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Gene: Nlrp9 (NLR family, pyrin domain containing 9) Rattus norvegicus
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Symbol: Nlrp9
Name: NLR family, pyrin domain containing 9
RGD ID: 1308981
Description: Predicted to have ATP binding activity. Predicted to be involved in defense response to other organism; positive regulation of interleukin-18 production; and pyroptosis. Predicted to localize to inflammasome complex. Orthologous to human NLRP9 (NLR family pyrin domain containing 9); INTERACTS WITH bisphenol A; vinclozolin; 2,2',4,4',5,5'-hexachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC292577; LOC308329; NACHT, LRR and PYD containing protein 9a; NACHT, LRR and PYD containing protein 9b; NACHT, LRR and PYD domains-containing protein 9; Nalp9a; Nalp9b; NLR family, pyrin domain containing 9B; Nlrp9b
Orthologs:
Homo sapiens (human) : NLRP9 (NLR family pyrin domain containing 9)  HGNC  Alliance
Mus musculus (house mouse) : Nlrp9b (NLR family, pyrin domain containing 9B)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : NLRP9 (NLR family pyrin domain containing 9)
Canis lupus familiaris (dog) : NLRP9 (NLR family pyrin domain containing 9)
Sus scrofa (pig) : NLRP9 (NLR family pyrin domain containing 9)
Chlorocebus sabaeus (African green monkey) : NLRP9 (NLR family pyrin domain containing 9)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0171,859,390 - 71,917,337 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl171,859,390 - 71,909,138 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0173,246,708 - 73,296,649 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,998,708 - 67,067,942 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1167,076,818 - 67,146,053 (-)NCBI
Celera168,750,198 - 68,795,339 (+)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Nlrp9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1308981
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.