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Gene: Cir1 (corepressor interacting with RBPJ, CIR1) Rattus norvegicus
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Symbol: Cir1
Name: corepressor interacting with RBPJ, CIR1
Description: Predicted to have protein kinase binding activity and transcription corepressor activity. Predicted to be involved in in utero embryonic development and negative regulation of transcription, DNA-templated. Predicted to colocalize with the centrosome. Orthologous to human CIR1 (corepressor interacting with RBPJ, 1); PARTICIPATES IN Notch signaling pathway; INTERACTS WITH amphetamine; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: 1700023b02rik; CBF1 (RBPJ) interacting corepressor 1; CBF1 interacting corepressor; CBF1-interacting corepressor; Cir; corepressor interacting with RBPJ 1; corepressor interacting with RBPJ, 1; LOC362149; MGC94623; RGD1309199; similar to CBF1 interacting corepressor
Orthologs:
Homo sapiens (human) : CIR1 (corepressor interacting with RBPJ, CIR1)  HGNC  Alliance
Mus musculus (house mouse) : Cir1 (corepressor interacting with RBPJ, 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cir1 (corepressor interacting with RBPJ, CIR1)
Pan paniscus (bonobo/pygmy chimpanzee) : CIR1 (corepressor interacting with RBPJ, CIR1)
Canis lupus familiaris (dog) : CIR1 (corepressor interacting with RBPJ, CIR1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cir1 (corepressor interacting with RBPJ, CIR1)
Sus scrofa (pig) : CIR1 (corepressor interacting with RBPJ, CIR1)
Chlorocebus sabaeus (green monkey) : CIR1 (corepressor interacting with RBPJ, CIR1)
Heterocephalus glaber (naked mole-rat) : Cir1 (corepressor interacting with RBPJ, CIR1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0359,994,547 - 60,023,843 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl359,994,181 - 60,023,913 (-)Ensembl
Rnor_5.0366,478,181 - 66,507,756 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4355,789,080 - 55,818,634 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1355,685,451 - 55,715,006 (-)NCBI
Celera357,695,014 - 57,724,195 (-)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Cir1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309199
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-01-28
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.