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Gene: Ifnk (interferon kappa) Rattus norvegicus
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Symbol: Ifnk
Name: interferon kappa
RGD ID: 1309045
Description: Predicted to have cytokine activity and type I interferon receptor binding activity. Predicted to be involved in several processes, including B cell activation; lymphocyte activation involved in immune response; and positive regulation of peptidyl-serine phosphorylation of STAT protein. Predicted to localize to extracellular space. Orthologous to human IFNK (interferon kappa); PARTICIPATES IN cytokine mediated signaling pathway; Jak-Stat signaling pathway; Retinoic acid-inducible gene (RIG) I-like receptor signaling pathway; INTERACTS WITH bisphenol A; cadmium dichloride; trichloroethene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: interferon, kappa; LOC313152
Orthologs:
Homo sapiens (human) : IFNK (interferon kappa)  HGNC  Alliance
Mus musculus (house mouse) : Ifnk (interferon kappa)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ifnk (interferon kappa)
Pan paniscus (bonobo/pygmy chimpanzee) : IFNK (interferon kappa)
Canis lupus familiaris (dog) : IFNK (interferon kappa)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ifnk (interferon kappa)
Sus scrofa (pig) : IFNK (interferon kappa)
Chlorocebus sabaeus (African green monkey) : IFNK (interferon kappa)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0550,631,217 - 50,634,142 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl550,631,217 - 50,634,142 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0555,196,055 - 55,196,631 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4551,803,329 - 51,803,905 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1551,730,233 - 51,804,083 (+)NCBI
Celera548,475,708 - 48,478,169 (+)NCBICelera
Cytogenetic Map5q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ifnk
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309045
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.