Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Glis2 (GLIS family zinc finger 2) Rattus norvegicus
Analyze
Symbol: Glis2
Name: GLIS family zinc finger 2
Description: Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including negative regulation of smoothened signaling pathway; positive regulation of protein localization to nucleus; and regulation of transcription, DNA-templated. Predicted to localize to cytoplasm; non-motile cilium; and nuclear speck. Human ortholog(s) of this gene implicated in nephronophthisis 7. Orthologous to human GLIS2 (GLIS family zinc finger 2); INTERACTS WITH 6-propyl-2-thiouracil; all-trans-retinoic acid; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC302946; zinc finger protein GLIS2
Orthologs:
Homo sapiens (human) : GLIS2 (GLIS family zinc finger 2)  HGNC  Alliance
Mus musculus (house mouse) : Glis2 (GLIS family zinc finger 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Glis2 (GLIS family zinc finger 2)
Pan paniscus (bonobo/pygmy chimpanzee) : GLIS2 (GLIS family zinc finger 2)
Canis lupus familiaris (dog) : GLIS2 (GLIS family zinc finger 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Glis2 (GLIS family zinc finger 2)
Sus scrofa (pig) : GLIS2 (GLIS family zinc finger 2)
Chlorocebus sabaeus (African green monkey) : GLIS2 (GLIS family zinc finger 2)
Heterocephalus glaber (naked mole-rat) : Glis2 (GLIS family zinc finger 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01011,154,459 - 11,177,063 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1011,154,658 - 11,174,861 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0109,919,818 - 9,940,224 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41011,080,702 - 11,100,905 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11011,082,230 - 11,102,224 (-)NCBI
Celera109,913,630 - 9,933,828 (-)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Glis2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309177
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.