-)NCBI
Celera357,695,014 - 57,724,195 (-)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cir1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309199
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE