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Gene: Scube1 (signal peptide, CUB domain and EGF like domain containing 1) Rattus norvegicus
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Symbol: Scube1
Name: signal peptide, CUB domain and EGF like domain containing 1
Description: Predicted to have identical protein binding activity and protein heterodimerization activity. Predicted to be involved in positive regulation of smoothened signaling pathway and protein homooligomerization. Predicted to localize to the external side of plasma membrane; extracellular space; and extrinsic component of plasma membrane. Orthologous to human SCUBE1 (signal peptide, CUB domain and EGF like domain containing 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; fenarimol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC315174; signal peptide, CUB and EGF-like domain-containing protein 1; signal peptide, CUB domain, EGF-like 1
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.07124,501,988 - 124,620,755 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07124,489,541 - 124,608,699 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47121,631,922 - 121,750,650 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17121,666,488 - 121,784,905 (-)NCBI
Celera7111,073,455 - 111,191,327 (-)NCBICelera
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Scube1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309015
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.